RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W GAP1P19145 602 aaPredicted RBP13.62□□□□□ -0.23
PRE6YOL038W MAM1P40065 302 aa13.62□□□□□ -0.23
PRE6YOL038W IOC4Q04213 475 aa13.62□□□□□ -0.23
PRE6YOL038W HAT1Q12341 374 aa13.62□□□□□ -0.23
PRE6YOL038W RPN1P38764 993 aaKnown RBP13.61□□□□□ -0.23
PRE6YOL038W HEF3P53978 1044 aaKnown RBP13.61□□□□□ -0.23
PRE6YOL038W FCP1Q03254 732 aa13.61□□□□□ -0.23
PRE6YOL038W SYF1Q04048 859 aaPredicted RBP13.6□□□□□ -0.23
PRE6YOL038W GRX6Q12438 231 aa13.6□□□□□ -0.23
PRE6YOL038W SET4P42948 560 aa13.59□□□□□ -0.23
PRE6YOL038W YOL057WQ08225 711 aa13.59□□□□□ -0.23
PRE6YOL038W SWI1P09547 1314 aa13.59□□□□□ -0.23
PRE6YOL038W YLR271WQ06152 274 aa13.58□□□□□ -0.24
PRE6YOL038W GYP7P48365 746 aa13.57□□□□□ -0.24
PRE6YOL038W RTG2P32608 588 aaKnown RBP13.56□□□□□ -0.24
PRE6YOL038W SAS4Q04003 481 aa13.56□□□□□ -0.24
PRE6YOL038W DPL1Q05567 589 aa13.55□□□□□ -0.24
PRE6YOL038W YDR306CQ06640 478 aa13.54□□□□□ -0.24
PRE6YOL038W DUR1,2P32528 1835 aaKnown RBP13.53□□□□□ -0.24
PRE6YOL038W TPD3P31383 635 aa13.53□□□□□ -0.24
PRE6YOL038W SRT1Q03175 343 aa13.53□□□□□ -0.24
PRE6YOL038W YDL144CQ07589 356 aa13.53□□□□□ -0.24
PRE6YOL038W RPS9BP05755 195 aaKnown RBP13.52□□□□□ -0.25
PRE6YOL038W FET4P40988 552 aa13.52□□□□□ -0.25
PRE6YOL038W PKH1Q03407 766 aa13.51□□□□□ -0.25
PRE6YOL038W GAS5Q08193 484 aa13.51□□□□□ -0.25
PRE6YOL038W VHR2P40041 505 aa13.49□□□□□ -0.25
PRE6YOL038W YJR008WP47085 338 aa13.49□□□□□ -0.25
PRE6YOL038W YGR122WP53272 402 aa13.48□□□□□ -0.25
PRE6YOL038W DNM1P54861 757 aa13.48□□□□□ -0.25
PRE6YOL038W TRP5P00931 707 aaKnown RBP13.47□□□□□ -0.25
PRE6YOL038W STV1P37296 890 aa13.47□□□□□ -0.25
PRE6YOL038W CST6P40535 587 aa13.47□□□□□ -0.25
PRE6YOL038W MSM1P22438 575 aa13.46□□□□□ -0.25
PRE6YOL038W NUP133P36161 1157 aa13.46□□□□□ -0.25
PRE6YOL038W ETP1P38748 585 aaKnown RBP13.46□□□□□ -0.25
PRE6YOL038W SPL2P38839 148 aa13.46□□□□□ -0.25
PRE6YOL038W NSR1P27476 414 aaKnown RBP RIP-Chip data13.45□□□□□ -0.26not detected
PRE6YOL038W KRE2P27809 442 aa13.45□□□□□ -0.26
PRE6YOL038W GLC3P32775 704 aa13.45□□□□□ -0.26
PRE6YOL038W ICP55P40051 511 aa13.45□□□□□ -0.26
PRE6YOL038W VPS4P52917 437 aa13.45□□□□□ -0.26
PRE6YOL038W FLO11P08640 1367 aa13.45□□□□□ -0.26
PRE6YOL038W MRP7P12687 371 aa13.44□□□□□ -0.26
PRE6YOL038W TRM44Q02648 567 aaKnown RBP13.44□□□□□ -0.26
PRE6YOL038W TIM50Q02776 476 aa13.44□□□□□ -0.26
PRE6YOL038W RPT4P53549 437 aaKnown RBP13.43□□□□□ -0.26
PRE6YOL038W SET1P38827 1080 aaKnown RBP13.42□□□□□ -0.26
PRE6YOL038W YIL089WP40500 205 aa13.42□□□□□ -0.26
PRE6YOL038W HXT10P43581 546 aa13.42□□□□□ -0.26
PRE6YOL038W ITC1P53125 1264 aa13.42□□□□□ -0.26
PRE6YOL038W DPH6Q12429 685 aa13.42□□□□□ -0.26
PRE6YOL038W SUI2P20459 304 aaKnown RBP13.41□□□□□ -0.26
PRE6YOL038W DUS1P53759 423 aaKnown RBP13.41□□□□□ -0.26
PRE6YOL038W GSC2P40989 1895 aa13.4□□□□□ -0.26
PRE6YOL038W SWC3P31376 625 aa13.4□□□□□ -0.26
PRE6YOL038W AFG2P32794 780 aa13.4□□□□□ -0.26
PRE6YOL038W YGR117CP53270 476 aa13.4□□□□□ -0.26
PRE6YOL038W AIM7Q12156 149 aa13.4□□□□□ -0.26
PRE6YOL038W EMP47P43555 445 aa13.39□□□□□ -0.27
PRE6YOL038W SAC3P46674 1301 aa13.39□□□□□ -0.27
PRE6YOL038W MGM1P32266 881 aa13.38□□□□□ -0.27
PRE6YOL038W TOS4Q06266 489 aa13.38□□□□□ -0.27
PRE6YOL038W THI3Q07471 609 aa13.38□□□□□ -0.27
PRE6YOL038W RAD24P32641 659 aa13.37□□□□□ -0.27
PRE6YOL038W NGR1P32831 672 aaKnown RBP13.37□□□□□ -0.27
PRE6YOL038W PSH1Q12161 406 aa13.37□□□□□ -0.27
PRE6YOL038W POM152P39685 1337 aa13.37□□□□□ -0.27
PRE6YOL038W HPR1P17629 752 aaKnown RBP13.36□□□□□ -0.27
PRE6YOL038W GSM1P42950 618 aa13.36□□□□□ -0.27
PRE6YOL038W RRG1Q12167 365 aaPredicted RBP13.36□□□□□ -0.27
PRE6YOL038W PEA2P40091 420 aa13.35□□□□□ -0.27
PRE6YOL038W LCB1P25045 558 aaKnown RBP13.32□□□□□ -0.28
PRE6YOL038W TIF4632P39936 914 aaKnown RBP13.32□□□□□ -0.28
PRE6YOL038W IRC4Q03036 179 aa13.31□□□□□ -0.28
PRE6YOL038W UBP12P39538 1254 aa13.3□□□□□ -0.28
PRE6YOL038W UBX2Q04228 584 aa13.3□□□□□ -0.28
PRE6YOL038W PNT1P38969 423 aa13.29□□□□□ -0.28
PRE6YOL038W UTP7P40055 554 aaKnown RBP13.29□□□□□ -0.28
PRE6YOL038W CWC15Q03772 175 aaKnown RBP13.29□□□□□ -0.28
PRE6YOL038W MTC5Q03897 1148 aa13.29□□□□□ -0.28
PRE6YOL038W PRP42Q03776 544 aaKnown RBP13.27□□□□□ -0.29
PRE6YOL038W CRF1Q04930 467 aa13.27□□□□□ -0.29
PRE6YOL038W CBP1P07252 654 aa13.26□□□□□ -0.29
PRE6YOL038W RPS7AP26786 190 aaKnown RBP13.26□□□□□ -0.29
PRE6YOL038W BOI2P39969 1040 aa13.26□□□□□ -0.29
PRE6YOL038W MTC3P53077 123 aa13.26□□□□□ -0.29
PRE6YOL038W CSI1Q04368 295 aa13.26□□□□□ -0.29
PRE6YOL038W TYW1Q08960 810 aaKnown RBP13.26□□□□□ -0.29
PRE6YOL038W ARG82P07250 355 aa13.25□□□□□ -0.29
PRE6YOL038W YPP1P46951 817 aa13.25□□□□□ -0.29
PRE6YOL038W ADR1P07248 1323 aa13.23□□□□□ -0.29
PRE6YOL038W SLA1P32790 1244 aa13.23□□□□□ -0.29
PRE6YOL038W SRC1Q03707 834 aa13.23□□□□□ -0.29
PRE6YOL038W RPP0P05317 312 aaKnown RBP13.22□□□□□ -0.29
PRE6YOL038W HVG1P0CE11 249 aa13.22□□□□□ -0.29
PRE6YOL038W RPT3P33298 428 aaKnown RBP13.21□□□□□ -0.29
PRE6YOL038W VPS27P40343 622 aaKnown RBP13.21□□□□□ -0.29
PRE6YOL038W SEN54Q02825 467 aaPredicted RBP13.21□□□□□ -0.29
PRE6YOL038W NOP8Q08287 484 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms