RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MRPL46Q9H2W6 279 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 RNPEPQ9H4A4 650 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 NRDE2Q9H7Z3 1164 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 SARS2Q9NP81 518 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 CNNM1Q9NRU3 951 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 FZD1Q9UP38 647 aa4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 USP15Q9Y4E8 981 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 FRMPD2Q68DX3 1309 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-204ENST00000438419 MARCH11A6NNE9 402 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 RNASET2O00584 256 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 PPFIA4O75335 1185 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 AGFG2O95081 481 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 GJB1P08034 283 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 ELANEP08246 267 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MYBP10242 640 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 GRM3Q14832 879 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 UTP14CQ5TAP6 766 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 EMC10Q5UCC4 262 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 TSHZ3Q63HK5 1081 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 NPNTQ6UXI9 565 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 Q6ZPA2 131 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 CHST15Q7LFX5 561 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 KIAA0319LQ8IZA0 1049 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 OR56A1Q8NGH5 318 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 PLBD2Q8NHP8 589 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 HAS1Q92839 578 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 SORCS2Q96PQ0 1159 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MLST8Q9BVC4 326 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 AKIP1Q9NQ31 210 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 KLHL11Q9NVR0 708 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 REXO2Q9Y3B8 237 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 HS3ST4Q9Y661 456 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 TMEM200CA6NKL6 621 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 LPXNO60711 386 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MATN4O95460 622 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZBED1O96006 694 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 CHEK2O96017 543 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 SLPIP03973 132 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 HRGP04196 525 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 RARBP10826 455 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 CACNB3P54284 484 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MXRA7P84157 204 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 SLFN5Q08AF3 891 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 KLF10Q13118 480 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 KIF22Q14807 665 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 BEAN1Q3B7T3 259 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 PPP4R4Q6NUP7 873 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZNF627Q7L945 461 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 PPP1R3BQ86XI6 285 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 LARP4BQ92615 738 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 DDX17Q92841 729 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 TNPO1Q92973 898 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 SCAMP4Q969E2 229 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 TTC17Q96AE7 1141 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MYEOVQ96EZ4 313 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MED15Q96RN5 788 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 PNKPQ96T60 521 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 SIK2Q9H0K1 926 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 ARMT1Q9H993 441 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 GPR35Q9HC97 309 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 SLAMF7Q9NQ25 335 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 ING1Q9UK53 422 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 MAP3K2Q9Y2U5 619 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 PCDHA1Q9Y5I3 950 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 FPGT-TNNI3KV9GXZ4 949 aa4.63□□□□□ -1.67
TRAPPC13-204ENST00000438419 CENPVL1A0A0U1RR11 272 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 A0A1B0GTW7 788 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 PHGDHO43175 533 aaKnown RBP4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 NDUFA10O95299 355 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 GNAI2P04899 355 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 HLA-DOAP06340 250 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 MAKP20794 623 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 PTGS2P35354 604 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 USP14P54578 494 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 TBX4P57082 545 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 NOMO3P69849 1222 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 FAM193AP78312 1265 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 ABHD18Q0P651 414 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 NOMO2Q5JPE7 1267 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 KHDC1LQ5JSQ8 128 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 ARMC6Q6NXE6 501 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 FOXR2Q6PJQ5 311 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 CCDC149Q6ZUS6 474 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 MAEAQ7L5Y9 396 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 FAM43AQ8N2R8 423 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 KLHL32Q96NJ5 620 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 ADAM2Q99965 735 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZSWIM1Q9BR11 485 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 PCED1AQ9H1Q7 454 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 RSAD1Q9HA92 442 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 PIH1D1Q9NWS0 290 aaKnown RBP4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 RNF181Q9P0P0 153 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 SLC45A2Q9UMX9 530 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 L1RE1Q9UN81 338 aa4.62□□□□□ -1.67
TRAPPC13-204ENST00000438419 A0A1W2PPL8 197 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 A6NNZ2 444 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZNF785A8K8V0 405 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms