RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W TY1A-DR3Q12441 440 aa7.42□□□□□ -1.22
ROT1YMR200W SLA1P32790 1244 aa7.41□□□□□ -1.22
ROT1YMR200W HPF1Q05164 967 aa7.41□□□□□ -1.22
ROT1YMR200W YPR204WQ08995 1032 aa7.41□□□□□ -1.22
ROT1YMR200W YGR035CP53222 116 aa7.4□□□□□ -1.22
ROT1YMR200W AIM44Q99299 758 aa7.4□□□□□ -1.22
ROT1YMR200W PEP12P32854 288 aa7.39□□□□□ -1.23
ROT1YMR200W SUM1P46676 1062 aa7.39□□□□□ -1.23
ROT1YMR200W MSN5P52918 1224 aa7.39□□□□□ -1.23
ROT1YMR200W AIM9P40053 627 aaKnown RBP7.37□□□□□ -1.23
ROT1YMR200W SWI5P08153 709 aa7.35□□□□□ -1.23
ROT1YMR200W UBP15P50101 1230 aa7.34□□□□□ -1.23
ROT1YMR200W YPQ2Q06328 317 aa7.34□□□□□ -1.23
ROT1YMR200W TRK2P28584 889 aa7.33□□□□□ -1.24
ROT1YMR200W SHM1P37292 490 aaPredicted RBP7.33□□□□□ -1.24
ROT1YMR200W AHP1P38013 176 aaKnown RBP7.33□□□□□ -1.24
ROT1YMR200W JJJ2P46997 583 aa7.33□□□□□ -1.24
ROT1YMR200W CUZ1P53899 274 aa7.33□□□□□ -1.24
ROT1YMR200W RPS6AP0CX37 236 aaKnown RBP7.32□□□□□ -1.24
ROT1YMR200W RPS6BP0CX38 236 aaPredicted RBP7.32□□□□□ -1.24
ROT1YMR200W PDI1P17967 522 aaKnown RBP7.32□□□□□ -1.24
ROT1YMR200W KTR7P40504 517 aa7.32□□□□□ -1.24
ROT1YMR200W ALA1P40825 983 aaKnown RBP7.32□□□□□ -1.24
ROT1YMR200W NTH2P35172 780 aa7.3□□□□□ -1.24
ROT1YMR200W TSC13Q99190 310 aa7.3□□□□□ -1.24
ROT1YMR200W YFL034WP43564 1073 aa7.29□□□□□ -1.24
ROT1YMR200W NAP1P25293 417 aaKnown RBP7.28□□□□□ -1.24
ROT1YMR200W IRE1P32361 1115 aa7.28□□□□□ -1.24
ROT1YMR200W JJJ3P47138 172 aa7.28□□□□□ -1.24
ROT1YMR200W ACS2P52910 683 aaKnown RBP7.28□□□□□ -1.24
ROT1YMR200W RPS31P05759 152 aaKnown RBP7.27□□□□□ -1.25
ROT1YMR200W LYS5P50113 272 aa7.27□□□□□ -1.25
ROT1YMR200W PSH1Q12161 406 aa7.27□□□□□ -1.25
ROT1YMR200W DPH6Q12429 685 aa7.27□□□□□ -1.25
ROT1YMR200W YNL165WP53891 406 aa7.26□□□□□ -1.25
ROT1YMR200W DIT1P21623 536 aa7.25□□□□□ -1.25
ROT1YMR200W PHO87P25360 923 aa7.25□□□□□ -1.25
ROT1YMR200W PDC6P26263 563 aaKnown RBP7.25□□□□□ -1.25
ROT1YMR200W TTI1P36097 1038 aa7.25□□□□□ -1.25
ROT1YMR200W YMR265CQ03508 461 aaKnown RBP7.25□□□□□ -1.25
ROT1YMR200W SIS2P36024 562 aa7.24□□□□□ -1.25
ROT1YMR200W CEM1P39525 442 aa7.24□□□□□ -1.25
ROT1YMR200W CYT1P07143 309 aa7.23□□□□□ -1.25
ROT1YMR200W MCM1P11746 286 aa7.23□□□□□ -1.25
ROT1YMR200W SYT1Q06836 1226 aa7.23□□□□□ -1.25
ROT1YMR200W GAL2P13181 574 aa7.22□□□□□ -1.25
ROT1YMR200W KRE33P53914 1056 aaKnown RBP7.22□□□□□ -1.25
ROT1YMR200W TGL4P36165 910 aa7.21□□□□□ -1.26
ROT1YMR200W ROM1P53046 1155 aa7.21□□□□□ -1.26
ROT1YMR200W IOC4Q04213 475 aa7.21□□□□□ -1.26
ROT1YMR200W HAP4P14064 554 aa7.2□□□□□ -1.26
ROT1YMR200W ADE12P80210 433 aaKnown RBP7.2□□□□□ -1.26
ROT1YMR200W GAS4Q08271 471 aa7.2□□□□□ -1.26
ROT1YMR200W YDR461C-AQ2V2P7 80 aa7.2□□□□□ -1.26
ROT1YMR200W CPS1P27614 576 aa7.19□□□□□ -1.26
ROT1YMR200W ALD2P47771 506 aa7.19□□□□□ -1.26
ROT1YMR200W UBP1P25037 809 aa7.18□□□□□ -1.26
ROT1YMR200W MLF3P32047 452 aa7.18□□□□□ -1.26
ROT1YMR200W MRPL16P38064 232 aa7.18□□□□□ -1.26
ROT1YMR200W LEU1P07264 779 aaKnown RBP7.17□□□□□ -1.26
ROT1YMR200W ECM23Q02710 187 aa7.17□□□□□ -1.26
ROT1YMR200W STB3Q12427 513 aa7.17□□□□□ -1.26
ROT1YMR200W Q0182Q9ZZW1 134 aa7.17□□□□□ -1.26
ROT1YMR200W MDJ1P35191 511 aa7.15□□□□□ -1.26
ROT1YMR200W PUP1P25043 261 aa7.14□□□□□ -1.27
ROT1YMR200W SPR3P41901 512 aa7.14□□□□□ -1.27
ROT1YMR200W ORC1P54784 914 aaPredicted RBP7.14□□□□□ -1.27
ROT1YMR200W HXT5P38695 592 aa7.13□□□□□ -1.27
ROT1YMR200W FPS1P23900 669 aa7.12□□□□□ -1.27
ROT1YMR200W NGR1P32831 672 aaKnown RBP7.12□□□□□ -1.27
ROT1YMR200W YTA6P40328 754 aa7.12□□□□□ -1.27
ROT1YMR200W YFL066CP43538 392 aa7.12□□□□□ -1.27
ROT1YMR200W YML020WQ03722 664 aa7.12□□□□□ -1.27
ROT1YMR200W RGP1P16664 663 aa7.11□□□□□ -1.27
ROT1YMR200W SUV3P32580 737 aa7.11□□□□□ -1.27
ROT1YMR200W UBX7P38349 436 aa7.11□□□□□ -1.27
ROT1YMR200W NSG2P53898 299 aa7.1□□□□□ -1.27
ROT1YMR200W GPM1P00950 247 aaKnown RBP7.09□□□□□ -1.27
ROT1YMR200W AI1P03875 834 aa7.09□□□□□ -1.27
ROT1YMR200W VAN1P23642 535 aa7.09□□□□□ -1.27
ROT1YMR200W THI72Q08579 599 aa7.09□□□□□ -1.27
ROT1YMR200W SCD5P34758 872 aa7.08□□□□□ -1.28
ROT1YMR200W MSC7P38694 644 aa7.08□□□□□ -1.28
ROT1YMR200W ICP55P40051 511 aa7.08□□□□□ -1.28
ROT1YMR200W SBE2P42223 864 aaKnown RBP7.08□□□□□ -1.28
ROT1YMR200W MTO1P53070 669 aa7.08□□□□□ -1.28
ROT1YMR200W TY1A-DR2Q03964 440 aaKnown RBP7.08□□□□□ -1.28
ROT1YMR200W YML083CQ04526 418 aa7.08□□□□□ -1.28
ROT1YMR200W UTP4Q06679 776 aaKnown RBP7.08□□□□□ -1.28
ROT1YMR200W CAB1Q04430 367 aa7.07□□□□□ -1.28
ROT1YMR200W PHM7Q12252 991 aa7.06□□□□□ -1.28
ROT1YMR200W TRS33Q99394 268 aa7.06□□□□□ -1.28
ROT1YMR200W NOB1Q08444 459 aaKnown RBP7.05□□□□□ -1.28
ROT1YMR200W MTC5Q03897 1148 aa7.04□□□□□ -1.28
ROT1YMR200W PDC5P16467 563 aaKnown RBP7.03□□□□□ -1.28
ROT1YMR200W FOX2Q02207 900 aaKnown RBP7.03□□□□□ -1.28
ROT1YMR200W NOP8Q08287 484 aaPredicted RBP7.03□□□□□ -1.28
ROT1YMR200W PUS1Q12211 544 aaKnown RBP7.03□□□□□ -1.28
ROT1YMR200W KAP122P32767 1081 aa7.02□□□□□ -1.29
ROT1YMR200W QDR2P40474 542 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms