RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W YDR215CQ12240 137 aa6.19□□□□□ -1.42
SWM2YNR004W MRX12P47084 519 aa6.18□□□□□ -1.42
SWM2YNR004W EMP47P43555 445 aa6.17□□□□□ -1.42
SWM2YNR004W JJJ2P46997 583 aa6.17□□□□□ -1.42
SWM2YNR004W ISF1P32488 338 aa6.16□□□□□ -1.42
SWM2YNR004W MET1P36150 593 aa6.16□□□□□ -1.42
SWM2YNR004W AMN1P38285 549 aaPredicted RBP6.16□□□□□ -1.42
SWM2YNR004W SLN1P39928 1220 aaPredicted RBP6.16□□□□□ -1.42
SWM2YNR004W SUM1P46676 1062 aa6.15□□□□□ -1.42
SWM2YNR004W APL6P46682 809 aa6.15□□□□□ -1.42
SWM2YNR004W MCA1Q08601 432 aa6.15□□□□□ -1.42
SWM2YNR004W IRE1P32361 1115 aa6.14□□□□□ -1.43
SWM2YNR004W MCM16Q12262 181 aa6.14□□□□□ -1.43
SWM2YNR004W TAT1P38085 619 aa6.13□□□□□ -1.43
SWM2YNR004W MAC1P35192 417 aa6.12□□□□□ -1.43
SWM2YNR004W MRPL16P38064 232 aa6.12□□□□□ -1.43
SWM2YNR004W HAL5P38970 855 aaKnown RBP6.12□□□□□ -1.43
SWM2YNR004W LSB6P42951 607 aa6.12□□□□□ -1.43
SWM2YNR004W STB3Q12427 513 aa6.12□□□□□ -1.43
SWM2YNR004W PDC5P16467 563 aaKnown RBP6.11□□□□□ -1.43
SWM2YNR004W KNS1P32350 737 aaPredicted RBP6.11□□□□□ -1.43
SWM2YNR004W SHM1P37292 490 aaPredicted RBP6.11□□□□□ -1.43
SWM2YNR004W SPT5P27692 1063 aaKnown RBP6.09□□□□□ -1.43
SWM2YNR004W CSE4P36012 229 aa6.09□□□□□ -1.43
SWM2YNR004W PSH1Q12161 406 aa6.09□□□□□ -1.43
SWM2YNR004W PDC6P26263 563 aaKnown RBP6.08□□□□□ -1.44
SWM2YNR004W SLX8P40072 274 aa6.08□□□□□ -1.44
SWM2YNR004W KIN1P13185 1064 aa6.06□□□□□ -1.44
SWM2YNR004W PRY1P47032 299 aa6.06□□□□□ -1.44
SWM2YNR004W SOH1P38633 127 aa6.05□□□□□ -1.44
SWM2YNR004W ATG3P40344 310 aa6.05□□□□□ -1.44
SWM2YNR004W SPR3P41901 512 aa6.05□□□□□ -1.44
SWM2YNR004W TY1A-DR2Q03964 440 aaKnown RBP6.05□□□□□ -1.44
SWM2YNR004W HDA3Q06623 655 aa6.05□□□□□ -1.44
SWM2YNR004W YDJ1P25491 409 aaKnown RBP6.03□□□□□ -1.44
SWM2YNR004W YBL036CP38197 257 aa6.03□□□□□ -1.44
SWM2YNR004W UTP13Q05946 817 aaKnown RBP6.02□□□□□ -1.45
SWM2YNR004W YPL034WQ03083 165 aa6.01□□□□□ -1.45
SWM2YNR004W RPP1AP05318 106 aaPredicted RBP6□□□□□ -1.45
SWM2YNR004W ALO1P54783 526 aaKnown RBP6□□□□□ -1.45
SWM2YNR004W GLT1Q12680 2145 aaKnown RBP6□□□□□ -1.45
SWM2YNR004W HPC2Q01448 625 aa5.99□□□□□ -1.45
SWM2YNR004W TFB3Q03290 321 aa5.99□□□□□ -1.45
SWM2YNR004W RPS31P05759 152 aaKnown RBP5.98□□□□□ -1.45
SWM2YNR004W YPP1P46951 817 aa5.98□□□□□ -1.45
SWM2YNR004W LEU1P07264 779 aaKnown RBP5.97□□□□□ -1.45
SWM2YNR004W OMA1P36163 345 aa5.97□□□□□ -1.45
SWM2YNR004W TPS3P38426 1054 aaKnown RBP5.97□□□□□ -1.45
SWM2YNR004W MSC7P38694 644 aa5.97□□□□□ -1.45
SWM2YNR004W YPQ2Q06328 317 aa5.97□□□□□ -1.45
SWM2YNR004W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
SWM2YNR004W SWI5P08153 709 aa5.96□□□□□ -1.46
SWM2YNR004W GUA1P38625 525 aaKnown RBP5.96□□□□□ -1.46
SWM2YNR004W YTA6P40328 754 aa5.95□□□□□ -1.46
SWM2YNR004W IRC24P40580 263 aa5.95□□□□□ -1.46
SWM2YNR004W ALD2P47771 506 aa5.95□□□□□ -1.46
SWM2YNR004W NHA1Q99271 985 aa5.95□□□□□ -1.46
SWM2YNR004W RGP1P16664 663 aa5.93□□□□□ -1.46
SWM2YNR004W ALG14P38242 237 aa5.93□□□□□ -1.46
SWM2YNR004W AIM9P40053 627 aaKnown RBP5.93□□□□□ -1.46
SWM2YNR004W PGM2P37012 569 aaKnown RBP5.92□□□□□ -1.46
SWM2YNR004W BRL1P38770 471 aa5.92□□□□□ -1.46
SWM2YNR004W INP52P50942 1183 aa5.92□□□□□ -1.46
SWM2YNR004W BUD9P53226 547 aa5.91□□□□□ -1.46
SWM2YNR004W YNL165WP53891 406 aa5.91□□□□□ -1.46
SWM2YNR004W BIO2P32451 375 aa5.9□□□□□ -1.46
SWM2YNR004W MCM1P11746 286 aa5.89□□□□□ -1.47
SWM2YNR004W RPS6AP0CX37 236 aaKnown RBP5.88□□□□□ -1.47
SWM2YNR004W RPS6BP0CX38 236 aaPredicted RBP5.88□□□□□ -1.47
SWM2YNR004W MLF3P32047 452 aa5.88□□□□□ -1.47
SWM2YNR004W HEH2Q03281 663 aa5.87□□□□□ -1.47
SWM2YNR004W ENO2P00925 437 aaKnown RBP5.86□□□□□ -1.47
SWM2YNR004W NAB2P32505 525 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SWM2YNR004W YFL034WP43564 1073 aa5.86□□□□□ -1.47
SWM2YNR004W YNL108CP53929 270 aa5.86□□□□□ -1.47
SWM2YNR004W AI3P03877 415 aa5.85□□□□□ -1.47
SWM2YNR004W PRK1P40494 810 aa5.85□□□□□ -1.47
SWM2YNR004W SUP45P12385 437 aaKnown RBP5.84□□□□□ -1.47
SWM2YNR004W NAR1P23503 491 aaKnown RBP5.84□□□□□ -1.47
SWM2YNR004W GIS4Q04233 774 aa5.84□□□□□ -1.47
SWM2YNR004W Q0182Q9ZZW1 134 aa5.84□□□□□ -1.47
SWM2YNR004W PKC1P24583 1151 aa5.83□□□□□ -1.48
SWM2YNR004W NTH2P35172 780 aa5.83□□□□□ -1.48
SWM2YNR004W AVT1P47082 602 aa5.83□□□□□ -1.48
SWM2YNR004W RIM21P48565 533 aa5.83□□□□□ -1.48
SWM2YNR004W PGM1P33401 570 aaKnown RBP5.82□□□□□ -1.48
SWM2YNR004W NCL1P38205 684 aaKnown RBP5.82□□□□□ -1.48
SWM2YNR004W MTO1P53070 669 aa5.82□□□□□ -1.48
SWM2YNR004W GAS5Q08193 484 aa5.82□□□□□ -1.48
SWM2YNR004W SAC7P17121 654 aa5.81□□□□□ -1.48
SWM2YNR004W RDS2P19541 446 aaKnown RBP5.81□□□□□ -1.48
SWM2YNR004W RRM3P38766 723 aa5.81□□□□□ -1.48
SWM2YNR004W COQ2P32378 372 aa5.79□□□□□ -1.48
SWM2YNR004W ARI1P53111 347 aaKnown RBP5.79□□□□□ -1.48
SWM2YNR004W PDI1P17967 522 aaKnown RBP5.78□□□□□ -1.48
SWM2YNR004W CYT1P07143 309 aa5.77□□□□□ -1.49
SWM2YNR004W YKR073CP36153 106 aa5.77□□□□□ -1.49
SWM2YNR004W MED7Q08278 222 aa5.77□□□□□ -1.49
SWM2YNR004W RQC2Q12532 1038 aaKnown RBP5.77□□□□□ -1.49
SWM2YNR004W SFA1P32771 386 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms