RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TCP1P17987 556 aaKnown RBP19.39■□□□□ 0.69
VIM-201ENST00000224237 CD58P19256 250 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 GPC5P78333 572 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 TWF2Q6IBS0 349 aaKnown RBP19.39■□□□□ 0.69
VIM-201ENST00000224237 LRRC57Q8N9N7 239 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 LRRN4CLQ8ND94 238 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 ARHGEF26Q96DR7 871 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 HPDLQ96IR7 371 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 TSPAN18Q96SJ8 248 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 CXCL16Q9H2A7 254 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 AGAP1Q9UPQ3 857 aa19.39■□□□□ 0.69
VIM-201ENST00000224237 TRIP11Q15643 1979 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 UNGP13051 313 aaPredicted RBP19.38■□□□□ 0.69
VIM-201ENST00000224237 TCEAL1Q15170 157 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 MEI1Q5TIA1 1274 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 ACAD10Q6JQN1 1059 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 BEST2Q8NFU1 509 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 ZMAT2Q96NC0 199 aaKnown RBP19.38■□□□□ 0.69
VIM-201ENST00000224237 TLR10Q9BXR5 811 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 TRMT13Q9NUP7 481 aaKnown RBP19.38■□□□□ 0.69
VIM-201ENST00000224237 ST3GAL5Q9UNP4 418 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 NOD1Q9Y239 953 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 IPPQ9Y573 584 aa19.38■□□□□ 0.69
VIM-201ENST00000224237 PDCD11Q14690 1871 aaKnown RBP19.37■□□□□ 0.69
VIM-201ENST00000224237 FAM170AA1A519 330 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 THAP12O43422 761 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 CALCAP01258 141 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 CYP1A1P04798 512 aaPredicted RBP19.37■□□□□ 0.69
VIM-201ENST00000224237 WEE2P0C1S8 567 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 AKAP5P24588 427 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 THPOP40225 353 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 HADHBP55084 474 aaKnown RBP19.37■□□□□ 0.69
VIM-201ENST00000224237 PTK7Q13308 1070 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 ZBTB6Q15916 424 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 PPP1R2P3Q6NXS1 205 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 APOL6Q9BWW8 343 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 OSBPL7Q9BZF2 842 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 FAM124BQ9H5Z6 455 aaPredicted RBP19.37■□□□□ 0.69
VIM-201ENST00000224237 OSGEPQ9NPF4 335 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 CHST12Q9NRB3 414 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 POLIQ9UNA4 740 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 GPR182O15218 404 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 SRGAP2O75044 1071 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 FTCDO95954 541 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 GUCY2FP51841 1108 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 CKAP4Q07065 602 aaKnown RBP19.37■□□□□ 0.69
VIM-201ENST00000224237 MYO1EQ12965 1108 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 SLFN11Q7Z7L1 901 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 TSC1Q92574 1164 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 UBXN4Q92575 508 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 OSBPL9Q96SU4 736 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 UNC93B1Q9H1C4 597 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 CYP3A43Q9HB55 503 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 PARP2Q9UGN5 583 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 GTF3C4Q9UKN8 822 aa19.37■□□□□ 0.69
VIM-201ENST00000224237 UBQLN1Q9UMX0 589 aaKnown RBP19.37■□□□□ 0.69
VIM-201ENST00000224237 XPOTO43592 962 aaKnown RBP19.36■□□□□ 0.69
VIM-201ENST00000224237 NCK2O43639 380 aa19.36■□□□□ 0.69
VIM-201ENST00000224237 CENPCQ03188 943 aa19.36■□□□□ 0.69
VIM-201ENST00000224237 XKR4Q5GH76 650 aa19.36■□□□□ 0.69
VIM-201ENST00000224237 DAAM2Q86T65 1068 aa19.36■□□□□ 0.69
VIM-201ENST00000224237 SMG8Q8ND04 991 aaKnown RBP19.36■□□□□ 0.69
VIM-201ENST00000224237 ZNF606Q8WXB4 792 aa19.36■□□□□ 0.69
VIM-201ENST00000224237 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.36■□□□□ 0.69
VIM-201ENST00000224237 CTTNBP2NLQ9P2B4 639 aa19.36■□□□□ 0.69
VIM-201ENST00000224237 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.36■□□□□ 0.69
VIM-201ENST00000224237 PUF60Q9UHX1 559 aaKnown RBP19.36■□□□□ 0.69
VIM-201ENST00000224237 V9GYY5 206 aaPredicted RBP19.36■□□□□ 0.69
VIM-201ENST00000224237 CTAGE15A4D2H0 777 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 TFRCP02786 760 aaKnown RBP19.35■□□□□ 0.69
VIM-201ENST00000224237 CTAGE8P0CG41 777 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 NSFP46459 744 aaKnown RBP19.35■□□□□ 0.69
VIM-201ENST00000224237 TNNC1P63316 161 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 TUBB4BP68371 445 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 NFX1Q12986 1120 aaKnown RBP19.35■□□□□ 0.69
VIM-201ENST00000224237 GLRA4Q5JXX5 417 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 CTAGE6Q86UF2 777 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 CTAGE4Q8IX94 777 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 GOLGA1Q92805 767 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 ZNF653Q96CK0 615 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 TRIM11Q96F44 468 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 RNF19AQ9NV58 838 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 A0A1W2PQ45 241 aaPredicted RBP19.35■□□□□ 0.69
VIM-201ENST00000224237 A0A1W2PQY0 241 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 CAND2O75155 1236 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 CD4P01730 458 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 CYP1A2P05177 515 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 MYBL1P10243 752 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 KCNE1P15382 129 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 ZNF394Q53GI3 561 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 HACE1Q8IYU2 909 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 TTC39CQ8N584 583 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 LRRC52Q8N7C0 313 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 ARRDC4Q8NCT1 418 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 SMYD3Q9H7B4 428 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 TUBGCP4Q9UGJ1 667 aa19.35■□□□□ 0.69
VIM-201ENST00000224237 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
VIM-201ENST00000224237 MTA2O94776 668 aa19.34■□□□□ 0.69
VIM-201ENST00000224237 HSPA6P17066 643 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms