RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CCHCR1Q8TD31 782 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 C10orf71Q711Q0 1435 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 RPS6KA5O75582 802 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 NOL4O94818 638 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 ZBED1O96006 694 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 GJB1P08034 283 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 PDGFRAP16234 1089 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 PLA2G4AP47712 749 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 GCNT1Q02742 428 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 MICALL1Q8N3F8 863 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 BSNDQ8WZ55 320 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 LRFN2Q9ULH4 789 aa14.87□□□□□ -0.03
SCAF4-202ENST00000399804 TAP1Q03518 808 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 BRSK2Q8IWQ3 736 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 UPF1Q92900 1129 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 DPP3Q9NY33 737 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 CACNA1SQ13698 1873 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 A0A0A6YYK5 440 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 HOXD10P28358 340 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 CYP2C19P33261 490 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 CDH6P55285 790 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 BEND6Q5SZJ8 279 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 ZSWIM1Q9BR11 485 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 OSBPL8Q9BZF1 889 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 TTYH3Q9C0H2 523 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 ANKZF1Q9H8Y5 726 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 INTS9Q9NV88 658 aaKnown RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 TAS2R14Q9NYV8 317 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 ZNF263O14978 683 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 DHX15O43143 795 aaKnown RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 MAFO75444 373 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 CALCAP01258 141 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 EIF3BP55884 814 aaKnown RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 DAW1Q8N136 415 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 ARHGEF26Q96DR7 871 aa14.86□□□□□ -0.03
SCAF4-202ENST00000399804 GPBP1L1Q9HC44 474 aaPredicted RBP14.86□□□□□ -0.03
SCAF4-202ENST00000399804 KRT17Q04695 432 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 TTC13Q8NBP0 860 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 RAET1EQ8TD07 263 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 TNIP3Q96KP6 325 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 TINF2Q9BSI4 451 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 WDR35Q9P2L0 1181 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 MYH6P13533 1939 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 SOWAHBA6NEL2 793 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 LCP1P13796 627 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 EPS8L1Q8TE68 723 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 HNRNPLLQ8WVV9 542 aaKnown RBP14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PPME1Q9Y570 386 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PCDHA2Q9Y5H9 948 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 COMMD10Q9Y6G5 202 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 LRP5O75197 1615 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 GOLGA8MH3BSY2 632 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PHF2O75151 1096 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 SREBF2Q12772 1141 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 AMHR2Q16671 573 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 NOL9Q5SY16 702 aaKnown RBP14.85□□□□□ -0.03
SCAF4-202ENST00000399804 CREG2Q8IUH2 290 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PDIK1LQ8N165 341 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 ATL2Q8NHH9 583 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 ZNF606Q8WXB4 792 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 FUT8Q9BYC5 575 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 SAYSD1Q9NPB0 183 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 LCMT1Q9UIC8 334 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PDE2AO00408 941 aaPredicted RBP14.85□□□□□ -0.03
SCAF4-202ENST00000399804 RAP1GAPP47736 663 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 CCT5P48643 541 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 PMS2P54278 862 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 RTP1P59025 263 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 GPS1Q13098 491 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 HP1BP3Q5SSJ5 553 aaPredicted RBP14.85□□□□□ -0.03
SCAF4-202ENST00000399804 WDR93Q6P2C0 686 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 JAMLQ86YT9 394 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 APPL2Q8NEU8 664 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 TMEM134Q9H6X4 195 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
SCAF4-202ENST00000399804 MYO5AQ9Y4I1 1855 aaKnown RBP14.85□□□□□ -0.03
SCAF4-202ENST00000399804 ARHGEF37A1IGU5 675 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 KRT14P02533 472 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 HGSNATQ68CP4 663 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 SLC13A5Q86YT5 568 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-202ENST00000399804 SREK1Q8WXA9 508 aaKnown RBP14.84□□□□□ -0.03
SCAF4-202ENST00000399804 C17orf102A2RUQ5 167 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 HMGB1P1B2RPK0 211 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-202ENST00000399804 CD4P01730 458 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-202ENST00000399804 HDAC7Q8WUI4 952 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 DDX56Q9NY93 547 aaKnown RBP14.84□□□□□ -0.03
SCAF4-202ENST00000399804 EXOC1LA0A1B0GW35 172 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 MAPK13O15264 365 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 CDH8P55286 799 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 BCAR1P56945 870 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 PDCLQ13371 301 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 CLEC16AQ2KHT3 1053 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 SMTNL2Q2TAL5 461 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 SCN4BQ8IWT1 228 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
SCAF4-202ENST00000399804 ACSF2Q96CM8 615 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms