RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZNF248Q8NDW4 579 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PDZD8Q8NEN9 1154 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ALKBH8Q96BT7 664 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 HEXIM2Q96MH2 286 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CAMK1GQ96NX5 476 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CLSTN3Q9BQT9 956 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 RPP25Q9BUL9 199 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 DHX36Q9H2U1 1008 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 ADAMTS10Q9H324 1103 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRDM7Q9NQW5 492 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PDGFCQ9NRA1 345 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CNNM1Q9NRU3 951 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 MBD1Q9UIS9 605 aaPredicted RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 KCNH3Q9ULD8 1083 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PALD1Q9ULE6 856 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CNOT6Q9ULM6 557 aaKnown RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PNMA8BQ9ULN7 279 aaPredicted RBP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 CYP8B1Q9UNU6 501 aa2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.64□□□□□ -1.99
TRAV1-1-201ENST00000542354 SCN10AQ9Y5Y9 1956 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATAD5Q96QE3 1844 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 SPEF2Q9C093 1822 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 DENND4AQ7Z401 1863 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 CSMD2Q7Z408 3487 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 LOC105371045A0A1W2PR82 267 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 H3BRB1 525 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 H3BS24 57 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 ETV2O00321 342 aaPredicted RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 EIF1AYO14602 144 aaKnown RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PPFIA2O75334 1257 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 RECQL4O94761 1208 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 MAP4K4O95819 1239 aaPredicted RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 CSF1RP07333 972 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 CHRNB1P11230 501 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 CD99P14209 185 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 EPCAMP16422 314 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 ITGB6P18564 788 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 HOXA5P20719 270 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 IBSPP21815 317 aaPredicted RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 GBP1P32455 592 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PTH1RQ03431 593 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 TMEM62Q0P6H9 643 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 GIT2Q14161 759 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 RTP5Q14D33 572 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 RAB3GAP1Q15042 981 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 SMAD1Q15797 465 aaKnown RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 KIAA1614Q5VZ46 1190 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 TAPT1Q6NXT6 567 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PARM1Q6UWI2 310 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 TMPRSS12Q86WS5 348 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 HID1Q8IV36 788 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 OR6J1Q8NGC5 347 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 BAHD1Q8TBE0 780 aaPredicted RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 ACER1Q8TDN7 264 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 SLC22A17Q8WUG5 538 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 FAM3CQ92520 227 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PIGKQ92643 395 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 FGF14Q92915 247 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PHKBQ93100 1093 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 WDR89Q96FK6 387 aaPredicted RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 KAZALD1Q96I82 304 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 FAM20AQ96MK3 541 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 HSPA12BQ96MM6 686 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 FAM129BQ96TA1 746 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 GTPBP2Q9BX10 602 aaKnown RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PCGF6Q9BYE7 350 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 RHOBTB2Q9BYZ6 727 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 WDR11Q9BZH6 1224 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 EPN3Q9H201 632 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 TUT1Q9H6E5 874 aaKnown RBP2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATP13A1Q9HD20 1204 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 HEBP1Q9NRV9 189 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 GPATCH2Q9NW75 528 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 HYPKQ9NX55 129 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 HDAC6Q9UBN7 1215 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 PCDHA4Q9UN74 947 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 AKAP2Q9Y2D5 859 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 TELO2Q9Y4R8 837 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 WNT6Q9Y6F9 365 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 CLUHO75153 1309 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 UBE4BO95155 1302 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 SDK2Q58EX2 2172 aa2.63□□□□□ -1.99
TRAV1-1-201ENST00000542354 GON4LQ3T8J9 2241 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 A0A0G2JK05 382 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CCDC195A0A1B0GUA6 201 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ANO9A1A5B4 782 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 K7ENP7 123 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 HRKO00198 91 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 VWA5AO00534 786 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 ABLIM1O14639 778 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 NKRFO15226 690 aaKnown RBP eCLIP2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CAND2O75155 1236 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 HPXP02790 462 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 CELA3BP08861 270 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRF1P14222 555 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 JUPP14923 745 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 LAG3P18627 525 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRDX5P30044 214 aa2.62□□□□□ -1.99
TRAV1-1-201ENST00000542354 PRKAR2BP31323 418 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms