RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C YFL034WP43564 1073 aa5.24□□□□□ -1.57
WHI3YNL197C PUS5Q06244 254 aa5.24□□□□□ -1.57
WHI3YNL197C FUR4P05316 633 aaKnown RBP5.24□□□□□ -1.57
WHI3YNL197C BOI1P38041 980 aaKnown RBP5.24□□□□□ -1.57
WHI3YNL197C QDR1P40475 563 aa5.24□□□□□ -1.57
WHI3YNL197C TRS33Q99394 268 aa5.24□□□□□ -1.57
WHI3YNL197C SWI5P08153 709 aa5.23□□□□□ -1.57
WHI3YNL197C NGR1P32831 672 aaKnown RBP5.23□□□□□ -1.57
WHI3YNL197C CST6P40535 587 aa5.23□□□□□ -1.57
WHI3YNL197C NOP7P53261 605 aaKnown RBP5.23□□□□□ -1.57
WHI3YNL197C YPL062WQ02781 134 aa5.23□□□□□ -1.57
WHI3YNL197C ISU1Q03020 165 aa5.23□□□□□ -1.57
WHI3YNL197C NUT2Q06213 157 aa5.23□□□□□ -1.57
WHI3YNL197C LSO1Q3E827 93 aa5.23□□□□□ -1.57
WHI3YNL197C SPT2P06843 333 aaPredicted RBP5.22□□□□□ -1.57
WHI3YNL197C RPS6AP0CX37 236 aaKnown RBP5.22□□□□□ -1.57
WHI3YNL197C RPS6BP0CX38 236 aaPredicted RBP5.22□□□□□ -1.57
WHI3YNL197C KIP2P28743 706 aa5.22□□□□□ -1.57
WHI3YNL197C GLO3P38682 493 aaKnown RBP5.22□□□□□ -1.57
WHI3YNL197C ACF4P47129 309 aa5.22□□□□□ -1.57
WHI3YNL197C ASF1P32447 279 aa5.22□□□□□ -1.57
WHI3YNL197C FBP26P32604 452 aa5.22□□□□□ -1.57
WHI3YNL197C SYH1Q02875 849 aaKnown RBP5.22□□□□□ -1.57
WHI3YNL197C CYT1P07143 309 aa5.21□□□□□ -1.58
WHI3YNL197C KTR2P33550 425 aa5.21□□□□□ -1.58
WHI3YNL197C CAB1Q04430 367 aa5.21□□□□□ -1.58
WHI3YNL197C STB3Q12427 513 aa5.21□□□□□ -1.58
WHI3YNL197C MET4P32389 672 aa5.2□□□□□ -1.58
WHI3YNL197C MRT4P33201 236 aaKnown RBP5.2□□□□□ -1.58
WHI3YNL197C POL32P47110 350 aa5.2□□□□□ -1.58
WHI3YNL197C YBR197CP38306 217 aa5.2□□□□□ -1.58
WHI3YNL197C APC11Q12157 165 aa5.19□□□□□ -1.58
WHI3YNL197C STE6P12866 1290 aa5.18□□□□□ -1.58
WHI3YNL197C UTR2P32623 467 aa5.18□□□□□ -1.58
WHI3YNL197C BRE2P43132 505 aa5.18□□□□□ -1.58
WHI3YNL197C GPI13Q07830 1017 aa5.18□□□□□ -1.58
WHI3YNL197C YBL086CP38177 466 aa5.18□□□□□ -1.58
WHI3YNL197C FRK1Q03002 865 aaPredicted RBP5.18□□□□□ -1.58
WHI3YNL197C YPQ2Q06328 317 aa5.18□□□□□ -1.58
WHI3YNL197C MKS1P34072 584 aa5.17□□□□□ -1.58
WHI3YNL197C HXT5P38695 592 aa5.17□□□□□ -1.58
WHI3YNL197C MET10P39692 1035 aa5.17□□□□□ -1.58
WHI3YNL197C MNL2Q12205 849 aa5.17□□□□□ -1.58
WHI3YNL197C RPB10P22139 70 aa5.16□□□□□ -1.58
WHI3YNL197C AIR1P40507 360 aaKnown RBP5.16□□□□□ -1.58
WHI3YNL197C YJR107WP47145 328 aa5.16□□□□□ -1.58
WHI3YNL197C ISC10P32645 267 aa5.16□□□□□ -1.58
WHI3YNL197C TRS120Q04183 1289 aa5.16□□□□□ -1.58
WHI3YNL197C THI12P42883 340 aa5.15□□□□□ -1.58
WHI3YNL197C THI5P43534 340 aa5.15□□□□□ -1.58
WHI3YNL197C THI11P47183 340 aa5.15□□□□□ -1.58
WHI3YNL197C CWH41P53008 833 aa5.15□□□□□ -1.58
WHI3YNL197C GCR2Q01722 534 aa5.15□□□□□ -1.58
WHI3YNL197C THI13Q07748 340 aa5.15□□□□□ -1.58
WHI3YNL197C WTM2Q12206 467 aa5.15□□□□□ -1.58
WHI3YNL197C SEC8P32855 1065 aa5.15□□□□□ -1.59
WHI3YNL197C CLA4P48562 842 aa5.15□□□□□ -1.59
WHI3YNL197C FOX2Q02207 900 aaKnown RBP5.15□□□□□ -1.59
WHI3YNL197C DFG5Q05031 458 aa5.15□□□□□ -1.59
WHI3YNL197C SPR3P41901 512 aa5.14□□□□□ -1.59
WHI3YNL197C MCM1P11746 286 aa5.13□□□□□ -1.59
WHI3YNL197C PHO4P07270 312 aaKnown RBP5.13□□□□□ -1.59
WHI3YNL197C DAT1P13483 248 aaKnown RBP5.13□□□□□ -1.59
WHI3YNL197C OYE2Q03558 400 aaKnown RBP5.13□□□□□ -1.59
WHI3YNL197C MRPL33P20084 86 aa5.12□□□□□ -1.59
WHI3YNL197C GAR1P28007 205 aaKnown RBP5.12□□□□□ -1.59
WHI3YNL197C TBS1P38114 1094 aa5.12□□□□□ -1.59
WHI3YNL197C SUM1P46676 1062 aa5.12□□□□□ -1.59
WHI3YNL197C HED1Q03937 162 aa5.12□□□□□ -1.59
WHI3YNL197C UTP7P40055 554 aaKnown RBP5.11□□□□□ -1.59
WHI3YNL197C FYV10P40492 516 aa5.11□□□□□ -1.59
WHI3YNL197C GBP2P25555 427 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
WHI3YNL197C MET1P36150 593 aa5.11□□□□□ -1.59
WHI3YNL197C YNL165WP53891 406 aa5.11□□□□□ -1.59
WHI3YNL197C BDS1Q08347 646 aa5.11□□□□□ -1.59
WHI3YNL197C DAK2P43550 591 aa5.1□□□□□ -1.59
WHI3YNL197C UFD2P54860 961 aa5.1□□□□□ -1.59
WHI3YNL197C SVF1Q05515 481 aa5.1□□□□□ -1.59
WHI3YNL197C MET32Q12041 191 aa5.1□□□□□ -1.59
WHI3YNL197C SCD5P34758 872 aa5.09□□□□□ -1.59
WHI3YNL197C CDC4P07834 779 aa5.09□□□□□ -1.6
WHI3YNL197C MGE1P38523 228 aa5.09□□□□□ -1.6
WHI3YNL197C SUT1P53032 299 aaKnown RBP5.08□□□□□ -1.6
WHI3YNL197C MAG2Q06436 670 aaKnown RBP5.08□□□□□ -1.6
WHI3YNL197C UTP4Q06679 776 aaKnown RBP5.08□□□□□ -1.6
WHI3YNL197C AIM44Q99299 758 aa5.08□□□□□ -1.6
WHI3YNL197C RPP2BP02400 110 aaKnown RBP5.07□□□□□ -1.6
WHI3YNL197C VMA3P25515 160 aa5.07□□□□□ -1.6
WHI3YNL197C RPT1P33299 467 aaKnown RBP5.07□□□□□ -1.6
WHI3YNL197C OCA5P38738 679 aa5.07□□□□□ -1.6
WHI3YNL197C SSN3P39073 555 aa5.07□□□□□ -1.6
WHI3YNL197C CDC55Q00362 526 aa5.07□□□□□ -1.6
WHI3YNL197C SPR28Q04921 423 aa5.07□□□□□ -1.6
WHI3YNL197C TOS4Q06266 489 aa5.07□□□□□ -1.6
WHI3YNL197C RPS31P05759 152 aaKnown RBP5.05□□□□□ -1.6
WHI3YNL197C MCM2P29469 868 aa5.05□□□□□ -1.6
WHI3YNL197C MLF3P32047 452 aa5.05□□□□□ -1.6
WHI3YNL197C SHM1P37292 490 aaPredicted RBP5.05□□□□□ -1.6
WHI3YNL197C DLD3P39976 496 aaKnown RBP5.05□□□□□ -1.6
WHI3YNL197C HXT8P40886 569 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms