RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
CPSF7-202ENST00000394888 TMEM191BP0C7N4 346 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-202ENST00000394888 MCL1Q07820 350 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 GRM1Q13255 1194 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 SNX1Q13596 522 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 Q3C1V9 767 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 VSTM1Q6UX27 236 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 ZNF606Q8WXB4 792 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 C11orf70Q9BRQ4 267 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 MSTO1Q9BUK6 570 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 GNA15P30679 374 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 EXOC3L1Q86VI1 746 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 CYP4X1Q8N118 509 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 BICD1Q96G01 975 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 ANKFY1Q9P2R3 1169 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 CTNNAL1Q9UBT7 734 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 LRRIQ4A6NIV6 560 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 K7ERI5 159 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 SLC1A1P43005 524 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 MTMR12Q9C0I1 747 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 SPATC1LQ9H0A9 340 aa16.38■□□□□ 0.21
CPSF7-202ENST00000394888 PPANQ9NQ55 473 aaKnown RBP16.38■□□□□ 0.21
CPSF7-202ENST00000394888 OAS1P00973 400 aaKnown RBP16.37■□□□□ 0.21
CPSF7-202ENST00000394888 TNNI1P19237 187 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 MAN1A1P33908 653 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 RFC5P40937 340 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 PRKG1Q13976 671 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 ZPBP2Q6X784 338 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 SDCBP2Q9H190 292 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 DNM1LO00429 736 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 PSTPIP1O43586 416 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 FSBPO95073 299 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 CHN1P15882 459 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
CPSF7-202ENST00000394888 NCOA4Q13772 614 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 RELL1Q8IUW5 271 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 GPC2Q8N158 579 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 CLMNQ96JQ2 1002 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 SCN1AP35498 2009 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 ADM5C9JUS6 153 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 E7EVH7 732 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 EBAG9O00559 213 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 B4GALT5O43286 388 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 MYL6P60660 151 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 LINC01465Q8N7H1 131 aa16.37■□□□□ 0.21
CPSF7-202ENST00000394888 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
CPSF7-202ENST00000394888 LAMTOR4Q0VGL1 99 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 SGO2Q562F6 1265 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 CCDC105Q8IYK2 499 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 CEP120Q8N960 986 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 C3orf20Q8ND61 904 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 XPO6Q96QU8 1125 aaKnown RBP16.36■□□□□ 0.21
CPSF7-202ENST00000394888 WDR83Q9BRX9 315 aaKnown RBP16.36■□□□□ 0.21
CPSF7-202ENST00000394888 CENPHQ9H3R5 247 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 H0YCG3 227 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 ECEL1O95672 775 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 ITGA8P53708 1063 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 PIGWQ7Z7B1 504 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 WDR49Q8IV35 697 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 UHMK1Q8TAS1 419 aaKnown RBP16.36■□□□□ 0.21
CPSF7-202ENST00000394888 SLITRK1Q96PX8 696 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
CPSF7-202ENST00000394888 A0A087WUV0 522 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-202ENST00000394888 NF2P35240 595 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 AMHR2Q16671 573 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 HIBCHQ6NVY1 386 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-202ENST00000394888 METTL7BQ6UX53 244 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 TRAPPC12Q8WVT3 735 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 HEMGNQ9BXL5 484 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 KLHL11Q9NVR0 708 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 TCEAL9Q9UHQ7 104 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 CD58P19256 250 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 ABCD1P33897 745 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 PLCB4Q15147 1175 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 FAM81BQ96LP2 452 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-202ENST00000394888 BCCIPQ9P287 314 aaKnown RBP eCLIP16.35■□□□□ 0.21
CPSF7-202ENST00000394888 PCDHB4Q9Y5E5 795 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 PASKQ96RG2 1323 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 F8VP50 259 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 PGK2P07205 417 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 STAT5BP51692 787 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 CNGA2Q16280 664 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 TAZQ16635 292 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 SLFN12LQ6IEE8 588 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 CYP4V2Q6ZWL3 525 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-202ENST00000394888 FZD8Q9H461 694 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 NINJ2Q9NZG7 142 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 RASAL2Q9UJF2 1139 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
CPSF7-202ENST00000394888 TCEA3O75764 348 aa16.34■□□□□ 0.21
CPSF7-202ENST00000394888 BRD2P25440 801 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms