RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SPRYD7Q5W111 196 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 PLEKHH3Q7Z736 793 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 CD302Q8IX05 232 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ZNF606Q8WXB4 792 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ZIM3Q96PE6 472 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 C16orf70Q9BSU1 422 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ERVK-5Q9HDB9 667 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 SLC5A4Q9NY91 659 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 PODXLO00592 558 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 DAPK3O43293 454 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 PROSCO94903 275 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 DRG2P55039 364 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 PTP4A2Q12974 167 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 MTMR3Q13615 1198 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 DUSP28Q4G0W2 176 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 PLEKHA7Q6IQ23 1121 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ADAT2Q7Z6V5 191 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 MAML3Q96JK9 1138 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 C11orf70Q9BRQ4 267 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ERP44Q9BS26 406 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 CELF4Q9BZC1 486 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ZNF518BQ9C0D4 1074 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 ABHD16BQ9H3Z7 469 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 MINDY3Q9H8M7 445 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 CISHQ9NSE2 258 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 AKT3Q9Y243 479 aa19.49■□□□□ 0.71
PDLIM7-203ENST00000359895 A0A087WZ62 844 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 H3BRB1 525 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 CALB1P05937 261 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 HOXD8P13378 290 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 MKRN3Q13064 507 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 DUPD1Q68J44 220 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 IQSEC1Q6DN90 963 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 AADACL2Q6P093 401 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 MTHFD1LQ6UB35 978 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 LRIG3Q6UXM1 1119 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 PRELID2Q8N945 189 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 C12orf50Q8NA57 414 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 RIN2Q8WYP3 895 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 MAGOHBQ96A72 148 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 ZNF668Q96K58 619 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 PKNOX2Q96KN3 472 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 FDXACB1Q9BRP7 624 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 TUT1Q9H6E5 874 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 PARVAQ9NVD7 372 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 CITO14578 2027 aa19.48■□□□□ 0.71
PDLIM7-203ENST00000359895 GOLGA6CA6NDK9 693 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 SLC15A5A6NIM6 579 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 ERLIN2O94905 339 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 ZNF286BP0CG31 522 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 GOLGA6DP0CG33 693 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 MAN1A1P33908 653 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 DDX42Q86XP3 938 aaKnown RBP eCLIP19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 JAMLQ86YT9 394 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 PASD1Q8IV76 773 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 TMEM35BQ8NCS4 154 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 FAM76AQ8TAV0 307 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 TINF2Q9BSI4 451 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 XYLT2Q9H1B5 865 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 ASB7Q9H672 318 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 GOLGA6AQ9NYA3 693 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 PCDHGC3Q9UN70 934 aa19.47■□□□□ 0.71
PDLIM7-203ENST00000359895 GPR25O00155 361 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 FSCN2O14926 492 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 PSTPIP1O43586 416 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 MMP3P08254 477 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 CFHP08603 1231 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 IQCF3P0C7M6 154 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 STAG3L1P0CL83 205 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 CXCL8P10145 99 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 PTGIRP43119 386 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 LMAN1P49257 510 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 FNTAP49354 379 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 OSTNP61366 133 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 MAMLD1Q13495 774 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 IRF5Q13568 498 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 ACVR2BQ13705 512 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 AMHR2Q16671 573 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 DGKDQ16760 1214 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 SPDYCQ5MJ68 293 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 MMS22LQ6ZRQ5 1243 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 CPNE8Q86YQ8 564 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 C1orf131Q8NDD1 294 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 OR6J1Q8NGC5 347 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 ZBTB9Q96C00 473 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 ZBTB10Q96DT7 871 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 TRIM51Q9BSJ1 452 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 DPH5Q9H2P9 285 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 PARP2Q9UGN5 583 aa19.46■□□□□ 0.71
PDLIM7-203ENST00000359895 RALGAPA2Q2PPJ7 1873 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 CD58P19256 250 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 MMP8P22894 467 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 ATICP31939 592 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 CDH5P33151 784 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 ASPAP45381 313 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 TAP1Q03518 808 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 ZNF667Q5HYK9 610 aa19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 CCDC137Q6PK04 289 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-203ENST00000359895 ZNF410Q86VK4 478 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms