RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Pbx4Q99NE9 378 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Luc7lQ9CYI4 371 aaKnown RBP16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Slamf8Q9D3G2 278 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Tmem86aQ9D8N3 241 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Rnf138rt1Q9D9M9 248 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 DcpsQ9DAR7 338 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Cntnap5aQ0V8T9 1304 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Gm4302E9PX25 294 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Gm3127E9Q9P5 263 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Gm3453K7N724 263 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Cpsf2O35218 782 aaKnown RBP16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Vmn2r1O70410 912 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Btbd1P58544 488 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Sox8Q04886 464 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 NeblQ0II04 452 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Gm5935Q497S0 212 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Lrfn2Q80TG9 788 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Llgl1Q80Y17 1036 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Usp38Q8BW70 1042 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Ttc16Q8C1F5 767 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Sash3Q8K352 380 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Ero1aQ8R180 464 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Pcdhgb4Q91XX6 912 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Golph3Q9CRA5 298 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Gm28036V9GXJ1 658 aa16.46■□□□□ 0.23
Ddx49-201ENSMUST00000008004 Gm13941A2AJ38 245 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Acp4D3YTS9 425 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cd44P15379 778 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gjc1P28229 396 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Slc12a1P55014 1095 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Sema5aQ62217 1077 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cd300lfQ6SJQ7 337 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Olfr389Q7TRX7 312 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 CyldQ80TQ2 952 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Unc5bQ8K1S3 945 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Olfr532Q8VGT4 309 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 TraipQ8VIG6 470 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Scyl3Q9DBQ7 735 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Krt17Q9QWL7 433 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cntnap4Q99P47 1310 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lrrc4bP0C192 709 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ly6dP35459 127 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tmprss15P97435 1069 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ptcd3Q14C51 685 aaKnown RBP16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 MlxipQ2VPU4 917 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ice2Q3UZ18 988 aaKnown RBP16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Zfp251Q6PCX8 632 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Slc20a2Q80UP8 656 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cyp2d26Q8CIM7 500 aa16.45■□□□□ 0.22
Ddx49-201ENSMUST00000008004 EloblA6PWE0 161 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gm4297D3YWB7 211 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Impa1O55023 277 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 CcnoP0C242 352 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lamp2P17047 415 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tnnc1P19123 161 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 FechP22315 420 aaKnown RBP16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gjb3P28231 270 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 GssP51855 474 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 PkmP52480 531 aaKnown RBP16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Smyd1P97443 490 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Sppl2bQ3TD49 578 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ndst1Q3UHN9 882 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Nxf2Q4ZGD8 691 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Zfp658Q5PPQ4 887 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 CochQ62507 552 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cyth4Q80YW0 393 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Rassf10Q8BL43 508 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Il33Q8BVZ5 266 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gm5591Q8CDK1 855 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lrrc66Q8K0B3 872 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Spata17Q9D552 379 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Dnajb2Q9QYI5 324 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Kcnd2Q9Z0V2 630 aa16.44■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cyp2b23E9Q593 491 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cd72P21855 354 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Eef1dP57776 281 aaKnown RBP16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Pou6f1Q07916 301 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gpr15Q0VDU3 360 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Ppp4r3cQ3V0Y1 813 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 HarsQ61035 509 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 RetsatQ64FW2 609 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Maats1Q8BRC6 783 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Zfp120Q8BZW4 436 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 EpgnQ924X1 152 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Lztr1Q9CQ33 837 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 NapgQ9CWZ7 312 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 ThegQ9JMB1 375 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 1700031M16RikA0A087WSH0 82 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Gm1758F6VZZ1 202 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Krt13P08730 437 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Rhox5P52651 210 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tcp11Q01755 566 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Cracr2aQ3UP38 310 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 PrcpQ7TMR0 491 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Vat1lQ80TB8 417 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 R3hdm2Q80TM6 1044 aaKnown RBP16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Spata7Q80VP2 582 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Tmem202Q80W35 275 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Otud6bQ8K2H2 294 aa16.43■□□□□ 0.22
Ddx49-201ENSMUST00000008004 Mob2Q8VI63 235 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms