RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W SLX8P40072 274 aa3.76□□□□□ -1.81
LCD1YDR499W RIM21P48565 533 aa3.76□□□□□ -1.81
LCD1YDR499W YMR265CQ03508 461 aaKnown RBP3.76□□□□□ -1.81
LCD1YDR499W UTP13Q05946 817 aaKnown RBP3.76□□□□□ -1.81
LCD1YDR499W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
LCD1YDR499W SUM1P46676 1062 aa3.76□□□□□ -1.81
LCD1YDR499W BIM1P40013 344 aa3.75□□□□□ -1.81
LCD1YDR499W RDS2P19541 446 aaKnown RBP3.75□□□□□ -1.81
LCD1YDR499W ATG32P40458 529 aa3.75□□□□□ -1.81
LCD1YDR499W DIT1P21623 536 aa3.74□□□□□ -1.81
LCD1YDR499W ICP55P40051 511 aa3.74□□□□□ -1.81
LCD1YDR499W JJJ2P46997 583 aa3.74□□□□□ -1.81
LCD1YDR499W KRE33P53914 1056 aaKnown RBP3.74□□□□□ -1.81
LCD1YDR499W NSG2P53898 299 aa3.74□□□□□ -1.81
LCD1YDR499W ADE12P80210 433 aaKnown RBP3.74□□□□□ -1.81
LCD1YDR499W THI72Q08579 599 aa3.74□□□□□ -1.81
LCD1YDR499W PUS1Q12211 544 aaKnown RBP3.74□□□□□ -1.81
LCD1YDR499W ENO1P00924 437 aaKnown RBP3.73□□□□□ -1.81
LCD1YDR499W TIF1P10081 395 aaKnown RBP3.73□□□□□ -1.81
LCD1YDR499W IRE1P32361 1115 aa3.73□□□□□ -1.81
LCD1YDR499W SHM1P37292 490 aaPredicted RBP3.73□□□□□ -1.81
LCD1YDR499W AIM9P40053 627 aaKnown RBP3.73□□□□□ -1.81
LCD1YDR499W SWI5P08153 709 aa3.72□□□□□ -1.81
LCD1YDR499W RTG2P32608 588 aaKnown RBP3.72□□□□□ -1.81
LCD1YDR499W RPL34BP40525 121 aaKnown RBP3.72□□□□□ -1.81
LCD1YDR499W SYT1Q06836 1226 aa3.72□□□□□ -1.81
LCD1YDR499W AI1P03875 834 aa3.71□□□□□ -1.82
LCD1YDR499W MRX10Q05648 414 aa3.71□□□□□ -1.82
LCD1YDR499W PHM7Q12252 991 aa3.71□□□□□ -1.82
LCD1YDR499W RPS6AP0CX37 236 aaKnown RBP3.71□□□□□ -1.82
LCD1YDR499W RPS6BP0CX38 236 aaPredicted RBP3.71□□□□□ -1.82
LCD1YDR499W PDI1P17967 522 aaKnown RBP3.7□□□□□ -1.82
LCD1YDR499W HGH1P48362 394 aaKnown RBP3.7□□□□□ -1.82
LCD1YDR499W PSH1Q12161 406 aa3.7□□□□□ -1.82
LCD1YDR499W YDR461C-AQ2V2P7 80 aa3.7□□□□□ -1.82
LCD1YDR499W PDC6P26263 563 aaKnown RBP3.7□□□□□ -1.82
LCD1YDR499W NTH2P35172 780 aa3.7□□□□□ -1.82
LCD1YDR499W MRPL16P38064 232 aa3.7□□□□□ -1.82
LCD1YDR499W KTR7P40504 517 aa3.7□□□□□ -1.82
LCD1YDR499W LSB3P43603 459 aaKnown RBP3.7□□□□□ -1.82
LCD1YDR499W YFL066CP43538 392 aa3.69□□□□□ -1.82
LCD1YDR499W YPQ2Q06328 317 aa3.69□□□□□ -1.82
LCD1YDR499W STB3Q12427 513 aa3.69□□□□□ -1.82
LCD1YDR499W FPS1P23900 669 aa3.68□□□□□ -1.82
LCD1YDR499W SBE2P42223 864 aaKnown RBP3.68□□□□□ -1.82
LCD1YDR499W YFL034WP43564 1073 aa3.68□□□□□ -1.82
LCD1YDR499W RPS31P05759 152 aaKnown RBP3.68□□□□□ -1.82
LCD1YDR499W YNL165WP53891 406 aa3.67□□□□□ -1.82
LCD1YDR499W TSC13Q99190 310 aa3.67□□□□□ -1.82
LCD1YDR499W PEP12P32854 288 aa3.66□□□□□ -1.82
LCD1YDR499W YNR014WP53719 212 aa3.66□□□□□ -1.82
LCD1YDR499W TDA6Q06466 467 aa3.66□□□□□ -1.82
LCD1YDR499W GPM1P00950 247 aaKnown RBP3.65□□□□□ -1.83
LCD1YDR499W CYT1P07143 309 aa3.65□□□□□ -1.83
LCD1YDR499W MLF3P32047 452 aa3.65□□□□□ -1.83
LCD1YDR499W YTA6P40328 754 aa3.65□□□□□ -1.83
LCD1YDR499W YPR053CQ6Q5F3 151 aa3.65□□□□□ -1.83
LCD1YDR499W Q0182Q9ZZW1 134 aa3.65□□□□□ -1.83
LCD1YDR499W SPR3P41901 512 aa3.64□□□□□ -1.83
LCD1YDR499W ALD2P47771 506 aa3.64□□□□□ -1.83
LCD1YDR499W ACS2P52910 683 aaKnown RBP3.64□□□□□ -1.83
LCD1YDR499W MCM1P11746 286 aa3.64□□□□□ -1.83
LCD1YDR499W LEU1P07264 779 aaKnown RBP3.63□□□□□ -1.83
LCD1YDR499W YMR187CQ03236 431 aa3.63□□□□□ -1.83
LCD1YDR499W RGP1P16664 663 aa3.62□□□□□ -1.83
LCD1YDR499W PHO87P25360 923 aa3.62□□□□□ -1.83
LCD1YDR499W LEO1P38439 464 aa3.62□□□□□ -1.83
LCD1YDR499W BOI2P39969 1040 aa3.62□□□□□ -1.83
LCD1YDR499W CCT8P47079 568 aaKnown RBP3.62□□□□□ -1.83
LCD1YDR499W TY1A-DR2Q03964 440 aaKnown RBP3.62□□□□□ -1.83
LCD1YDR499W PDC5P16467 563 aaKnown RBP3.61□□□□□ -1.83
LCD1YDR499W MTO1P53070 669 aa3.61□□□□□ -1.83
LCD1YDR499W HAP4P14064 554 aa3.6□□□□□ -1.83
LCD1YDR499W DMA2P53924 522 aa3.6□□□□□ -1.83
LCD1YDR499W KNS1P32350 737 aaPredicted RBP3.6□□□□□ -1.83
LCD1YDR499W MSC7P38694 644 aa3.6□□□□□ -1.83
LCD1YDR499W GAS4Q08271 471 aa3.6□□□□□ -1.83
LCD1YDR499W MCX1P38323 520 aaPredicted RBP3.59□□□□□ -1.83
LCD1YDR499W SKN7P38889 622 aa3.59□□□□□ -1.83
LCD1YDR499W ROM1P53046 1155 aa3.59□□□□□ -1.83
LCD1YDR499W GAL2P13181 574 aa3.59□□□□□ -1.84
LCD1YDR499W MET1P36150 593 aa3.59□□□□□ -1.84
LCD1YDR499W YCK2P23292 546 aaKnown RBP3.58□□□□□ -1.84
LCD1YDR499W SLN1P39928 1220 aaPredicted RBP3.58□□□□□ -1.84
LCD1YDR499W ECM23Q02710 187 aa3.58□□□□□ -1.84
LCD1YDR499W RPP1AP05318 106 aaPredicted RBP3.58□□□□□ -1.84
LCD1YDR499W SBP1P10080 294 aaKnown RBP3.58□□□□□ -1.84
LCD1YDR499W UBP1P25037 809 aa3.58□□□□□ -1.84
LCD1YDR499W SIS2P36024 562 aa3.58□□□□□ -1.84
LCD1YDR499W TGL4P36165 910 aa3.58□□□□□ -1.84
LCD1YDR499W YDR215CQ12240 137 aa3.58□□□□□ -1.84
LCD1YDR499W HXT5P38695 592 aa3.57□□□□□ -1.84
LCD1YDR499W NGR1P32831 672 aaKnown RBP3.56□□□□□ -1.84
LCD1YDR499W SCD5P34758 872 aa3.56□□□□□ -1.84
LCD1YDR499W TTI1P36097 1038 aa3.56□□□□□ -1.84
LCD1YDR499W CUS1Q02554 436 aaPredicted RBP3.56□□□□□ -1.84
LCD1YDR499W MCA1Q08601 432 aa3.56□□□□□ -1.84
LCD1YDR499W VAN1P23642 535 aa3.56□□□□□ -1.84
LCD1YDR499W KAP122P32767 1081 aa3.56□□□□□ -1.84
LCD1YDR499W PRY1P47032 299 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms