RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	DPS1	P04802	557 aa	Known RBP	6.24	□□□□□ -1.41
SIS2	YKR072C	RPA135	P22138	1203 aa	Known RBP	6.24	□□□□□ -1.41
SIS2	YKR072C	PEP7	P32609	515 aa		6.24	□□□□□ -1.41
SIS2	YKR072C	SEC6	P32844	805 aa		6.24	□□□□□ -1.41
SIS2	YKR072C	RPT1	P33299	467 aa	Known RBP	6.24	□□□□□ -1.41
SIS2	YKR072C	YEN1	P40028	759 aa		6.24	□□□□□ -1.41
SIS2	YKR072C	ATG3	P40344	310 aa		6.24	□□□□□ -1.41
SIS2	YKR072C	AIM21	P40563	679 aa		6.24	□□□□□ -1.41
SIS2	YKR072C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
SIS2	YKR072C	ACS2	P52910	683 aa	Known RBP	6.23	□□□□□ -1.41
SIS2	YKR072C	CWC24	P53769	259 aa		6.23	□□□□□ -1.41
SIS2	YKR072C	PIB1	Q06651	286 aa		6.23	□□□□□ -1.41
SIS2	YKR072C	PWP2	P25635	923 aa	Known RBP	6.23	□□□□□ -1.41
SIS2	YKR072C	GAS4	Q08271	471 aa		6.23	□□□□□ -1.41
SIS2	YKR072C	TFB4	Q12004	338 aa		6.23	□□□□□ -1.41
SIS2	YKR072C	TRM1	P15565	570 aa	Known RBP	6.22	□□□□□ -1.41
SIS2	YKR072C	MNR2	P35724	969 aa		6.22	□□□□□ -1.41
SIS2	YKR072C	NOC2	P39744	710 aa	Known RBP	6.22	□□□□□ -1.41
SIS2	YKR072C	NUP82	P40368	713 aa		6.22	□□□□□ -1.41
SIS2	YKR072C	DNM1	P54861	757 aa		6.22	□□□□□ -1.41
SIS2	YKR072C	PHO4	P07270	312 aa	Known RBP	6.21	□□□□□ -1.42
SIS2	YKR072C	DPB3	P27344	201 aa		6.21	□□□□□ -1.42
SIS2	YKR072C	VPS24	P36095	224 aa	Known RBP	6.21	□□□□□ -1.42
SIS2	YKR072C	ENP1	P38333	483 aa	Known RBP	6.21	□□□□□ -1.42
SIS2	YKR072C	RPT2	P40327	437 aa	Known RBP	6.21	□□□□□ -1.42
SIS2	YKR072C	SPR3	P41901	512 aa		6.21	□□□□□ -1.42
SIS2	YKR072C	NKP1	Q12493	238 aa		6.21	□□□□□ -1.42
SIS2	YKR072C	VAN1	P23642	535 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	MFT1	P33441	392 aa	Known RBP	6.2	□□□□□ -1.42
SIS2	YKR072C	VPS27	P40343	622 aa	Known RBP	6.2	□□□□□ -1.42
SIS2	YKR072C	SET4	P42948	560 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	HUL5	P53119	910 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	ITC1	P53125	1264 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	YNL115C	P53925	644 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	GIR2	Q03768	265 aa	Predicted RBP	6.2	□□□□□ -1.42
SIS2	YKR072C	TRS120	Q04183	1289 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	LSO1	Q3E827	93 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	RAD2	P07276	1031 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	MRC1	P25588	1096 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	TOA1	P32773	286 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	PET112	P33893	541 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	CRP1	P38845	465 aa	Known RBP	6.2	□□□□□ -1.42
SIS2	YKR072C	RTF1	P53064	558 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	MTO1	P53070	669 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	PUS6	P53294	404 aa		6.2	□□□□□ -1.42
SIS2	YKR072C	VMS1	Q04311	632 aa	Known RBP	6.2	□□□□□ -1.42
SIS2	YKR072C	PHO8	P11491	566 aa		6.19	□□□□□ -1.42
SIS2	YKR072C	GRX1	P25373	110 aa	Known RBP	6.19	□□□□□ -1.42
SIS2	YKR072C	GCD6	P32501	712 aa	Known RBP	6.19	□□□□□ -1.42
SIS2	YKR072C	MPE1	P35728	441 aa	Known RBP	6.19	□□□□□ -1.42
SIS2	YKR072C	RPS26A	P39938	119 aa	Known RBP	6.19	□□□□□ -1.42
SIS2	YKR072C	RPS26B	P39939	119 aa	Known RBP	6.19	□□□□□ -1.42
SIS2	YKR072C	KRI1	P42846	591 aa	Known RBP	6.19	□□□□□ -1.42
SIS2	YKR072C	PEX21	P50091	288 aa		6.19	□□□□□ -1.42
SIS2	YKR072C	SRC1	Q03707	834 aa		6.19	□□□□□ -1.42
SIS2	YKR072C	GYP5	Q12344	894 aa		6.19	□□□□□ -1.42
SIS2	YKR072C	TSC13	Q99190	310 aa		6.19	□□□□□ -1.42
SIS2	YKR072C	TRS33	Q99394	268 aa		6.19	□□□□□ -1.42
SIS2	YKR072C	BOI1	P38041	980 aa	Known RBP	6.18	□□□□□ -1.42
SIS2	YKR072C	DAK2	P43550	591 aa		6.18	□□□□□ -1.42
SIS2	YKR072C	COG4	Q06096	861 aa		6.18	□□□□□ -1.42
SIS2	YKR072C	GPI13	Q07830	1017 aa		6.18	□□□□□ -1.42
SIS2	YKR072C	SAM3	Q08986	587 aa		6.18	□□□□□ -1.42
SIS2	YKR072C	YLR125W	Q12138	136 aa		6.18	□□□□□ -1.42
SIS2	YKR072C	SRM1	P21827	482 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	TRX2	P22803	104 aa	Known RBP	6.17	□□□□□ -1.42
SIS2	YKR072C	VRP1	P37370	817 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	FUI1	P38196	639 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	TAT2	P38967	592 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	NST1	P53935	1240 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	UTP13	Q05946	817 aa	Known RBP	6.17	□□□□□ -1.42
SIS2	YKR072C	PPM2	Q08282	695 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	AI4	P03878	556 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	THS1	P04801	734 aa	Known RBP	6.17	□□□□□ -1.42
SIS2	YKR072C	PAF1	P38351	445 aa		6.17	□□□□□ -1.42
SIS2	YKR072C	CHZ1	P40019	153 aa	Predicted RBP	6.17	□□□□□ -1.42
SIS2	YKR072C	STE20	Q03497	939 aa	Known RBP	6.17	□□□□□ -1.42
SIS2	YKR072C	TUM1	Q08686	304 aa	Known RBP	6.17	□□□□□ -1.42
SIS2	YKR072C	MPH3	P0CE00	602 aa		6.16	□□□□□ -1.42
SIS2	YKR072C	TIM23	P32897	222 aa		6.16	□□□□□ -1.42
SIS2	YKR072C	FOL1	P53848	824 aa		6.16	□□□□□ -1.42
SIS2	YKR072C	FRA1	Q07825	749 aa		6.16	□□□□□ -1.42
SIS2	YKR072C	SOH1	P38633	127 aa		6.15	□□□□□ -1.42
SIS2	YKR072C	POL5	P39985	1022 aa	Known RBP	6.15	□□□□□ -1.42
SIS2	YKR072C	YGR122W	P53272	402 aa		6.15	□□□□□ -1.42
SIS2	YKR072C	TBF1	Q02457	562 aa		6.15	□□□□□ -1.42
SIS2	YKR072C	RAD4	P14736	754 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	CYC8	P14922	966 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	PDI1	P17967	522 aa	Known RBP	6.14	□□□□□ -1.43
SIS2	YKR072C	RAD27	P26793	382 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	GUT2	P32191	649 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	VPS35	P34110	944 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	ESF2	P53743	316 aa	Known RBP	6.14	□□□□□ -1.43
SIS2	YKR072C	NAN1	Q02931	896 aa	Known RBP	6.14	□□□□□ -1.43
SIS2	YKR072C	INO80	P53115	1489 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	THI4	P32318	326 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	ISW1	P38144	1129 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	SLI15	P38283	698 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	ILV3	P39522	585 aa	Known RBP	6.14	□□□□□ -1.43
SIS2	YKR072C	IES1	P43579	692 aa		6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms