RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 FAM126BQ8IXS8 530 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 C18orf25Q96B23 403 aaPredicted RBP18.57■□□□□ 0.56
CLDN4-201ENST00000340958 TSPAN18Q96SJ8 248 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 ADAM2Q99965 735 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 OSBPL7Q9BZF2 842 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 XYLT2Q9H1B5 865 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 CXCL16Q9H2A7 254 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 TRIM10Q9UDY6 481 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 NAGPAQ9UK23 515 aa18.57■□□□□ 0.56
CLDN4-201ENST00000340958 RANBP2P49792 3224 aaKnown RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 MACROD2A1Z1Q3 448 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 DDX3XO00571 662 aaKnown RBP eCLIP18.56■□□□□ 0.563e-9■■□□□ 13.2
CLDN4-201ENST00000340958 CD4P01730 458 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 WEE2P0C1S8 567 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 SKIP12755 728 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 SELPP16109 830 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 ATF7P17544 494 aaPredicted RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 ARHGAP25P42331 645 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 NAB2Q15742 525 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 ZNF569Q5MCW4 686 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 TMEM130Q8N3G9 435 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 MMS19Q96T76 1030 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 ACP6Q9NPH0 428 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 TUBGCP4Q9UGJ1 667 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 POLIQ9UNA4 740 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 ANK1P16157 1881 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 CASQ1P31415 396 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 PRPF38BQ5VTL8 546 aaKnown RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 NOP9Q86U38 636 aaKnown RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 RBBP8NLQ8NC74 664 aaPredicted RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 EPS8L1Q8TE68 723 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 IRX2Q9BZI1 471 aaPredicted RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 LACRTQ9GZZ8 138 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 CISHQ9NSE2 258 aa18.56■□□□□ 0.56
CLDN4-201ENST00000340958 ZMYND8Q9ULU4 1186 aaPredicted RBP18.56■□□□□ 0.56
CLDN4-201ENST00000340958 CITO14578 2027 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 KCNE1P15382 129 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 SYN1P17600 705 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 ASPAP45381 313 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 TLE2Q04725 743 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 ZNF662Q6ZS27 426 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 LNX1Q8TBB1 728 aaPredicted RBP18.55■□□□□ 0.56
CLDN4-201ENST00000340958 LPPQ93052 612 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 SECISBP2LQ93073 1101 aaKnown RBP18.55■□□□□ 0.56
CLDN4-201ENST00000340958 PGBD4Q96DM1 585 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 PAXBP1Q9Y5B6 917 aa18.55■□□□□ 0.56
CLDN4-201ENST00000340958 RCCD1A6NED2 376 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 DCDC2CA8MYV0 355 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 ABL1P00519 1130 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 MMEP08473 750 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 ACO1P21399 889 aaKnown RBP18.54■□□□□ 0.56
CLDN4-201ENST00000340958 GNA15P30679 374 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 MLH1P40692 756 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 CDR2Q01850 454 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 ZNF394Q53GI3 561 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 ZFP42Q96MM3 310 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 MYO1AQ9UBC5 1043 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 LTBP2Q14767 1821 aa18.54■□□□□ 0.56
CLDN4-201ENST00000340958 FAM170AA1A519 330 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 MGEA5O60502 916 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 H2AFZP0C0S5 128 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 RAP1GAPP47736 663 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 ZBTB6Q15916 424 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 H2AFVQ71UI9 128 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 ANKRD33Q7Z3H0 272 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 SLC30A5Q8TAD4 765 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 FAXDC2Q96IV6 333 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 GAD1Q99259 594 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 SLC38A7Q9NVC3 462 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 NOCTQ9UK39 431 aaKnown RBP18.53■□□□□ 0.56
CLDN4-201ENST00000340958 GIT1Q9Y2X7 761 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 DUSP10Q9Y6W6 482 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 A0A0U1RQF3 1178 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 THAP12O43422 761 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 CALCAP01258 141 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 TERF1P54274 439 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 XKR4Q5GH76 650 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 C9orf57Q5W0N0 161 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 ZNF677Q86XU0 584 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 CXorf38Q8TB03 319 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 ZNF560Q96MR9 790 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 PACSIN1Q9BY11 444 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 VRTNQ9H8Y1 702 aa18.53■□□□□ 0.56
CLDN4-201ENST00000340958 MEIS3P2A8K0S8 358 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 THP07101 528 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 CYP3A5P20815 502 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 CDH8P55286 799 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 DSC3Q14574 896 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 LRRC52Q8N7C0 313 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 CTNNBL1Q8WYA6 563 aaPredicted RBP18.52■□□□□ 0.56
CLDN4-201ENST00000340958 ALS2CR12Q96Q35 445 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 SMYD3Q9H7B4 428 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 CYP3A43Q9HB55 503 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 UBN1Q9NPG3 1134 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 PRDM5Q9NQX1 630 aaPredicted RBP18.52■□□□□ 0.56
CLDN4-201ENST00000340958 SNX9Q9Y5X1 595 aa18.52■□□□□ 0.56
CLDN4-201ENST00000340958 PJA2O43164 708 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 TACC1O75410 805 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 STAU1O95793 577 aaKnown RBP18.51■□□□□ 0.55
CLDN4-201ENST00000340958 ABCB4P21439 1286 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms