RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	MET6	P05694	767 aa	Known RBP	4.8	□□□□□ -1.64
SPI1	YER150W	SUP45	P12385	437 aa	Known RBP	4.8	□□□□□ -1.64
SPI1	YER150W	KTR1	P27810	393 aa	Known RBP	4.8	□□□□□ -1.64
SPI1	YER150W	MET1	P36150	593 aa		4.8	□□□□□ -1.64
SPI1	YER150W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SPI1	YER150W	MUM2	P38236	366 aa		4.8	□□□□□ -1.64
SPI1	YER150W	SLI15	P38283	698 aa		4.8	□□□□□ -1.64
SPI1	YER150W	GLO3	P38682	493 aa	Known RBP	4.8	□□□□□ -1.64
SPI1	YER150W	NMD3	P38861	518 aa	Known RBP	4.8	□□□□□ -1.64
SPI1	YER150W	YEN1	P40028	759 aa		4.8	□□□□□ -1.64
SPI1	YER150W	FAF1	P40546	346 aa	Predicted RBP	4.8	□□□□□ -1.64
SPI1	YER150W	MSH4	P40965	878 aa	Predicted RBP	4.8	□□□□□ -1.64
SPI1	YER150W	DPL1	Q05567	589 aa		4.8	□□□□□ -1.64
SPI1	YER150W	WHI5	Q12416	295 aa		4.8	□□□□□ -1.64
SPI1	YER150W	ENO1	P00924	437 aa	Known RBP	4.79	□□□□□ -1.64
SPI1	YER150W	TRL1	P09880	827 aa	Known RBP	4.79	□□□□□ -1.64
SPI1	YER150W	MRC1	P25588	1096 aa		4.79	□□□□□ -1.64
SPI1	YER150W	TFC3	P34111	1160 aa		4.79	□□□□□ -1.64
SPI1	YER150W	MDJ2	P42834	146 aa		4.79	□□□□□ -1.64
SPI1	YER150W	ATG1	P53104	897 aa		4.79	□□□□□ -1.64
SPI1	YER150W	MDM1	Q01846	1127 aa		4.79	□□□□□ -1.64
SPI1	YER150W	CDC53	Q12018	815 aa	Known RBP	4.79	□□□□□ -1.64
SPI1	YER150W	WRS1	Q12109	432 aa	Known RBP	4.79	□□□□□ -1.64
SPI1	YER150W	HSC82	P15108	705 aa	Known RBP	4.78	□□□□□ -1.64
SPI1	YER150W	SWI3	P32591	825 aa		4.78	□□□□□ -1.64
SPI1	YER150W	GRS1	P38088	690 aa	Known RBP	4.78	□□□□□ -1.64
SPI1	YER150W	MAD1	P40957	749 aa		4.78	□□□□□ -1.64
SPI1	YER150W	DAK2	P43550	591 aa		4.78	□□□□□ -1.64
SPI1	YER150W	BDP1	P46678	594 aa		4.78	□□□□□ -1.64
SPI1	YER150W	ATG16	Q03818	150 aa		4.78	□□□□□ -1.64
SPI1	YER150W	MTC5	Q03897	1148 aa		4.78	□□□□□ -1.64
SPI1	YER150W	KAR5	Q04746	504 aa		4.78	□□□□□ -1.64
SPI1	YER150W	MNL2	Q12205	849 aa		4.78	□□□□□ -1.64
SPI1	YER150W	PUS1	Q12211	544 aa	Known RBP	4.78	□□□□□ -1.64
SPI1	YER150W	TRK1	P12685	1235 aa		4.77	□□□□□ -1.65
SPI1	YER150W	PSE1	P32337	1089 aa	Known RBP	4.77	□□□□□ -1.65
SPI1	YER150W	EMP47	P43555	445 aa		4.77	□□□□□ -1.65
SPI1	YER150W	YGR021W	P53212	290 aa		4.77	□□□□□ -1.65
SPI1	YER150W	MRX10	Q05648	414 aa		4.77	□□□□□ -1.65
SPI1	YER150W	IMH1	Q06704	911 aa	Known RBP	4.77	□□□□□ -1.65
SPI1	YER150W	RAM1	P22007	431 aa		4.76	□□□□□ -1.65
SPI1	YER150W	YDJ1	P25491	409 aa	Known RBP	4.76	□□□□□ -1.65
SPI1	YER150W	RAD27	P26793	382 aa		4.76	□□□□□ -1.65
SPI1	YER150W	PAF1	P38351	445 aa		4.76	□□□□□ -1.65
SPI1	YER150W	FOL1	P53848	824 aa		4.76	□□□□□ -1.65
SPI1	YER150W	VPS16	Q03308	798 aa		4.76	□□□□□ -1.65
SPI1	YER150W	SPO20	Q04359	397 aa		4.76	□□□□□ -1.65
SPI1	YER150W	TYW1	Q08960	810 aa	Known RBP	4.76	□□□□□ -1.65
SPI1	YER150W	PIN2	Q12057	282 aa		4.76	□□□□□ -1.65
SPI1	YER150W	CLN2	P20438	545 aa		4.75	□□□□□ -1.65
SPI1	YER150W	AMS1	P22855	1083 aa		4.75	□□□□□ -1.65
SPI1	YER150W	CRP1	P38845	465 aa	Known RBP	4.75	□□□□□ -1.65
SPI1	YER150W	HOS2	P53096	452 aa	Predicted RBP	4.75	□□□□□ -1.65
SPI1	YER150W	PEX8	P53248	589 aa		4.75	□□□□□ -1.65
SPI1	YER150W	PKH1	Q03407	766 aa		4.75	□□□□□ -1.65
SPI1	YER150W	YLR326W	Q06170	240 aa	Known RBP	4.75	□□□□□ -1.65
SPI1	YER150W	BDF2	Q07442	638 aa		4.75	□□□□□ -1.65
SPI1	YER150W	GYP1	Q08484	637 aa		4.75	□□□□□ -1.65
SPI1	YER150W	YOR378W	Q08902	515 aa		4.75	□□□□□ -1.65
SPI1	YER150W	PLP2	Q12017	286 aa		4.75	□□□□□ -1.65
SPI1	YER150W	ENO2	P00925	437 aa	Known RBP	4.74	□□□□□ -1.65
SPI1	YER150W	MTC2	P34246	357 aa		4.74	□□□□□ -1.65
SPI1	YER150W	JNM1	P36224	373 aa		4.74	□□□□□ -1.65
SPI1	YER150W	ECM23	Q02710	187 aa		4.74	□□□□□ -1.65
SPI1	YER150W	GDE1	Q02979	1223 aa		4.74	□□□□□ -1.65
SPI1	YER150W	ESF1	Q06344	628 aa	Known RBP	4.74	□□□□□ -1.65
SPI1	YER150W	ISU2	Q12056	156 aa		4.74	□□□□□ -1.65
SPI1	YER150W	FOB1	O13329	566 aa		4.73	□□□□□ -1.65
SPI1	YER150W	QCR6	P00127	147 aa		4.73	□□□□□ -1.65
SPI1	YER150W	HSP82	P02829	709 aa	Known RBP	4.73	□□□□□ -1.65
SPI1	YER150W	RAD4	P14736	754 aa		4.73	□□□□□ -1.65
SPI1	YER150W	SPT5	P27692	1063 aa	Known RBP	4.73	□□□□□ -1.65
SPI1	YER150W	HSE1	P38753	452 aa		4.73	□□□□□ -1.65
SPI1	YER150W	SNF7	P39929	240 aa	Known RBP	4.73	□□□□□ -1.65
SPI1	YER150W	VID27	P40157	782 aa		4.73	□□□□□ -1.65
SPI1	YER150W	NUP82	P40368	713 aa		4.73	□□□□□ -1.65
SPI1	YER150W	TEA1	P47988	759 aa		4.73	□□□□□ -1.65
SPI1	YER150W	SLX4	Q12098	748 aa		4.73	□□□□□ -1.65
SPI1	YER150W	RAD59	Q12223	238 aa		4.73	□□□□□ -1.65
SPI1	YER150W	VPS5	Q92331	675 aa		4.73	□□□□□ -1.65
SPI1	YER150W	TY1B-A	O13527	1196 aa	Known RBP	4.72	□□□□□ -1.65
SPI1	YER150W	SRM1	P21827	482 aa		4.72	□□□□□ -1.65
SPI1	YER150W	FYV10	P40492	516 aa		4.72	□□□□□ -1.65
SPI1	YER150W	DAS1	P47005	663 aa		4.72	□□□□□ -1.65
SPI1	YER150W	RIM21	P48565	533 aa		4.72	□□□□□ -1.65
SPI1	YER150W	YDR090C	Q03193	310 aa		4.72	□□□□□ -1.65
SPI1	YER150W	RMD1	Q03441	430 aa		4.72	□□□□□ -1.65
SPI1	YER150W	CWC15	Q03772	175 aa	Known RBP	4.72	□□□□□ -1.65
SPI1	YER150W	SXM1	Q04175	944 aa	Known RBP	4.72	□□□□□ -1.65
SPI1	YER150W	INH1	P01097	85 aa		4.71	□□□□□ -1.66
SPI1	YER150W	ATP4	P05626	244 aa		4.71	□□□□□ -1.66
SPI1	YER150W	PEP12	P32854	288 aa		4.71	□□□□□ -1.66
SPI1	YER150W	SAS3	P34218	831 aa		4.71	□□□□□ -1.66
SPI1	YER150W	BOI1	P38041	980 aa	Known RBP	4.71	□□□□□ -1.66
SPI1	YER150W	UBX7	P38349	436 aa		4.71	□□□□□ -1.66
SPI1	YER150W	YAP1801	P38856	637 aa		4.71	□□□□□ -1.66
SPI1	YER150W	YDR341C	Q05506	607 aa	Known RBP	4.71	□□□□□ -1.66
SPI1	YER150W	GRC3	Q07845	632 aa		4.71	□□□□□ -1.66
SPI1	YER150W	HSP42	Q12329	375 aa		4.71	□□□□□ -1.66
SPI1	YER150W	RRI2	Q12348	645 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms