RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	GCLM	P48507	274 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	BIRC3	Q13489	604 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	CCDC85B	Q15834	202 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	ZACN	Q401N2	412 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	CCDC40	Q4G0X9	1142 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	C15orf39	Q6ZRI6	1047 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	SV2A	Q7L0J3	742 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	PIK3R5	Q8WYR1	880 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	SENP8	Q96LD8	212 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	TLE6	Q9H808	572 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	RXFP1	Q9HBX9	757 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	METTL14	Q9HCE5	456 aa	Known RBP	13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	SSX2IP	Q9Y2D8	614 aa		13.79	□□□□□ -0.2
RBM28-204	ENST00000478061	KPNA7	A9QM74	516 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	PER2	O15055	1255 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	PHACTR2	O75167	634 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	LETM1	O95202	739 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	VNN1	O95497	513 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	GNA14	O95837	355 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	CNP	P09543	421 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	CA8	P35219	290 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	NRIP1	P48552	1158 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	MARS	P56192	900 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	MYL6	P60660	151 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	HYAL1	Q12794	435 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	SV2C	Q496J9	727 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	DSTYK	Q6XUX3	929 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	RBM23	Q86U06	439 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	IRF2BP1	Q8IU81	584 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	APPL2	Q8NEU8	664 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	MAFA	Q8NHW3	353 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	LNX1	Q8TBB1	728 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	PPP2R3C	Q969Q6	453 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	SLC35C1	Q96A29	364 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	HPDL	Q96IR7	371 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	KLHL5	Q96PQ7	755 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	XYLT2	Q9H1B5	865 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	DNAJC25	Q9H1X3	360 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	SCN1A	P35498	2009 aa		13.78	□□□□□ -0.2
RBM28-204	ENST00000478061	SYCE3	A1L190	88 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	CYB561D2	O14569	222 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TEX28	O15482	410 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	STX10	O60499	249 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	CLASP2	O75122	1294 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	RPL17	P18621	184 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TYMP	P19971	482 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	MYO1E	Q12965	1108 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TRPC3	Q13507	836 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	NCOA4	Q13772	614 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	MRPL58	Q14197	206 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	PSMD5	Q16401	504 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	DUSP6	Q16828	381 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TPD52L1	Q16890	204 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	VARS2	Q5ST30	1063 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TCERG1L	Q5VWI1	586 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	PDXDC1	Q6P996	788 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	ANKS3	Q6ZW76	656 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TRIM59	Q8IWR1	403 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	ENOX1	Q8TC92	643 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	PPM1E	Q8WY54	764 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	FUCA2	Q9BTY2	467 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	EMILIN2	Q9BXX0	1053 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	THAP9	Q9H5L6	903 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	IGFLR1	Q9H665	355 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	MMRN2	Q9H8L6	949 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	TMEM8A	Q9HCN3	771 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	GDAP2	Q9NXN4	497 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	FNIP2	Q9P278	1114 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	MTRR	Q9UBK8	725 aa		13.77	□□□□□ -0.21
RBM28-204	ENST00000478061	ATG2A	Q2TAZ0	1938 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	ARHGEF37	A1IGU5	675 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	ADAM12	O43184	909 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	TBC1D4	O60343	1298 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	OAZ2	O95190	189 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	STAU1	O95793	577 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	HLA-DRA	P01903	254 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	CYP11A1	P05108	521 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	CCDC192	P0DO97	292 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	ODC1	P11926	461 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	ATIC	P31939	592 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	MXI1	P50539	228 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	CREM	Q03060	361 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	COL19A1	Q14993	1142 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	ZSCAN23	Q3MJ62	389 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	WSCD1	Q658N2	575 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	KRT39	Q6A163	491 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	TAS1R2	Q8TE23	839 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	CNOT6L	Q96LI5	555 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	CDCA3	Q99618	268 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	CLSTN3	Q9BQT9	956 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	L1RE1	Q9UN81	338 aa		13.76	□□□□□ -0.21
RBM28-204	ENST00000478061	SNX9	Q9Y5X1	595 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms