RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W TIM50Q02776 476 aa8.21□□□□□ -1.09
NUP84YDL116W SES1P07284 462 aaKnown RBP8.21□□□□□ -1.1
NUP84YDL116W BDH2P39713 417 aa8.21□□□□□ -1.1
NUP84YDL116W AAD16Q02895 342 aa8.21□□□□□ -1.1
NUP84YDL116W RNR2P09938 399 aaKnown RBP8.2□□□□□ -1.1
NUP84YDL116W RAD4P14736 754 aa8.2□□□□□ -1.1
NUP84YDL116W MBR1P23493 339 aa8.2□□□□□ -1.1
NUP84YDL116W ECM16Q04217 1267 aaKnown RBP8.2□□□□□ -1.1
NUP84YDL116W PGA3Q12746 312 aaKnown RBP8.2□□□□□ -1.1
NUP84YDL116W RPS19AP07280 144 aaKnown RBP8.19□□□□□ -1.1
NUP84YDL116W RPS19BP07281 144 aaPredicted RBP8.19□□□□□ -1.1
NUP84YDL116W RAD26P40352 1085 aa8.19□□□□□ -1.1
NUP84YDL116W PBS2P08018 668 aa8.18□□□□□ -1.1
NUP84YDL116W FRS2P15625 503 aaKnown RBP8.18□□□□□ -1.1
NUP84YDL116W AI2P03876 854 aa8.18□□□□□ -1.1
NUP84YDL116W MRP7P12687 371 aa8.18□□□□□ -1.1
NUP84YDL116W HXT10P43581 546 aa8.18□□□□□ -1.1
NUP84YDL116W HST1P53685 503 aa8.18□□□□□ -1.1
NUP84YDL116W PEX19Q07418 342 aa8.18□□□□□ -1.1
NUP84YDL116W GLC3P32775 704 aa8.17□□□□□ -1.1
NUP84YDL116W FPR4Q06205 392 aaPredicted RBP8.17□□□□□ -1.1
NUP84YDL116W ALE1Q08548 619 aa8.17□□□□□ -1.1
NUP84YDL116W MAM1P40065 302 aa8.17□□□□□ -1.1
NUP84YDL116W CTF18P49956 741 aa8.17□□□□□ -1.1
NUP84YDL116W KRE33P53914 1056 aaKnown RBP8.17□□□□□ -1.1
NUP84YDL116W ADE6P38972 1358 aaKnown RBP8.16□□□□□ -1.1
NUP84YDL116W NUP133P36161 1157 aa8.16□□□□□ -1.1
NUP84YDL116W BOI2P39969 1040 aa8.16□□□□□ -1.1
NUP84YDL116W TPM2P40414 161 aa8.16□□□□□ -1.1
NUP84YDL116W RIM20Q12033 661 aa8.16□□□□□ -1.1
NUP84YDL116W CYC8P14922 966 aa8.15□□□□□ -1.1
NUP84YDL116W VID28P40547 921 aa8.15□□□□□ -1.1
NUP84YDL116W PIB2P53191 635 aa8.15□□□□□ -1.1
NUP84YDL116W MAK10Q02197 733 aa8.15□□□□□ -1.1
NUP84YDL116W AOS1Q06624 347 aa8.15□□□□□ -1.1
NUP84YDL116W CDC16P09798 840 aa8.15□□□□□ -1.11
NUP84YDL116W AIM7Q12156 149 aa8.15□□□□□ -1.11
NUP84YDL116W YRF1-2P40105 1681 aa8.14□□□□□ -1.11
NUP84YDL116W KEX1P09620 729 aa8.14□□□□□ -1.11
NUP84YDL116W FYV10P40492 516 aa8.14□□□□□ -1.11
NUP84YDL116W RSM25P40496 264 aa8.14□□□□□ -1.11
NUP84YDL116W OSW7P43611 510 aa8.14□□□□□ -1.11
NUP84YDL116W SGD1Q06132 899 aa8.14□□□□□ -1.11
NUP84YDL116W ESC2Q06340 456 aa8.14□□□□□ -1.11
NUP84YDL116W VPS64Q03944 604 aa8.14□□□□□ -1.11
NUP84YDL116W URB1P34241 1764 aaKnown RBP8.14□□□□□ -1.11
NUP84YDL116W PDR18P53756 1333 aa8.13□□□□□ -1.11
NUP84YDL116W GCD7P32502 381 aaPredicted RBP8.13□□□□□ -1.11
NUP84YDL116W MRPL10P36520 322 aa8.13□□□□□ -1.11
NUP84YDL116W AAP1P37898 856 aaKnown RBP8.13□□□□□ -1.11
NUP84YDL116W KTR3P38130 404 aaPredicted RBP8.13□□□□□ -1.11
NUP84YDL116W GUA1P38625 525 aaKnown RBP8.13□□□□□ -1.11
NUP84YDL116W MRPS35P53292 345 aa8.13□□□□□ -1.11
NUP84YDL116W RPL19AP0CX82 189 aaKnown RBP8.12□□□□□ -1.11
NUP84YDL116W RPL19BP0CX83 189 aaPredicted RBP8.12□□□□□ -1.11
NUP84YDL116W PRX1P34227 261 aaKnown RBP8.12□□□□□ -1.11
NUP84YDL116W PRP43P53131 767 aaKnown RBP8.12□□□□□ -1.11
NUP84YDL116W LYS2P07702 1392 aa8.12□□□□□ -1.11
NUP84YDL116W SIS2P36024 562 aa8.12□□□□□ -1.11
NUP84YDL116W NPR3P38742 1146 aa8.12□□□□□ -1.11
NUP84YDL116W PIL1P53252 339 aaKnown RBP8.12□□□□□ -1.11
NUP84YDL116W HOS3Q02959 697 aaKnown RBP8.12□□□□□ -1.11
NUP84YDL116W YOL057WQ08225 711 aa8.12□□□□□ -1.11
NUP84YDL116W HOP09932 586 aa8.11□□□□□ -1.11
NUP84YDL116W SRC1Q03707 834 aa8.11□□□□□ -1.11
NUP84YDL116W AIM9P40053 627 aaKnown RBP8.11□□□□□ -1.11
NUP84YDL116W SLX8P40072 274 aa8.11□□□□□ -1.11
NUP84YDL116W YGL082WP53155 381 aa8.11□□□□□ -1.11
NUP84YDL116W SFI1Q12369 946 aa8.11□□□□□ -1.11
NUP84YDL116W CPA2P03965 1118 aaKnown RBP8.1□□□□□ -1.11
NUP84YDL116W CLB5P30283 435 aa8.1□□□□□ -1.11
NUP84YDL116W MIF2P35201 549 aa8.1□□□□□ -1.11
NUP84YDL116W ECM21P38167 1117 aaKnown RBP8.1□□□□□ -1.11
NUP84YDL116W UTP13Q05946 817 aaKnown RBP8.1□□□□□ -1.11
NUP84YDL116W RCR1P38212 213 aa8.1□□□□□ -1.11
NUP84YDL116W CCT5P40413 562 aaKnown RBP8.1□□□□□ -1.11
NUP84YDL116W ARP5P53946 755 aa8.1□□□□□ -1.11
NUP84YDL116W FAP1P53971 965 aa8.1□□□□□ -1.11
NUP84YDL116W ALO1P54783 526 aaKnown RBP8.1□□□□□ -1.11
NUP84YDL116W FKS3Q04952 1785 aa8.09□□□□□ -1.11
NUP84YDL116W ATE1P16639 503 aa8.09□□□□□ -1.11
NUP84YDL116W RDS1P25611 832 aa8.09□□□□□ -1.11
NUP84YDL116W BBC1P47068 1157 aa8.09□□□□□ -1.11
NUP84YDL116W MSB3P48566 633 aaPredicted RBP8.09□□□□□ -1.11
NUP84YDL116W APL2P36000 726 aaPredicted RBP8.08□□□□□ -1.12
NUP84YDL116W YGR130CP53278 816 aa8.08□□□□□ -1.12
NUP84YDL116W NSE3Q05541 303 aa8.08□□□□□ -1.12
NUP84YDL116W LPD1P09624 499 aaKnown RBP8.08□□□□□ -1.12
NUP84YDL116W CIC1P38779 376 aaKnown RBP8.08□□□□□ -1.12
NUP84YDL116W PRP31P49704 494 aaPredicted RBP8.08□□□□□ -1.12
NUP84YDL116W YDR306CQ06640 478 aa8.08□□□□□ -1.12
NUP84YDL116W MSB4Q12317 492 aa8.08□□□□□ -1.12
NUP84YDL116W KCC4P25389 1037 aa8.07□□□□□ -1.12
NUP84YDL116W GPA1P08539 472 aa8.07□□□□□ -1.12
NUP84YDL116W SSA1P10591 642 aaKnown RBP8.07□□□□□ -1.12
NUP84YDL116W PRP45P28004 379 aaPredicted RBP8.07□□□□□ -1.12
NUP84YDL116W NOC2P39744 710 aaKnown RBP8.07□□□□□ -1.12
NUP84YDL116W YER130CP39959 443 aa8.07□□□□□ -1.12
NUP84YDL116W FCP1Q03254 732 aa8.07□□□□□ -1.12
NUP84YDL116W MAM3Q12296 706 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 96.9 ms