RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TSR1Q2NL82 804 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 WDR44Q5JSH3 913 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 RSRC2Q7L4I2 434 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 FAM71AQ8IYT1 594 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ATRIPQ8WXE1 791 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 SCLYQ96I15 445 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 SYT11Q9BT88 431 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 HIPK3Q9H422 1215 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 HAUS4Q9H6D7 363 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 RGS18Q9NS28 235 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ZNHIT6Q9NWK9 470 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 PPP2R2CQ9Y2T4 447 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 EPN1Q9Y6I3 576 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 CCDC151A5D8V7 595 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 NDUFA10O95299 355 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 TUBBP07437 444 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 POLR2BP30876 1174 aaKnown RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 MFAP3P55082 362 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 PTK2Q05397 1052 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ASIC2Q16515 512 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ZNF571Q7Z3V5 609 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-201ENST00000343575 UBE2Q1Q7Z7E8 422 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 UBR7Q8N806 425 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 DBF4BQ8NFT6 615 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 GAD1Q99259 594 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ACP6Q9NPH0 428 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 C1orf112Q9NSG2 853 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 ADGRG1Q9Y653 693 aa15.76■□□□□ 0.11
CXCL12-201ENST00000343575 TANC1Q9C0D5 1861 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 SSU72P8A0A1W2PR75 194 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 KRT19P08727 400 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ITGA4P13612 1032 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 CYP2C18P33260 490 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 MLH1P40692 756 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ASPAP45381 313 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 FAM189BP81408 668 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 TRPC3Q13507 836 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 CUL2Q13617 745 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ECHDC2Q86YB7 292 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 LRRN4CLQ8ND94 238 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ACRBPQ8NEB7 543 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
CXCL12-201ENST00000343575 PPP1R10Q96QC0 940 aaKnown RBP15.75■□□□□ 0.11
CXCL12-201ENST00000343575 PPP1R12CQ9BZL4 782 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-201ENST00000343575 VRTNQ9H8Y1 702 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ITGA11Q9UKX5 1188 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 AGAP1Q9UPQ3 857 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ATP11BQ9Y2G3 1177 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 MRFAP1Q9Y605 127 aa15.75■□□□□ 0.11
CXCL12-201ENST00000343575 ANO9A1A5B4 782 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 ARL5CA6NH57 179 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 IGFBP6P24592 240 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-201ENST00000343575 ITGB8P26012 769 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 RAB27AP51159 221 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 CCL23P55773 120 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 KLHL30Q0D2K2 578 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 TMEM106CQ9BVX2 250 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 GOLGA2P5Q9HBQ8 144 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 PCDH10Q9P2E7 1040 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 POLIQ9UNA4 740 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 CYP26A1O43174 497 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 CXCL10P02778 98 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 FERP16591 822 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 OAS2P29728 719 aaKnown RBP15.74■□□□□ 0.11
CXCL12-201ENST00000343575 ZNF699Q32M78 642 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 ENOSF1Q7L5Y1 443 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 CCDC170Q8IYT3 715 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 IPO4Q8TEX9 1081 aaKnown RBP15.74■□□□□ 0.11
CXCL12-201ENST00000343575 TAF4BQ92750 862 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 TSPAN18Q96SJ8 248 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 SDCBP2Q9H190 292 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 UBQLN1Q9UMX0 589 aaKnown RBP15.74■□□□□ 0.11
CXCL12-201ENST00000343575 CNTN6Q9UQ52 1028 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 GIT1Q9Y2X7 761 aa15.74■□□□□ 0.11
CXCL12-201ENST00000343575 A0A087X0T9 212 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 PIRO00625 290 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 LCA5LO95447 670 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 ABL1P00519 1130 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 CALCAP01258 141 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 IVLP07476 585 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 FAM228BP0C875 321 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 CAPN2P17655 700 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 EN2P19622 333 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-201ENST00000343575 KIF11P52732 1056 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 RBP5P82980 135 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 CYP27A1Q02318 531 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 TDRD12Q587J7 1177 aaKnown RBP15.73■□□□□ 0.11
CXCL12-201ENST00000343575 C9orf57Q5W0N0 161 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 SLC24A5Q71RS6 500 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 HPDLQ96IR7 371 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 CCDC42Q96M95 316 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 BCO2Q9BYV7 579 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 NIF3L1Q9GZT8 377 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 CACNG4Q9UBN1 327 aa15.73■□□□□ 0.11
CXCL12-201ENST00000343575 FEZ2Q9UHY8 353 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-201ENST00000343575 TRIM43BA6NCK2 446 aa15.72■□□□□ 0.11
CXCL12-201ENST00000343575 EIF3CLB5ME19 914 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms