RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 KIAA1549LQ6ZVL6 1849 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 MYO10Q9HD67 2058 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TMEM200CA6NKL6 621 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PER2O15055 1255 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TNFSF14O43557 240 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 PLA2G6O60733 806 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 ECEL1O95672 775 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 NEFMP07197 916 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 IFIT1P09914 478 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 RLBP1P12271 317 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 ENGP17813 658 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 FUT4P22083 530 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 GPC5P78333 572 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 LMOD3Q0VAK6 560 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 SNW1Q13573 536 aaKnown RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 NXPE4Q6UWF7 544 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TSHZ1Q6ZSZ6 1077 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 CCDC84Q86UT8 332 aaPredicted RBP4.37□□□□□ -1.71
CNGA1-203ENST00000420489 C7orf31Q8N865 590 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 SCFD2Q8WU76 684 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 FAM3CQ92520 227 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 FAM20AQ96MK3 541 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 CWH43Q9H720 699 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 C12orf49Q9H741 205 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 VCPKMTQ9H867 229 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 TRPV4Q9HBA0 871 aa4.37□□□□□ -1.71
CNGA1-203ENST00000420489 CHMLP26374 656 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 ADCY7P51828 1080 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 MGAT3Q09327 533 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 NEXNQ0ZGT2 675 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 RALGPS2Q86X27 583 aaPredicted RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 DHX40Q8IX18 779 aaKnown RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 RPAP2Q8IXW5 612 aaPredicted RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 THNSL1Q8IYQ7 743 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 LRRC47Q8N1G4 583 aaKnown RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 SLC39A11Q8N1S5 342 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 EXD3Q8N9H8 876 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 PHKBQ93100 1093 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 LURAP1Q96LR2 239 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 TMEM117Q9H0C3 514 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 SUSD2Q9UGT4 822 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 CDH23Q9H251 3354 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 KDM3AQ9Y4C1 1321 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 ANKRD62A6NC57 917 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 APBB3O95704 486 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 GYG1P46976 350 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 CLCN4P51793 760 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 RPS26P62854 115 aaKnown RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 NFATC3Q12968 1075 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 PTPAQ15257 358 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 LINC00303Q3SY05 128 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 PLPP4Q5VZY2 271 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 ZNF662Q6ZS27 426 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 HDXQ7Z353 690 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 ATG4DQ86TL0 474 aaPredicted RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 FTSJ3Q8IY81 847 aaKnown RBP4.36□□□□□ -1.71
CNGA1-203ENST00000420489 POU5F2Q8N7G0 328 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 GPBAR1Q8TDU6 330 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 ASB11Q8WXH4 323 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 ATG4CQ96DT6 458 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 TMEM260Q9NX78 707 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 TSPYL4Q9UJ04 414 aa4.36□□□□□ -1.71
CNGA1-203ENST00000420489 HECTD1Q9ULT8 2610 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 ZBED4O75132 1171 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 CEACAM5P06731 702 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 CSTF2P33240 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
CNGA1-203ENST00000420489 BTDP43251 543 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 CLCN7P51798 805 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 FAM189BP81408 668 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 EGFLAMQ63HQ2 1017 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 TAF2Q6P1X5 1199 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 C22orf34Q6ZV56 151 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 C3orf58Q8NDZ4 430 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 OLIG1Q8TAK6 271 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 ISL2Q96A47 359 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 CFAP53Q96M91 514 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 MRPL9Q9BYD2 267 aaKnown RBP4.35□□□□□ -1.71
CNGA1-203ENST00000420489 TNKS2Q9H2K2 1166 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 RXFP1Q9HBX9 757 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 FAM53CQ9NYF3 392 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 ATG2BQ96BY7 2078 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 TEX15Q9BXT5 2789 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 MYF5P13349 255 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 BMP6P22004 513 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 EIF4BP23588 611 aaKnown RBP4.35□□□□□ -1.71
CNGA1-203ENST00000420489 EDNRBP24530 442 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 MAPK8P45983 427 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 GFPT1Q06210 699 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-203ENST00000420489 PLCL1Q15111 1095 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 DGKDQ16760 1214 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 USH1GQ495M9 461 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 HSF5Q4G112 596 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-203ENST00000420489 FBXO43Q4G163 708 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 CAPRIN2Q6IMN6 1127 aaKnown RBP4.35□□□□□ -1.71
CNGA1-203ENST00000420489 RSPH3Q86UC2 560 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 SLCO6A1Q86UG4 719 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 NME8Q8N427 588 aa4.35□□□□□ -1.71
CNGA1-203ENST00000420489 KAT2BQ92831 832 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms