RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 DNTTIP2Q5QJE6 756 aaKnown RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 SPOUT1Q5T280 376 aaKnown RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 IQCEQ6IPM2 695 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 HERC6Q8IVU3 1022 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 LRRC52Q8N7C0 313 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 C3orf58Q8NDZ4 430 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 RSPH1Q8WYR4 309 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 TAF4BQ92750 862 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 KAT5Q92993 513 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 ZNF689Q96CS4 500 aaPredicted RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 UROC1Q96N76 676 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 MMS19Q96T76 1030 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 SLC9A7Q96T83 725 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 ARID3AQ99856 593 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 NUP58Q9BVL2 599 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 UBE2OQ9C0C9 1292 aaKnown RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 DNAJC12Q9UKB3 198 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 AJAP1Q9UKB5 411 aaPredicted RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 POLIQ9UNA4 740 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 CITO14578 2027 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 MICAL3Q7RTP6 2002 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 F8W810 466 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 SPTLC1O15269 473 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 TPM1P09493 284 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 PBX3P40426 434 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 TAF6P49848 677 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 FXR1P51114 621 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTSC-201ENST00000227266 LILRA4P59901 499 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 TNNC1P63316 161 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 TRIM14Q14142 442 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 KCNF1Q9H3M0 494 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 RC3H2Q9HBD1 1191 aaKnown RBP11.93□□□□□ -0.5
CTSC-201ENST00000227266 CEP72Q9P209 647 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 SNX9Q9Y5X1 595 aa11.93□□□□□ -0.5
CTSC-201ENST00000227266 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 KIF4AO95239 1232 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 P4HA1P13674 534 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 SLC11A1P49279 550 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 MFAP3P55082 362 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 TBX2Q13207 712 aaPredicted RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 CUL2Q13617 745 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 SV2CQ496J9 727 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 DCLRE1AQ6PJP8 1040 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 CMTR2Q8IYT2 770 aaKnown RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 PHOSPHO2Q8TCD6 241 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 SPAG5Q96R06 1193 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 TTYH3Q9C0H2 523 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 LUC7L2Q9Y383 392 aaKnown RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 ANK1P16157 1881 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 RALGAPA2Q2PPJ7 1873 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 NT5C1B-RDH14C9J2C7 533 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 I3L4J1 428 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 NRP1O14786 923 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 TLL1O43897 1013 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 STAU1O95793 577 aaKnown RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 ALDH2P05091 517 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 ITGB1P05556 798 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 WEE2P0C1S8 567 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 CD58P19256 250 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 RFX1P22670 979 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 ASPAP45381 313 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 GCNT1Q02742 428 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 ZNF397Q8NF99 534 aaPredicted RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 IQCDQ96DY2 449 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 KREMEN1Q96MU8 473 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 RAD9AQ99638 391 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 GDF15Q99988 308 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 NAA15Q9BXJ9 866 aaKnown RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 CWH43Q9H720 699 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 VRTNQ9H8Y1 702 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 CAPN11Q9UMQ6 739 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 INSL6Q9Y581 213 aa11.92□□□□□ -0.5
CTSC-201ENST00000227266 MRPL42Q9Y6G3 142 aaKnown RBP11.92□□□□□ -0.5
CTSC-201ENST00000227266 TNRC18O15417 2968 aaPredicted RBP11.91□□□□□ -0.5
CTSC-201ENST00000227266 A0A1W2PQJ5 194 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 AKR1B15C9JRZ8 316 aaPredicted RBP11.91□□□□□ -0.5
CTSC-201ENST00000227266 GALTP07902 379 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 PNMA6AP0CW24 399 aaPredicted RBP11.91□□□□□ -0.5
CTSC-201ENST00000227266 TBXAS1P24557 533 aaPredicted RBP11.91□□□□□ -0.5
CTSC-201ENST00000227266 KRT9P35527 623 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 USP8P40818 1118 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 BRCC3P46736 316 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 ALDH7A1P49419 539 aaKnown RBP11.91□□□□□ -0.5
CTSC-201ENST00000227266 RABGGTBP53611 331 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 CDH8P55286 799 aa11.91□□□□□ -0.5
CTSC-201ENST00000227266 BCAR1P56945 870 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms