RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MRX12P47084 519 aa6.29□□□□□ -1.4
PEP8YJL053W SPT2P06843 333 aaPredicted RBP6.28□□□□□ -1.4
PEP8YJL053W TAT1P38085 619 aa6.28□□□□□ -1.4
PEP8YJL053W EMP47P43555 445 aa6.28□□□□□ -1.4
PEP8YJL053W MAC1P35192 417 aa6.27□□□□□ -1.41
PEP8YJL053W AMN1P38285 549 aaPredicted RBP6.27□□□□□ -1.41
PEP8YJL053W SLN1P39928 1220 aaPredicted RBP6.27□□□□□ -1.41
PEP8YJL053W LSB6P42951 607 aa6.27□□□□□ -1.41
PEP8YJL053W YDR215CQ12240 137 aa6.27□□□□□ -1.41
PEP8YJL053W IRE1P32361 1115 aa6.26□□□□□ -1.41
PEP8YJL053W MCA1Q08601 432 aa6.26□□□□□ -1.41
PEP8YJL053W ISF1P32488 338 aa6.25□□□□□ -1.41
PEP8YJL053W MRPL16P38064 232 aa6.25□□□□□ -1.41
PEP8YJL053W SUM1P46676 1062 aa6.25□□□□□ -1.41
PEP8YJL053W JJJ2P46997 583 aa6.24□□□□□ -1.41
PEP8YJL053W GLT1Q12680 2145 aaKnown RBP6.23□□□□□ -1.41
PEP8YJL053W KNS1P32350 737 aaPredicted RBP6.22□□□□□ -1.41
PEP8YJL053W STB3Q12427 513 aa6.22□□□□□ -1.41
PEP8YJL053W CSE4P36012 229 aa6.21□□□□□ -1.42
PEP8YJL053W PDC5P16467 563 aaKnown RBP6.2□□□□□ -1.42
PEP8YJL053W MCM16Q12262 181 aa6.2□□□□□ -1.42
PEP8YJL053W APL6P46682 809 aa6.19□□□□□ -1.42
PEP8YJL053W SPT5P27692 1063 aaKnown RBP6.18□□□□□ -1.42
PEP8YJL053W HAL5P38970 855 aaKnown RBP6.18□□□□□ -1.42
PEP8YJL053W PDC6P26263 563 aaKnown RBP6.17□□□□□ -1.42
PEP8YJL053W SHM1P37292 490 aaPredicted RBP6.17□□□□□ -1.42
PEP8YJL053W SLX8P40072 274 aa6.17□□□□□ -1.42
PEP8YJL053W PSH1Q12161 406 aa6.17□□□□□ -1.42
PEP8YJL053W RPP1AP05318 106 aaPredicted RBP6.16□□□□□ -1.42
PEP8YJL053W ATG3P40344 310 aa6.16□□□□□ -1.42
PEP8YJL053W PRY1P47032 299 aa6.16□□□□□ -1.42
PEP8YJL053W HDA3Q06623 655 aa6.16□□□□□ -1.42
PEP8YJL053W SOH1P38633 127 aa6.15□□□□□ -1.42
PEP8YJL053W SPR3P41901 512 aa6.15□□□□□ -1.42
PEP8YJL053W ALO1P54783 526 aaKnown RBP6.15□□□□□ -1.42
PEP8YJL053W KIN1P13185 1064 aa6.14□□□□□ -1.43
PEP8YJL053W YBL036CP38197 257 aa6.14□□□□□ -1.43
PEP8YJL053W YPL034WQ03083 165 aa6.14□□□□□ -1.43
PEP8YJL053W TY1A-DR2Q03964 440 aaKnown RBP6.14□□□□□ -1.43
PEP8YJL053W YDJ1P25491 409 aaKnown RBP6.12□□□□□ -1.43
PEP8YJL053W OMA1P36163 345 aa6.12□□□□□ -1.43
PEP8YJL053W UTP13Q05946 817 aaKnown RBP6.12□□□□□ -1.43
PEP8YJL053W TFB3Q03290 321 aa6.11□□□□□ -1.43
PEP8YJL053W YPP1P46951 817 aa6.1□□□□□ -1.43
PEP8YJL053W HPC2Q01448 625 aa6.1□□□□□ -1.43
PEP8YJL053W IRC24P40580 263 aa6.09□□□□□ -1.43
PEP8YJL053W TPS3P38426 1054 aaKnown RBP6.08□□□□□ -1.44
PEP8YJL053W YTA6P40328 754 aa6.08□□□□□ -1.44
PEP8YJL053W NHA1Q99271 985 aa6.08□□□□□ -1.44
PEP8YJL053W RPS31P05759 152 aaKnown RBP6.07□□□□□ -1.44
PEP8YJL053W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
PEP8YJL053W SWI5P08153 709 aa6.05□□□□□ -1.44
PEP8YJL053W GUA1P38625 525 aaKnown RBP6.05□□□□□ -1.44
PEP8YJL053W LEU1P07264 779 aaKnown RBP6.04□□□□□ -1.44
PEP8YJL053W NAB2P32505 525 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
PEP8YJL053W ALG14P38242 237 aa6.04□□□□□ -1.44
PEP8YJL053W BRL1P38770 471 aa6.04□□□□□ -1.44
PEP8YJL053W PGM2P37012 569 aaKnown RBP6.03□□□□□ -1.44
PEP8YJL053W MSC7P38694 644 aa6.03□□□□□ -1.44
PEP8YJL053W YPQ2Q06328 317 aa6.03□□□□□ -1.44
PEP8YJL053W RGP1P16664 663 aa6.02□□□□□ -1.45
PEP8YJL053W INP52P50942 1183 aa6.02□□□□□ -1.45
PEP8YJL053W AIM9P40053 627 aaKnown RBP6.01□□□□□ -1.45
PEP8YJL053W BUD9P53226 547 aa6.01□□□□□ -1.45
PEP8YJL053W ALD2P47771 506 aa6□□□□□ -1.45
PEP8YJL053W YFL034WP43564 1073 aa5.99□□□□□ -1.45
PEP8YJL053W HEH2Q03281 663 aa5.99□□□□□ -1.45
PEP8YJL053W RPS6AP0CX37 236 aaKnown RBP5.97□□□□□ -1.45
PEP8YJL053W RPS6BP0CX38 236 aaPredicted RBP5.97□□□□□ -1.45
PEP8YJL053W AVT1P47082 602 aa5.97□□□□□ -1.45
PEP8YJL053W YNL165WP53891 406 aa5.97□□□□□ -1.45
PEP8YJL053W YNL108CP53929 270 aa5.97□□□□□ -1.45
PEP8YJL053W MCM1P11746 286 aa5.95□□□□□ -1.46
PEP8YJL053W MLF3P32047 452 aa5.95□□□□□ -1.46
PEP8YJL053W Q0182Q9ZZW1 134 aa5.95□□□□□ -1.46
PEP8YJL053W AI3P03877 415 aa5.94□□□□□ -1.46
PEP8YJL053W SAC7P17121 654 aa5.94□□□□□ -1.46
PEP8YJL053W NCL1P38205 684 aaKnown RBP5.94□□□□□ -1.46
PEP8YJL053W ENO2P00925 437 aaKnown RBP5.93□□□□□ -1.46
PEP8YJL053W COQ2P32378 372 aa5.93□□□□□ -1.46
PEP8YJL053W NTH2P35172 780 aa5.93□□□□□ -1.46
PEP8YJL053W MTO1P53070 669 aa5.93□□□□□ -1.46
PEP8YJL053W SUP45P12385 437 aaKnown RBP5.92□□□□□ -1.46
PEP8YJL053W NAR1P23503 491 aaKnown RBP5.92□□□□□ -1.46
PEP8YJL053W BIO2P32451 375 aa5.92□□□□□ -1.46
PEP8YJL053W RRM3P38766 723 aa5.92□□□□□ -1.46
PEP8YJL053W PRK1P40494 810 aa5.92□□□□□ -1.46
PEP8YJL053W ARI1P53111 347 aaKnown RBP5.91□□□□□ -1.46
PEP8YJL053W GIS4Q04233 774 aa5.91□□□□□ -1.46
PEP8YJL053W GAS5Q08193 484 aa5.91□□□□□ -1.46
PEP8YJL053W MED7Q08278 222 aa5.91□□□□□ -1.46
PEP8YJL053W KAE1P36132 386 aa5.9□□□□□ -1.46
PEP8YJL053W PDI1P17967 522 aaKnown RBP5.89□□□□□ -1.47
PEP8YJL053W PKC1P24583 1151 aa5.89□□□□□ -1.47
PEP8YJL053W LIP5P32875 414 aa5.89□□□□□ -1.47
PEP8YJL053W PGM1P33401 570 aaKnown RBP5.88□□□□□ -1.47
PEP8YJL053W RIM21P48565 533 aa5.87□□□□□ -1.47
PEP8YJL053W SFA1P32771 386 aa5.86□□□□□ -1.47
PEP8YJL053W TSC13Q99190 310 aa5.86□□□□□ -1.47
PEP8YJL053W CYT1P07143 309 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms