Protein–RNA interactions for Protein: A0A087WSH0

1700031M16Rik, RIKEN cDNA 1700031M16 gene, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700031M16RikA0A087WSH0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.98■■■■□ 3.99
1700031M16RikA0A087WSH0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
1700031M16RikA0A087WSH0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
1700031M16RikA0A087WSH0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
1700031M16RikA0A087WSH0 Gm15042-201ENSMUST00000120212 883 ntBASIC35.19■■■■□ 3.22
1700031M16RikA0A087WSH0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
1700031M16RikA0A087WSH0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
1700031M16RikA0A087WSH0 Gm24109-201ENSMUST00000175489 103 ntBASIC34.53■■■■□ 3.12
1700031M16RikA0A087WSH0 Gm15045-201ENSMUST00000117359 883 ntBASIC34.48■■■■□ 3.11
1700031M16RikA0A087WSH0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
1700031M16RikA0A087WSH0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
1700031M16RikA0A087WSH0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
1700031M16RikA0A087WSH0 Gm23366-201ENSMUST00000175022 89 ntBASIC33.39■■■□□ 2.94
1700031M16RikA0A087WSH0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
1700031M16RikA0A087WSH0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
1700031M16RikA0A087WSH0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.21■■■□□ 2.91
1700031M16RikA0A087WSH0 Psd-208ENSMUST00000224556 2034 ntBASIC33.19■■■□□ 2.9
1700031M16RikA0A087WSH0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
1700031M16RikA0A087WSH0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
1700031M16RikA0A087WSH0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
1700031M16RikA0A087WSH0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
1700031M16RikA0A087WSH0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
1700031M16RikA0A087WSH0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
1700031M16RikA0A087WSH0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
1700031M16RikA0A087WSH0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
1700031M16RikA0A087WSH0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
1700031M16RikA0A087WSH0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
1700031M16RikA0A087WSH0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.4■■■□□ 2.78
1700031M16RikA0A087WSH0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.32■■■□□ 2.76
1700031M16RikA0A087WSH0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
1700031M16RikA0A087WSH0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
1700031M16RikA0A087WSH0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.99■■■□□ 2.71
1700031M16RikA0A087WSH0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.91■■■□□ 2.7
1700031M16RikA0A087WSH0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
1700031M16RikA0A087WSH0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
1700031M16RikA0A087WSH0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.68■■■□□ 2.66
1700031M16RikA0A087WSH0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
1700031M16RikA0A087WSH0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
1700031M16RikA0A087WSH0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
1700031M16RikA0A087WSH0 Gm25238-201ENSMUST00000174914 89 ntBASIC31.48■■■□□ 2.63
1700031M16RikA0A087WSH0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
1700031M16RikA0A087WSH0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
1700031M16RikA0A087WSH0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.35■■■□□ 2.61
1700031M16RikA0A087WSH0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
1700031M16RikA0A087WSH0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.3■■■□□ 2.6
1700031M16RikA0A087WSH0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
1700031M16RikA0A087WSH0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
1700031M16RikA0A087WSH0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
1700031M16RikA0A087WSH0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.14■■■□□ 2.58
1700031M16RikA0A087WSH0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
1700031M16RikA0A087WSH0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
1700031M16RikA0A087WSH0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
1700031M16RikA0A087WSH0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
1700031M16RikA0A087WSH0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
1700031M16RikA0A087WSH0 Gm27325-201ENSMUST00000175467 74 ntBASIC30.87■■■□□ 2.53
1700031M16RikA0A087WSH0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.86■■■□□ 2.53
1700031M16RikA0A087WSH0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
1700031M16RikA0A087WSH0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
1700031M16RikA0A087WSH0 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.74■■■□□ 2.51
1700031M16RikA0A087WSH0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
1700031M16RikA0A087WSH0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.64■■■□□ 2.5
1700031M16RikA0A087WSH0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
1700031M16RikA0A087WSH0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.56■■■□□ 2.48
1700031M16RikA0A087WSH0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
1700031M16RikA0A087WSH0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
1700031M16RikA0A087WSH0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
1700031M16RikA0A087WSH0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.46■■■□□ 2.47
1700031M16RikA0A087WSH0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.44■■■□□ 2.46
1700031M16RikA0A087WSH0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
1700031M16RikA0A087WSH0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
1700031M16RikA0A087WSH0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
1700031M16RikA0A087WSH0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
1700031M16RikA0A087WSH0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
1700031M16RikA0A087WSH0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.32■■■□□ 2.44
1700031M16RikA0A087WSH0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
1700031M16RikA0A087WSH0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
1700031M16RikA0A087WSH0 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.26■■■□□ 2.43
1700031M16RikA0A087WSH0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
1700031M16RikA0A087WSH0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
1700031M16RikA0A087WSH0 Rab21-202ENSMUST00000218831 843 ntBASIC30.12■■■□□ 2.41
1700031M16RikA0A087WSH0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.1■■■□□ 2.41
1700031M16RikA0A087WSH0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
1700031M16RikA0A087WSH0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
1700031M16RikA0A087WSH0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30■■■□□ 2.39
1700031M16RikA0A087WSH0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.99■■■□□ 2.39
1700031M16RikA0A087WSH0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.96■■■□□ 2.39
1700031M16RikA0A087WSH0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
1700031M16RikA0A087WSH0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
1700031M16RikA0A087WSH0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
1700031M16RikA0A087WSH0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
1700031M16RikA0A087WSH0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.79■■■□□ 2.36
1700031M16RikA0A087WSH0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.78■■■□□ 2.36
1700031M16RikA0A087WSH0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
1700031M16RikA0A087WSH0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
1700031M16RikA0A087WSH0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
1700031M16RikA0A087WSH0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
1700031M16RikA0A087WSH0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
1700031M16RikA0A087WSH0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
1700031M16RikA0A087WSH0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
1700031M16RikA0A087WSH0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms