RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 ELAC2Q9BQ52 826 aaKnown RBP5.12□□□□□ -1.59
VPS29-202ENST00000447578 TAGLN3Q9UI15 199 aa5.12□□□□□ -1.59
VPS29-202ENST00000447578 INTUQ9ULD6 942 aa5.12□□□□□ -1.59
VPS29-202ENST00000447578 INSL6Q9Y581 213 aa5.12□□□□□ -1.59
VPS29-202ENST00000447578 GPR45Q9Y5Y3 372 aa5.12□□□□□ -1.59
VPS29-202ENST00000447578 RAD54L2Q9Y4B4 1467 aa5.12□□□□□ -1.59
VPS29-202ENST00000447578 NESP48681 1621 aa5.12□□□□□ -1.59
VPS29-202ENST00000447578 COL11A2P13942 1736 aaPredicted RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 DRGXA6NNA5 263 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 MARCH11A6NNE9 402 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 WNT10BO00744 389 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 FOSP01100 380 aaPredicted RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 HLA-DOAP06340 250 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 POU2F2P09086 479 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 SPATA31D3P0C874 917 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 ITGAMP11215 1152 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 AGXTP21549 392 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 MPLP40238 635 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 ADKP55263 362 aaKnown RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 ZNF267Q14586 743 aaPredicted RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 C4orf46Q504U0 113 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 HSP90AB4PQ58FF6 505 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 ABHD17BQ5VST6 288 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 SPATA31D4Q6ZUB0 917 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 CATIPQ7Z7H3 387 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 C11orf96Q7Z7L8 435 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 MORC1Q86VD1 984 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 GLCCI1Q86VQ1 547 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 SLC44A3Q8N4M1 653 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 PPM1NQ8N819 430 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 FAM98AQ8NCA5 519 aaKnown RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 REPS2Q8NFH8 660 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 TAAR9Q96RI9 348 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 STRBPQ96SI9 672 aaKnown RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 QRSL1Q9H0R6 528 aaKnown RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 KCTD10Q9H3F6 313 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 ALG13Q9NP73 1137 aaKnown RBP5.11□□□□□ -1.59
VPS29-202ENST00000447578 DDX21Q9NR30 783 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS29-202ENST00000447578 RNF181Q9P0P0 153 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 CDY2AQ9Y6F7 541 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 FPGT-TNNI3KV9GXZ4 949 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 DNMBPQ6XZF7 1577 aa5.11□□□□□ -1.59
VPS29-202ENST00000447578 ESRRBO95718 433 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 ELANEP08246 267 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 MYBP10242 640 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 OSMP13725 252 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 MTHFD2P13995 350 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 C5AR1P21730 350 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 MTNR1BP49286 362 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 KIF23Q02241 960 aaPredicted RBP5.1□□□□□ -1.59
VPS29-202ENST00000447578 GALEQ14376 348 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 ATAT1Q5SQI0 421 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 TMED8Q6PL24 325 aaPredicted RBP5.1□□□□□ -1.59
VPS29-202ENST00000447578 CHST15Q7LFX5 561 aaPredicted RBP5.1□□□□□ -1.59
VPS29-202ENST00000447578 GRAMD1CQ8IYS0 662 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 SPICE1Q8N0Z3 855 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 BOLLQ8N9W6 283 aaKnown RBP5.1□□□□□ -1.59
VPS29-202ENST00000447578 FBXO18Q8NFZ0 1043 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 ZFP28Q8NHY6 868 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 RSAD2Q8WXG1 361 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 TOPBP1Q92547 1522 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 HPS3Q969F9 1004 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 TNIP3Q96KP6 325 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 MAP3K14Q99558 947 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 ACO2Q99798 780 aaKnown RBP5.1□□□□□ -1.59
VPS29-202ENST00000447578 FAM204AQ9H8W3 233 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 ZNF277Q9NRM2 450 aaPredicted RBP5.1□□□□□ -1.59
VPS29-202ENST00000447578 DNM3Q9UQ16 869 aa5.1□□□□□ -1.59
VPS29-202ENST00000447578 ABCA10Q8WWZ4 1543 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 POLA1P09884 1462 aaPredicted RBP5.09□□□□□ -1.59
VPS29-202ENST00000447578 RRBP1Q9P2E9 1410 aaKnown RBP5.09□□□□□ -1.59
VPS29-202ENST00000447578 CCNB3Q8WWL7 1395 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 PMM2O15305 246 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 NDUFS2O75306 463 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 CFIP05156 583 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 ITGB6P18564 788 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 PDCP20941 246 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 PAX3P23760 479 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 HTR3AP46098 478 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 MEF2AQ02078 507 aaPredicted RBP5.09□□□□□ -1.59
VPS29-202ENST00000447578 SCAPQ12770 1279 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 LLGL1Q15334 1064 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS29-202ENST00000447578 ERCC6LQ2NKX8 1250 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 UAP1L1Q3KQV9 507 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 ZNF362Q5T0B9 420 aaPredicted RBP5.09□□□□□ -1.59
VPS29-202ENST00000447578 AGAP9Q5VTM2 703 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 SP5Q6BEB4 398 aaPredicted RBP5.09□□□□□ -1.59
VPS29-202ENST00000447578 CYB5RLQ6IPT4 315 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 SRGAP1Q7Z6B7 1085 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 GPR149Q86SP6 731 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 FAM43AQ8N2R8 423 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 CAMKK1Q8N5S9 505 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 OR56A1Q8NGH5 318 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 PARD3BQ8TEW8 1205 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 EVI5LQ96CN4 794 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 RAX2Q96IS3 184 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 LRFN3Q9BTN0 628 aa5.09□□□□□ -1.59
VPS29-202ENST00000447578 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
VPS29-202ENST00000447578 WNT8AQ9H1J5 351 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms