RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FBXO16Q8IX29 292 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 TSEN2Q8NCE0 465 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SEPT1Q8WYJ6 367 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 HAS1Q92839 578 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SNF8Q96H20 258 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 LRRC37BQ96QE4 947 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 MOV10L1Q9BXT6 1211 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 UNKQ9C0B0 810 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 TRABDQ9H4I3 376 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SLITRK6Q9H5Y7 841 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 NEU2Q9Y3R4 380 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 VTNP04004 478 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 TCF7P36402 384 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 HIF1AQ16665 826 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ANO4Q32M45 955 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 PHLDB3Q6NSJ2 640 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 WDR59Q6PJI9 974 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 LRRC31Q6UY01 552 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ARHGEF19Q8IW93 802 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ATL2Q8NHH9 583 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ZNF507Q8TCN5 953 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 PRPF31Q8WWY3 499 aaKnown RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 ARHGEF26Q96DR7 871 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SPDL1Q96EA4 605 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 APOL2Q9BQE5 337 aa9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SAE1Q9UBE0 346 aaPredicted RBP9.61□□□□□ -0.87
SMARCA1-202ENST00000371122 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 PPP1R12AO14974 1030 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 KRT37O76014 449 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 ITGB3P05106 788 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 TBX2Q13207 712 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 THOC5Q13769 683 aaKnown RBP9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 C3orf62Q6ZUJ4 267 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 NETO2Q8NC67 525 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SPATA18Q8TC71 538 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 KRT35Q92764 455 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 ZDHHC15Q96MV8 337 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 PWWP2AQ96N64 755 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 KLC2Q9H0B6 622 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 PRDM5Q9NQX1 630 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 LCMT1Q9UIC8 334 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC4A7Q9Y6M7 1214 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 LPXNO60711 386 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 CALB1P05937 261 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC15A2Q16348 729 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 MUM1L1Q5H9M0 696 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 HEATR6Q6AI08 1181 aaKnown RBP9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SGF29Q96ES7 293 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 FAM161BQ96MY7 647 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 TMEM121Q9BTD3 319 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 TRIM55Q9BYV6 548 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 ECT2Q9H8V3 914 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 PARVAQ9NVD7 372 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 DDX3XO00571 662 aaKnown RBP eCLIP9.6□□□□□ -0.877e-23■□□□□ 10.3
SMARCA1-202ENST00000371122 MAPK13O15264 365 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 HSPA4LO95757 839 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 VCAM1P19320 739 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 OCRLQ01968 901 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 GJC2Q5T442 439 aaPredicted RBP9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC35C1Q96A29 364 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 ANLNQ9NQW6 1124 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 ASNSD1Q9NWL6 643 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 IP6K2Q9UHH9 426 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 ZFP69BQ9UJL9 534 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 SUGT1Q9Y2Z0 365 aa9.6□□□□□ -0.87
SMARCA1-202ENST00000371122 RIC1Q4ADV7 1423 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MEFVO15553 781 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 XPOTO43592 962 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 KLRC4O43908 158 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 DDNO94850 711 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 TYK2P29597 1187 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SREBF1P36956 1147 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 LY6KQ17RY6 165 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ILDR2Q71H61 639 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 TTC30BQ8N4P2 665 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 IL31RAQ8NI17 732 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SYTL5Q8TDW5 730 aaPredicted RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ATP8B4Q8TF62 1192 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 PGBD4Q96DM1 585 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 CPB2Q96IY4 423 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 METTL5Q9NRN9 209 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 PCDHB2Q9Y5E7 798 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 IQANK1A0A1B0GTG1 560 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 F8VZ95 297 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 TBX3O15119 743 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 TMEM253P0C7T8 217 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MYBL1P10243 752 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 CYP11B1P15538 503 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC8A1P32418 973 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MYL6P60660 151 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 COG7P83436 770 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 NSUN2Q08J23 767 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 BYSLQ13895 437 aaKnown RBP9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 TFDP2Q14188 446 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 DBN1Q16643 649 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 MROH9Q5TGP6 573 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 ARMCX2Q7L311 632 aa9.59□□□□□ -0.87
SMARCA1-202ENST00000371122 SLC13A5Q86YT5 568 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms