RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C TRS33Q99394 268 aa5.55□□□□□ -1.52
SEC9YGR009C FOB1O13329 566 aa5.55□□□□□ -1.52
SEC9YGR009C YEF3P16521 1044 aaKnown RBP5.55□□□□□ -1.52
SEC9YGR009C PET123P17558 318 aa5.55□□□□□ -1.52
SEC9YGR009C TIM54P47045 478 aa5.55□□□□□ -1.52
SEC9YGR009C HUL5P53119 910 aa5.55□□□□□ -1.52
SEC9YGR009C JJJ1P53863 590 aa5.55□□□□□ -1.52
SEC9YGR009C REX2P54964 269 aaKnown RBP5.55□□□□□ -1.52
SEC9YGR009C SMD2Q06217 110 aaKnown RBP5.55□□□□□ -1.52
SEC9YGR009C DPS1P04802 557 aaKnown RBP5.54□□□□□ -1.52
SEC9YGR009C NAT1P12945 854 aaKnown RBP5.54□□□□□ -1.52
SEC9YGR009C SEC23P15303 768 aaKnown RBP5.54□□□□□ -1.52
SEC9YGR009C PHO87P25360 923 aa5.54□□□□□ -1.52
SEC9YGR009C KRR1P25586 316 aaPredicted RBP5.54□□□□□ -1.52
SEC9YGR009C PAF1P38351 445 aa5.54□□□□□ -1.52
SEC9YGR009C ETP1P38748 585 aaKnown RBP5.54□□□□□ -1.52
SEC9YGR009C RAD17P48581 401 aa5.54□□□□□ -1.52
SEC9YGR009C PEX21P50091 288 aa5.54□□□□□ -1.52
SEC9YGR009C CIT2P08679 460 aa5.53□□□□□ -1.52
SEC9YGR009C KAR3P17119 729 aa5.53□□□□□ -1.52
SEC9YGR009C GRX7P38068 203 aa5.53□□□□□ -1.52
SEC9YGR009C DSF2P38213 736 aa5.53□□□□□ -1.52
SEC9YGR009C RXT2P38255 430 aa5.53□□□□□ -1.52
SEC9YGR009C HSE1P38753 452 aa5.53□□□□□ -1.52
SEC9YGR009C POB3Q04636 552 aaKnown RBP5.53□□□□□ -1.52
SEC9YGR009C ARR1Q06596 294 aa5.53□□□□□ -1.52
SEC9YGR009C BMS1Q08965 1183 aaKnown RBP5.53□□□□□ -1.52
SEC9YGR009C IME2P32581 645 aa5.53□□□□□ -1.52
SEC9YGR009C ATG19P35193 415 aa5.53□□□□□ -1.52
SEC9YGR009C OPY1P38271 328 aa5.53□□□□□ -1.52
SEC9YGR009C APE4P38821 490 aa5.53□□□□□ -1.52
SEC9YGR009C RRP8P38961 392 aaKnown RBP5.53□□□□□ -1.52
SEC9YGR009C MEF2P39677 819 aa5.53□□□□□ -1.52
SEC9YGR009C SWD1P39706 426 aa5.53□□□□□ -1.52
SEC9YGR009C BRR1Q99177 341 aaPredicted RBP5.53□□□□□ -1.52
SEC9YGR009C UBP12P39538 1254 aa5.52□□□□□ -1.53
SEC9YGR009C ARB1P40024 610 aaKnown RBP5.52□□□□□ -1.53
SEC9YGR009C RTT105P40063 208 aa5.52□□□□□ -1.53
SEC9YGR009C ITC1P53125 1264 aa5.52□□□□□ -1.53
SEC9YGR009C BTN2P53286 410 aa5.52□□□□□ -1.53
SEC9YGR009C RNH1Q04740 348 aa5.52□□□□□ -1.53
SEC9YGR009C ARV1Q06541 321 aa5.52□□□□□ -1.53
SEC9YGR009C MPC54Q08550 464 aa5.52□□□□□ -1.53
SEC9YGR009C THR4P16120 514 aaKnown RBP5.51□□□□□ -1.53
SEC9YGR009C TPM1P17536 199 aaKnown RBP5.51□□□□□ -1.53
SEC9YGR009C SMY1P32364 656 aaKnown RBP5.51□□□□□ -1.53
SEC9YGR009C PEP12P32854 288 aa5.51□□□□□ -1.53
SEC9YGR009C VPS29P38759 282 aa5.51□□□□□ -1.53
SEC9YGR009C UTP4Q06679 776 aaKnown RBP5.51□□□□□ -1.53
SEC9YGR009C RKM4Q12504 494 aa5.51□□□□□ -1.53
SEC9YGR009C SWI6P09959 803 aa5.51□□□□□ -1.53
SEC9YGR009C PKC1P24583 1151 aa5.51□□□□□ -1.53
SEC9YGR009C IRR1P40541 1150 aa5.51□□□□□ -1.53
SEC9YGR009C YGR016WP53209 190 aa5.51□□□□□ -1.53
SEC9YGR009C VMS1Q04311 632 aaKnown RBP5.51□□□□□ -1.53
SEC9YGR009C YLH47Q06493 454 aa5.51□□□□□ -1.53
SEC9YGR009C PMT7Q06644 662 aa5.51□□□□□ -1.53
SEC9YGR009C HOM3P10869 527 aa5.5□□□□□ -1.53
SEC9YGR009C MRPL25P23369 157 aa5.5□□□□□ -1.53
SEC9YGR009C AAD3P25612 363 aa5.5□□□□□ -1.53
SEC9YGR009C SPT5P27692 1063 aaKnown RBP5.5□□□□□ -1.53
SEC9YGR009C OXP1P28273 1286 aa5.5□□□□□ -1.53
SEC9YGR009C BIO2P32451 375 aa5.5□□□□□ -1.53
SEC9YGR009C ACP1P32463 125 aa5.5□□□□□ -1.53
SEC9YGR009C ABZ1P37254 787 aaPredicted RBP5.5□□□□□ -1.53
SEC9YGR009C BFR1P38934 470 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53 RIP-Chip
SEC9YGR009C MXR1P40029 184 aa5.5□□□□□ -1.53
SEC9YGR009C RTF1P53064 558 aa5.5□□□□□ -1.53
SEC9YGR009C PAP2P53632 584 aaKnown RBP5.5□□□□□ -1.53
SEC9YGR009C HST2P53686 357 aa5.5□□□□□ -1.53
SEC9YGR009C TAP42Q04372 366 aa5.5□□□□□ -1.53
SEC9YGR009C DBP9Q06218 594 aaKnown RBP5.5□□□□□ -1.53
SEC9YGR009C YPL191CQ08930 360 aa5.5□□□□□ -1.53
SEC9YGR009C RRI2Q12348 645 aa5.5□□□□□ -1.53
SEC9YGR009C RTP1Q12751 981 aa5.5□□□□□ -1.53
SEC9YGR009C MEF1P25039 761 aa5.49□□□□□ -1.53
SEC9YGR009C EFB1P32471 206 aaKnown RBP5.49□□□□□ -1.53
SEC9YGR009C MRE11P32829 692 aa5.49□□□□□ -1.53
SEC9YGR009C MAM1P40065 302 aa5.49□□□□□ -1.53
SEC9YGR009C SMC3P47037 1230 aa5.49□□□□□ -1.53
SEC9YGR009C ACF4P47129 309 aa5.49□□□□□ -1.53
SEC9YGR009C RPL34AP87262 121 aaPredicted RBP5.49□□□□□ -1.53
SEC9YGR009C NDL1Q06568 189 aa5.49□□□□□ -1.53
SEC9YGR009C ISA1Q07821 250 aaPredicted RBP5.49□□□□□ -1.53
SEC9YGR009C HMI1Q12039 706 aa5.49□□□□□ -1.53
SEC9YGR009C SPS1P08458 490 aa5.49□□□□□ -1.53
SEC9YGR009C HMG1P12683 1054 aa5.49□□□□□ -1.53
SEC9YGR009C MER1P16523 270 aa5.49□□□□□ -1.53
SEC9YGR009C HNM1P19807 563 aa5.49□□□□□ -1.53
SEC9YGR009C RPB4P20433 221 aaPredicted RBP5.49□□□□□ -1.53
SEC9YGR009C ACE2P21192 770 aa5.49□□□□□ -1.53
SEC9YGR009C STO1P34160 861 aaKnown RBP5.49□□□□□ -1.53
SEC9YGR009C EFM2P38347 419 aa5.49□□□□□ -1.53
SEC9YGR009C OTU2P38747 307 aaKnown RBP5.49□□□□□ -1.53
SEC9YGR009C CAJ1P39101 391 aa5.49□□□□□ -1.53
SEC9YGR009C YER034WP40022 185 aaKnown RBP5.49□□□□□ -1.53
SEC9YGR009C DOT6P40059 670 aaKnown RBP5.49□□□□□ -1.53
SEC9YGR009C YGR021WP53212 290 aa5.49□□□□□ -1.53
SEC9YGR009C HOL1P53389 586 aa5.49□□□□□ -1.53
SEC9YGR009C MRD1Q06106 887 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms