RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W TGL4P36165 910 aa8.05□□□□□ -1.12
SSU72YNL222W TSC13Q99190 310 aa8.05□□□□□ -1.12
SSU72YNL222W RPS6AP0CX37 236 aaKnown RBP8.04□□□□□ -1.12
SSU72YNL222W RPS6BP0CX38 236 aaPredicted RBP8.04□□□□□ -1.12
SSU72YNL222W PHO87P25360 923 aa8.04□□□□□ -1.12
SSU72YNL222W NTH2P35172 780 aa8.04□□□□□ -1.12
SSU72YNL222W SSN3P39073 555 aa8.04□□□□□ -1.12
SSU72YNL222W SUM1P46676 1062 aa8.04□□□□□ -1.12
SSU72YNL222W ACS2P52910 683 aaKnown RBP8.04□□□□□ -1.12
SSU72YNL222W GAL2P13181 574 aa8.02□□□□□ -1.13
SSU72YNL222W OSH7P38755 437 aa8.02□□□□□ -1.13
SSU72YNL222W VTC4P47075 721 aa8.02□□□□□ -1.13
SSU72YNL222W ECM23Q02710 187 aa8.02□□□□□ -1.13
SSU72YNL222W DAL1P32375 460 aa8.01□□□□□ -1.13
SSU72YNL222W ALA1P40825 983 aaKnown RBP8.01□□□□□ -1.13
SSU72YNL222W HAP4P14064 554 aa8□□□□□ -1.13
SSU72YNL222W MSN5P52918 1224 aa8□□□□□ -1.13
SSU72YNL222W CDC19P00549 500 aaKnown RBP7.99□□□□□ -1.13
SSU72YNL222W PUP1P25043 261 aa7.99□□□□□ -1.13
SSU72YNL222W YPQ2Q06328 317 aa7.99□□□□□ -1.13
SSU72YNL222W TY1A-DR3Q12441 440 aa7.99□□□□□ -1.13
SSU72YNL222W CYT1P07143 309 aa7.98□□□□□ -1.13
SSU72YNL222W SLA1P32790 1244 aa7.98□□□□□ -1.13
SSU72YNL222W AHP1P38013 176 aaKnown RBP7.98□□□□□ -1.13
SSU72YNL222W ROG3P43602 733 aa7.98□□□□□ -1.13
SSU72YNL222W YGR035CP53222 116 aa7.98□□□□□ -1.13
SSU72YNL222W SSA4P22202 642 aaKnown RBP7.97□□□□□ -1.13
SSU72YNL222W ROM1P53046 1155 aa7.97□□□□□ -1.13
SSU72YNL222W GAS4Q08271 471 aa7.97□□□□□ -1.13
SSU72YNL222W JJJ2P46997 583 aa7.96□□□□□ -1.14
SSU72YNL222W NAM8Q00539 523 aaKnown RBP7.96□□□□□ -1.14
SSU72YNL222W TY1A-MR1Q04215 440 aa7.96□□□□□ -1.14
SSU72YNL222W SHM1P37292 490 aaPredicted RBP7.95□□□□□ -1.14
SSU72YNL222W UBX7P38349 436 aa7.95□□□□□ -1.14
SSU72YNL222W HPF1Q05164 967 aa7.95□□□□□ -1.14
SSU72YNL222W YML083CQ04526 418 aa7.94□□□□□ -1.14
SSU72YNL222W UBP15P50101 1230 aa7.93□□□□□ -1.14
SSU72YNL222W NOB1Q08444 459 aaKnown RBP7.93□□□□□ -1.14
SSU72YNL222W CCP1P00431 361 aa7.92□□□□□ -1.14
SSU72YNL222W TRK2P28584 889 aa7.92□□□□□ -1.14
SSU72YNL222W MCM1P11746 286 aa7.91□□□□□ -1.14
SSU72YNL222W UBP1P25037 809 aa7.91□□□□□ -1.14
SSU72YNL222W IRE1P32361 1115 aa7.91□□□□□ -1.14
SSU72YNL222W YNL165WP53891 406 aa7.9□□□□□ -1.14
SSU72YNL222W SUB2Q07478 446 aaKnown RBP7.89□□□□□ -1.15
SSU72YNL222W VAN1P23642 535 aa7.88□□□□□ -1.15
SSU72YNL222W RPS31P05759 152 aaKnown RBP7.87□□□□□ -1.15
SSU72YNL222W PDC6P26263 563 aaKnown RBP7.87□□□□□ -1.15
SSU72YNL222W CUZ1P53899 274 aa7.87□□□□□ -1.15
SSU72YNL222W PSH1Q12161 406 aa7.87□□□□□ -1.15
SSU72YNL222W NGR1P32831 672 aaKnown RBP7.86□□□□□ -1.15
SSU72YNL222W DPH6Q12429 685 aa7.86□□□□□ -1.15
SSU72YNL222W TRS33Q99394 268 aa7.86□□□□□ -1.15
SSU72YNL222W MLF3P32047 452 aa7.85□□□□□ -1.15
SSU72YNL222W LYS5P50113 272 aa7.85□□□□□ -1.15
SSU72YNL222W Q0182Q9ZZW1 134 aa7.85□□□□□ -1.15
SSU72YNL222W SUV3P32580 737 aa7.83□□□□□ -1.16
SSU72YNL222W HXT5P38695 592 aa7.82□□□□□ -1.16
SSU72YNL222W YTA6P40328 754 aa7.82□□□□□ -1.16
SSU72YNL222W CWH41P53008 833 aa7.82□□□□□ -1.16
SSU72YNL222W YMR265CQ03508 461 aaKnown RBP7.82□□□□□ -1.16
SSU72YNL222W DIT1P21623 536 aa7.81□□□□□ -1.16
SSU72YNL222W ALD2P47771 506 aa7.8□□□□□ -1.16
SSU72YNL222W FOX2Q02207 900 aaKnown RBP7.8□□□□□ -1.16
SSU72YNL222W STB3Q12427 513 aa7.8□□□□□ -1.16
SSU72YNL222W LEU1P07264 779 aaKnown RBP7.79□□□□□ -1.16
SSU72YNL222W SCD5P34758 872 aa7.79□□□□□ -1.16
SSU72YNL222W MRPL16P38064 232 aa7.79□□□□□ -1.16
SSU72YNL222W CEM1P39525 442 aa7.79□□□□□ -1.16
SSU72YNL222W PUF6Q04373 656 aaKnown RBP7.79□□□□□ -1.16
SSU72YNL222W CAB1Q04430 367 aa7.79□□□□□ -1.16
SSU72YNL222W PUN1Q06991 263 aa7.79□□□□□ -1.16
SSU72YNL222W ALD4P46367 519 aaKnown RBP7.78□□□□□ -1.16
SSU72YNL222W JJJ3P47138 172 aa7.78□□□□□ -1.16
SSU72YNL222W KRE33P53914 1056 aaKnown RBP7.78□□□□□ -1.16
SSU72YNL222W TAF7Q05021 590 aa7.78□□□□□ -1.16
SSU72YNL222W TPS3P38426 1054 aaKnown RBP7.76□□□□□ -1.17
SSU72YNL222W ADE12P80210 433 aaKnown RBP7.76□□□□□ -1.17
SSU72YNL222W CWC15Q03772 175 aaKnown RBP7.76□□□□□ -1.17
SSU72YNL222W MTO1P53070 669 aa7.75□□□□□ -1.17
SSU72YNL222W UTP4Q06679 776 aaKnown RBP7.75□□□□□ -1.17
SSU72YNL222W SYT1Q06836 1226 aa7.75□□□□□ -1.17
SSU72YNL222W SRS2P12954 1174 aa7.74□□□□□ -1.17
SSU72YNL222W RGP1P16664 663 aa7.74□□□□□ -1.17
SSU72YNL222W YBR197CP38306 217 aa7.74□□□□□ -1.17
SSU72YNL222W SPR3P41901 512 aa7.73□□□□□ -1.17
SSU72YNL222W YDR461C-AQ2V2P7 80 aa7.73□□□□□ -1.17
SSU72YNL222W SSA1P10591 642 aaKnown RBP7.72□□□□□ -1.17
SSU72YNL222W ISC10P32645 267 aa7.72□□□□□ -1.17
SSU72YNL222W RPL34AP87262 121 aaPredicted RBP7.72□□□□□ -1.17
SSU72YNL222W MTC5Q03897 1148 aa7.72□□□□□ -1.17
SSU72YNL222W MRPL33P20084 86 aa7.71□□□□□ -1.18
SSU72YNL222W FPS1P23900 669 aa7.71□□□□□ -1.18
SSU72YNL222W QDR2P40474 542 aa7.71□□□□□ -1.18
SSU72YNL222W PNP1Q05788 311 aa7.71□□□□□ -1.18
SSU72YNL222W VMA3P25515 160 aa7.69□□□□□ -1.18
SSU72YNL222W KAP122P32767 1081 aa7.69□□□□□ -1.18
SSU72YNL222W ICP55P40051 511 aa7.69□□□□□ -1.18
SSU72YNL222W CUS1Q02554 436 aaPredicted RBP7.68□□□□□ -1.18
SSU72YNL222W RPC31P17890 251 aa7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms