RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W ISF1P32488 338 aa2.28□□□□□ -2.04
SEC21YNL287W UTR2P32623 467 aa2.28□□□□□ -2.04
SEC21YNL287W JJJ2P46997 583 aa2.28□□□□□ -2.04
SEC21YNL287W RPS31P05759 152 aaKnown RBP2.27□□□□□ -2.05
SEC21YNL287W ADE12P80210 433 aaKnown RBP2.27□□□□□ -2.05
SEC21YNL287W RDS2P19541 446 aaKnown RBP2.27□□□□□ -2.05
SEC21YNL287W GPM1P00950 247 aaKnown RBP2.27□□□□□ -2.05
SEC21YNL287W MCX1P38323 520 aaPredicted RBP2.27□□□□□ -2.05
SEC21YNL287W RIM21P48565 533 aa2.27□□□□□ -2.05
SEC21YNL287W KRE33P53914 1056 aaKnown RBP2.27□□□□□ -2.05
SEC21YNL287W YMR265CQ03508 461 aaKnown RBP2.27□□□□□ -2.05
SEC21YNL287W THI72Q08579 599 aa2.27□□□□□ -2.05
SEC21YNL287W PSH1Q12161 406 aa2.27□□□□□ -2.05
SEC21YNL287W YPR053CQ6Q5F3 151 aa2.27□□□□□ -2.05
SEC21YNL287W IRE1P32361 1115 aa2.26□□□□□ -2.05
SEC21YNL287W SBE2P42223 864 aaKnown RBP2.26□□□□□ -2.05
SEC21YNL287W YPP1P46951 817 aa2.26□□□□□ -2.05
SEC21YNL287W TFB3Q03290 321 aa2.26□□□□□ -2.05
SEC21YNL287W HDA3Q06623 655 aa2.26□□□□□ -2.05
SEC21YNL287W PKC1P24583 1151 aa2.26□□□□□ -2.05
SEC21YNL287W PDC6P26263 563 aaKnown RBP2.26□□□□□ -2.05
SEC21YNL287W YBL036CP38197 257 aa2.26□□□□□ -2.05
SEC21YNL287W TDA6Q06466 467 aa2.26□□□□□ -2.05
SEC21YNL287W LEU1P07264 779 aaKnown RBP2.25□□□□□ -2.05
SEC21YNL287W MCM1P11746 286 aa2.25□□□□□ -2.05
SEC21YNL287W AHP1P38013 176 aaKnown RBP2.25□□□□□ -2.05
SEC21YNL287W SPR3P41901 512 aa2.25□□□□□ -2.05
SEC21YNL287W ENO2P00925 437 aaKnown RBP2.25□□□□□ -2.05
SEC21YNL287W YCK2P23292 546 aaKnown RBP2.25□□□□□ -2.05
SEC21YNL287W TBS1P38114 1094 aa2.25□□□□□ -2.05
SEC21YNL287W SOH1P38633 127 aa2.25□□□□□ -2.05
SEC21YNL287W MSC7P38694 644 aa2.25□□□□□ -2.05
SEC21YNL287W UTP7P40055 554 aaKnown RBP2.25□□□□□ -2.05
SEC21YNL287W ATG3P40344 310 aa2.25□□□□□ -2.05
SEC21YNL287W ALD2P47771 506 aa2.25□□□□□ -2.05
SEC21YNL287W KNS1P32350 737 aaPredicted RBP2.24□□□□□ -2.05
SEC21YNL287W MRX10Q05648 414 aa2.24□□□□□ -2.05
SEC21YNL287W SWI5P08153 709 aa2.24□□□□□ -2.05
SEC21YNL287W DAT1P13483 248 aaKnown RBP2.24□□□□□ -2.05
SEC21YNL287W BRL1P38770 471 aa2.24□□□□□ -2.05
SEC21YNL287W YDR215CQ12240 137 aa2.24□□□□□ -2.05
SEC21YNL287W PDC5P16467 563 aaKnown RBP2.23□□□□□ -2.05
SEC21YNL287W TY1A-DR2Q03964 440 aaKnown RBP2.23□□□□□ -2.05
SEC21YNL287W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SEC21YNL287W PEP12P32854 288 aa2.23□□□□□ -2.05
SEC21YNL287W MRPL16P38064 232 aa2.23□□□□□ -2.05
SEC21YNL287W YNL165WP53891 406 aa2.23□□□□□ -2.05
SEC21YNL287W YMR187CQ03236 431 aa2.23□□□□□ -2.05
SEC21YNL287W FPS1P23900 669 aa2.22□□□□□ -2.05
SEC21YNL287W AIM9P40053 627 aaKnown RBP2.22□□□□□ -2.05
SEC21YNL287W NRD1P53617 575 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SEC21YNL287W SKP1P52286 194 aa2.21□□□□□ -2.06
SEC21YNL287W YNL108CP53929 270 aa2.21□□□□□ -2.06
SEC21YNL287W RPS6AP0CX37 236 aaKnown RBP2.21□□□□□ -2.06
SEC21YNL287W RPS6BP0CX38 236 aaPredicted RBP2.21□□□□□ -2.06
SEC21YNL287W RGP1P16664 663 aa2.21□□□□□ -2.06
SEC21YNL287W UBP1P25037 809 aa2.21□□□□□ -2.06
SEC21YNL287W AMN1P38285 549 aaPredicted RBP2.21□□□□□ -2.06
SEC21YNL287W ALA1P40825 983 aaKnown RBP2.21□□□□□ -2.06
SEC21YNL287W STB3Q12427 513 aa2.21□□□□□ -2.06
SEC21YNL287W SLN1P39928 1220 aaPredicted RBP2.2□□□□□ -2.06
SEC21YNL287W UTP4Q06679 776 aaKnown RBP2.2□□□□□ -2.06
SEC21YNL287W BOI2P39969 1040 aa2.2□□□□□ -2.06
SEC21YNL287W YFL034WP43564 1073 aa2.2□□□□□ -2.06
SEC21YNL287W RPP1AP05318 106 aaPredicted RBP2.19□□□□□ -2.06
SEC21YNL287W MET1P36150 593 aa2.19□□□□□ -2.06
SEC21YNL287W YNR014WP53719 212 aa2.19□□□□□ -2.06
SEC21YNL287W TSC13Q99190 310 aa2.19□□□□□ -2.06
SEC21YNL287W ENO1P00924 437 aaKnown RBP2.19□□□□□ -2.06
SEC21YNL287W MLF3P32047 452 aa2.19□□□□□ -2.06
SEC21YNL287W PGM1P33401 570 aaKnown RBP2.18□□□□□ -2.06
SEC21YNL287W HXT5P38695 592 aa2.18□□□□□ -2.06
SEC21YNL287W RPC31P17890 251 aa2.18□□□□□ -2.06
SEC21YNL287W NTH2P35172 780 aa2.18□□□□□ -2.06
SEC21YNL287W HEH2Q03281 663 aa2.18□□□□□ -2.06
SEC21YNL287W MCA1Q08601 432 aa2.18□□□□□ -2.06
SEC21YNL287W TIF1P10081 395 aaKnown RBP2.18□□□□□ -2.06
SEC21YNL287W ATG32P40458 529 aa2.18□□□□□ -2.06
SEC21YNL287W PRK1P40494 810 aa2.18□□□□□ -2.06
SEC21YNL287W GLT1Q12680 2145 aaKnown RBP2.17□□□□□ -2.06
SEC21YNL287W TPS3P38426 1054 aaKnown RBP2.17□□□□□ -2.06
SEC21YNL287W LSB6P42951 607 aa2.17□□□□□ -2.06
SEC21YNL287W CYT1P07143 309 aa2.17□□□□□ -2.06
SEC21YNL287W NGR1P32831 672 aaKnown RBP2.17□□□□□ -2.06
SEC21YNL287W BIM1P40013 344 aa2.17□□□□□ -2.06
SEC21YNL287W YJL007CP47080 104 aa2.17□□□□□ -2.06
SEC21YNL287W BUD9P53226 547 aa2.17□□□□□ -2.06
SEC21YNL287W GIS4Q04233 774 aa2.17□□□□□ -2.06
SEC21YNL287W PDI1P17967 522 aaKnown RBP2.16□□□□□ -2.06
SEC21YNL287W NAR1P23503 491 aaKnown RBP2.16□□□□□ -2.06
SEC21YNL287W PHO87P25360 923 aa2.16□□□□□ -2.06
SEC21YNL287W ACS2P52910 683 aaKnown RBP2.16□□□□□ -2.06
SEC21YNL287W YPL034WQ03083 165 aa2.16□□□□□ -2.06
SEC21YNL287W Q0182Q9ZZW1 134 aa2.16□□□□□ -2.06
SEC21YNL287W AI3P03877 415 aa2.16□□□□□ -2.06
SEC21YNL287W SCD5P34758 872 aa2.16□□□□□ -2.06
SEC21YNL287W PRY1P47032 299 aa2.16□□□□□ -2.06
SEC21YNL287W PGM2P37012 569 aaKnown RBP2.15□□□□□ -2.06
SEC21YNL287W YTA6P40328 754 aa2.15□□□□□ -2.06
SEC21YNL287W INP52P50942 1183 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms