RNA–Protein interactions for RNA: YKL224C

PAU16, Transcript of Protein of unknown function, yeast

Gene PAU16, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAU16	YKL224C	SYF1	Q04048	859 aa	Predicted RBP	13.71	□□□□□ -0.21
PAU16	YKL224C	HAT1	Q12341	374 aa		13.71	□□□□□ -0.21
PAU16	YKL224C	DPL1	Q05567	589 aa		13.7	□□□□□ -0.22
PAU16	YKL224C	VPS64	Q03944	604 aa		13.69	□□□□□ -0.22
PAU16	YKL224C	MSM1	P22438	575 aa		13.67	□□□□□ -0.22
PAU16	YKL224C	YIL089W	P40500	205 aa		13.67	□□□□□ -0.22
PAU16	YKL224C	GLC3	P32775	704 aa		13.66	□□□□□ -0.22
PAU16	YKL224C	TIM50	Q02776	476 aa		13.66	□□□□□ -0.22
PAU16	YKL224C	COQ4	O13525	335 aa		13.65	□□□□□ -0.22
PAU16	YKL224C	SET4	P42948	560 aa		13.65	□□□□□ -0.22
PAU16	YKL224C	PRD1	P25375	712 aa		13.64	□□□□□ -0.23
PAU16	YKL224C	RTR1	P40084	226 aa	Predicted RBP	13.64	□□□□□ -0.23
PAU16	YKL224C	ZDS1	P50111	915 aa	Known RBP	13.63	□□□□□ -0.23
PAU16	YKL224C	PSD2	P53037	1138 aa	Known RBP	13.63	□□□□□ -0.23
PAU16	YKL224C	AIM7	Q12156	149 aa		13.63	□□□□□ -0.23
PAU16	YKL224C	TRM44	Q02648	567 aa	Known RBP	13.62	□□□□□ -0.23
PAU16	YKL224C	BMS1	Q08965	1183 aa	Known RBP	13.62	□□□□□ -0.23
PAU16	YKL224C	YBR287W	P38355	427 aa		13.6	□□□□□ -0.23
PAU16	YKL224C	EMP47	P43555	445 aa		13.6	□□□□□ -0.23
PAU16	YKL224C	VPS4	P52917	437 aa		13.6	□□□□□ -0.23
PAU16	YKL224C	YLR271W	Q06152	274 aa		13.6	□□□□□ -0.23
PAU16	YKL224C	STV1	P37296	890 aa		13.59	□□□□□ -0.23
PAU16	YKL224C	MAM1	P40065	302 aa		13.59	□□□□□ -0.23
PAU16	YKL224C	PEA2	P40091	420 aa		13.59	□□□□□ -0.23
PAU16	YKL224C	FCP1	Q03254	732 aa		13.59	□□□□□ -0.23
PAU16	YKL224C	GAS5	Q08193	484 aa		13.58	□□□□□ -0.24
PAU16	YKL224C	YGR117C	P53270	476 aa		13.57	□□□□□ -0.24
PAU16	YKL224C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	13.56	□□□□□ -0.24	not detected
PAU16	YKL224C	PKH1	Q03407	766 aa		13.56	□□□□□ -0.24
PAU16	YKL224C	THI22	Q06490	572 aa		13.56	□□□□□ -0.24
PAU16	YKL224C	YOL057W	Q08225	711 aa		13.55	□□□□□ -0.24
PAU16	YKL224C	SWI1	P09547	1314 aa		13.55	□□□□□ -0.24
PAU16	YKL224C	AFG2	P32794	780 aa		13.54	□□□□□ -0.24
PAU16	YKL224C	TRP5	P00931	707 aa	Known RBP	13.53	□□□□□ -0.24
PAU16	YKL224C	HPR1	P17629	752 aa	Known RBP	13.53	□□□□□ -0.24
PAU16	YKL224C	KRE2	P27809	442 aa		13.53	□□□□□ -0.24
PAU16	YKL224C	RTT109	Q07794	436 aa		13.53	□□□□□ -0.24
PAU16	YKL224C	TYW1	Q08960	810 aa	Known RBP	13.53	□□□□□ -0.24
PAU16	YKL224C	TIF4632	P39936	914 aa	Known RBP	13.52	□□□□□ -0.25
PAU16	YKL224C	CWC15	Q03772	175 aa	Known RBP	13.52	□□□□□ -0.25
PAU16	YKL224C	DPH6	Q12429	685 aa		13.52	□□□□□ -0.25
PAU16	YKL224C	GSC2	P40989	1895 aa		13.52	□□□□□ -0.25
PAU16	YKL224C	FLO11	P08640	1367 aa		13.51	□□□□□ -0.25
PAU16	YKL224C	RRG1	Q12167	365 aa	Predicted RBP	13.51	□□□□□ -0.25
PAU16	YKL224C	ICP55	P40051	511 aa		13.5	□□□□□ -0.25
PAU16	YKL224C	GYP7	P48365	746 aa		13.5	□□□□□ -0.25
PAU16	YKL224C	IOC4	Q04213	475 aa		13.5	□□□□□ -0.25
PAU16	YKL224C	SPL2	P38839	148 aa		13.49	□□□□□ -0.25
PAU16	YKL224C	DNM1	P54861	757 aa		13.49	□□□□□ -0.25
PAU16	YKL224C	TIF6	Q12522	245 aa	Known RBP	13.49	□□□□□ -0.25
PAU16	YKL224C	MPP10	P47083	593 aa	Known RBP	13.48	□□□□□ -0.25
PAU16	YKL224C	RPT4	P53549	437 aa	Known RBP	13.48	□□□□□ -0.25
PAU16	YKL224C	CRF1	Q04930	467 aa		13.48	□□□□□ -0.25
PAU16	YKL224C	YDR306C	Q06640	478 aa		13.48	□□□□□ -0.25
PAU16	YKL224C	DUR1,2	P32528	1835 aa	Known RBP	13.48	□□□□□ -0.25
PAU16	YKL224C	SDH2	P21801	266 aa		13.47	□□□□□ -0.25
PAU16	YKL224C	SRF1	Q12516	437 aa		13.47	□□□□□ -0.25
PAU16	YKL224C	CST6	P40535	587 aa		13.46	□□□□□ -0.25
PAU16	YKL224C	YJR008W	P47085	338 aa		13.46	□□□□□ -0.25
PAU16	YKL224C	UBX2	Q04228	584 aa		13.46	□□□□□ -0.25
PAU16	YKL224C	HVG1	P0CE11	249 aa		13.45	□□□□□ -0.26
PAU16	YKL224C	GSM1	P42950	618 aa		13.45	□□□□□ -0.26
PAU16	YKL224C	NUP133	P36161	1157 aa		13.44	□□□□□ -0.26
PAU16	YKL224C	HEF3	P53978	1044 aa	Known RBP	13.44	□□□□□ -0.26
PAU16	YKL224C	CSR2	Q12734	1121 aa		13.44	□□□□□ -0.26
PAU16	YKL224C	SAC3	P46674	1301 aa		13.43	□□□□□ -0.26
PAU16	YKL224C	PNT1	P38969	423 aa		13.43	□□□□□ -0.26
PAU16	YKL224C	MGM1	P32266	881 aa		13.42	□□□□□ -0.26
PAU16	YKL224C	BSD2	P38356	321 aa		13.42	□□□□□ -0.26
PAU16	YKL224C	SRT1	Q03175	343 aa		13.42	□□□□□ -0.26
PAU16	YKL224C	THI3	Q07471	609 aa		13.42	□□□□□ -0.26
PAU16	YKL224C	CBP1	P07252	654 aa		13.41	□□□□□ -0.26
PAU16	YKL224C	MRP7	P12687	371 aa		13.41	□□□□□ -0.26
PAU16	YKL224C	NGR1	P32831	672 aa	Known RBP	13.41	□□□□□ -0.26
PAU16	YKL224C	SET1	P38827	1080 aa	Known RBP	13.41	□□□□□ -0.26
PAU16	YKL224C	ITC1	P53125	1264 aa		13.41	□□□□□ -0.26
PAU16	YKL224C	SEN54	Q02825	467 aa	Predicted RBP	13.4	□□□□□ -0.26
PAU16	YKL224C	TOS4	Q06266	489 aa		13.4	□□□□□ -0.26
PAU16	YKL224C	TPD3	P31383	635 aa		13.38	□□□□□ -0.27
PAU16	YKL224C	UTP7	P40055	554 aa	Known RBP	13.38	□□□□□ -0.27
PAU16	YKL224C	PRP42	Q03776	544 aa	Known RBP	13.38	□□□□□ -0.27
PAU16	YKL224C	PSH1	Q12161	406 aa		13.38	□□□□□ -0.27
PAU16	YKL224C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.37	□□□□□ -0.27	RIP-Chip
PAU16	YKL224C	CST9	Q06032	482 aa		13.37	□□□□□ -0.27
PAU16	YKL224C	RRT6	P53117	311 aa	Predicted RBP	13.36	□□□□□ -0.27
PAU16	YKL224C	YGR122W	P53272	402 aa		13.36	□□□□□ -0.27
PAU16	YKL224C	IRC4	Q03036	179 aa		13.36	□□□□□ -0.27
PAU16	YKL224C	NCS6	P53088	359 aa		13.35	□□□□□ -0.27
PAU16	YKL224C	YDL144C	Q07589	356 aa		13.35	□□□□□ -0.27
PAU16	YKL224C	LCB1	P25045	558 aa	Known RBP	13.34	□□□□□ -0.27
PAU16	YKL224C	RPS7A	P26786	190 aa	Known RBP	13.34	□□□□□ -0.27
PAU16	YKL224C	MTC3	P53077	123 aa		13.34	□□□□□ -0.27
PAU16	YKL224C	PIB1	Q06651	286 aa		13.34	□□□□□ -0.27
PAU16	YKL224C	ARG82	P07250	355 aa		13.33	□□□□□ -0.28
PAU16	YKL224C	MOT2	P34909	587 aa	Known RBP	13.33	□□□□□ -0.28
PAU16	YKL224C	MAC1	P35192	417 aa		13.32	□□□□□ -0.28
PAU16	YKL224C	APE3	P37302	537 aa	Known RBP	13.31	□□□□□ -0.28
PAU16	YKL224C	HXT10	P43581	546 aa		13.31	□□□□□ -0.28
PAU16	YKL224C	MTC5	Q03897	1148 aa		13.31	□□□□□ -0.28
PAU16	YKL224C	VPS13	Q07878	3144 aa		13.3	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms