RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 C1RP00736 705 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 GNAQP50148 359 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 RAB33AQ14088 237 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 HSP90AA2PQ14568 343 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 UAP1L1Q3KQV9 507 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 LYPD4Q6UWN0 246 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 CACNA2D4Q7Z3S7 1137 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 MICU3Q86XE3 530 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 PROSER1Q86XN7 944 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 TICAM2Q86XR7 235 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 CHCHD4Q8N4Q1 142 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 FANCBQ8NB91 859 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 RSPH1Q8WYR4 309 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 GTSE1Q9NYZ3 720 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 GDE1Q9NZC3 331 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 COL4A3BPQ9Y5P4 624 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 CDY1Q9Y6F8 540 aa9.63□□□□□ -0.87
NIF3L1-206ENST00000416651 PCNX2A6NKB5 2137 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 CCDC69A6NI79 296 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 HEPACAM2A8MVW5 462 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 PTGESO14684 152 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 FOXD2O60548 495 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 C1QL1O75973 258 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 CCDC192P0DO97 292 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 PSMC3P17980 439 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 CTSOP43234 321 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 CREB5Q02930 508 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 TNK2Q07912 1038 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 LAMTOR4Q0VGL1 99 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 AP3B2Q13367 1082 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 CCINQ13939 588 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 SART3Q15020 963 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 NAB2Q15742 525 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 INTS6LQ5JSJ4 861 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 STXBP5Q5T5C0 1151 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 NAIF1Q69YI7 327 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 TMEM130Q8N3G9 435 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 LOXL4Q96JB6 756 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 TCEANC2Q96MN5 208 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 HHIPQ96QV1 700 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 IER2Q9BTL4 223 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 INO80BQ9C086 356 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 FSCN3Q9NQT6 498 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 VPS45Q9NRW7 570 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 MSRB2Q9Y3D2 182 aa9.62□□□□□ -0.87
NIF3L1-206ENST00000416651 NUP205Q92621 2012 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 PLXNB3Q9ULL4 1909 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 SPECC1L-ADORA2AF8WAN1 911 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 EML1O00423 815 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 ZNF263O14978 683 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 NPTXRO95502 500 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 CAVIN2O95810 425 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 PTPN2P17706 415 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 CDC27P30260 824 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 BRCC3P46736 316 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 DNM2P50570 870 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 IRX4P78413 519 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 SCAPQ12770 1279 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 TEAD2Q15562 447 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 XKR3Q5GH77 459 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 B3GNT9Q6UX72 402 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 MIER3Q7Z3K6 550 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 GPR65Q8IYL9 337 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 RNF149Q8NC42 400 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 SLC5A5Q92911 643 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 CHFRQ96EP1 664 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 LRIG1Q96JA1 1093 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 CSRNP2Q9H175 543 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 FBRSL1Q9HCM7 1045 aaKnown RBP9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 CEP72Q9P209 647 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 PARP2Q9UGN5 583 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 NEUROG3Q9Y4Z2 214 aa9.61□□□□□ -0.87
NIF3L1-206ENST00000416651 APC2O95996 2303 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 BCLAF3A2AJT9 711 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 MEFVO15553 781 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 GAS7O60861 476 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 PSMD10O75832 226 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 POU2F2P09086 479 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 CEACAM1P13688 526 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 GSPT1P15170 499 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 U2AF2P26368 475 aaKnown RBP eCLIP9.6□□□□□ -0.871e-6■□□□□ 9.2
NIF3L1-206ENST00000416651 HOXA6P31267 233 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 CIITAP33076 1130 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 KPNA1P52294 538 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 FGD1P98174 961 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 LARP1BQ659C4 914 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 SRGAP1Q7Z6B7 1085 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 MARCH9Q86YJ5 346 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 MFSD6LQ8IWD5 586 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 ZSCAN18Q8TBC5 510 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-206ENST00000416651 MDM1Q8TC05 714 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms