RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	ISF1	P32488	338 aa		5.63	□□□□□ -1.51
HMRA2	YCR096C	AMN1	P38285	549 aa	Predicted RBP	5.63	□□□□□ -1.51
HMRA2	YCR096C	EMP47	P43555	445 aa		5.63	□□□□□ -1.51
HMRA2	YCR096C	MCA1	Q08601	432 aa		5.63	□□□□□ -1.51
HMRA2	YCR096C	FPS1	P23900	669 aa		5.62	□□□□□ -1.51
HMRA2	YCR096C	HAL5	P38970	855 aa	Known RBP	5.62	□□□□□ -1.51
HMRA2	YCR096C	JJJ2	P46997	583 aa		5.61	□□□□□ -1.51
HMRA2	YCR096C	SSA2	P10592	639 aa	Known RBP	5.6	□□□□□ -1.51
HMRA2	YCR096C	IRE1	P32361	1115 aa		5.6	□□□□□ -1.51
HMRA2	YCR096C	SHM1	P37292	490 aa	Predicted RBP	5.6	□□□□□ -1.51
HMRA2	YCR096C	ALA1	P40825	983 aa	Known RBP	5.6	□□□□□ -1.51
HMRA2	YCR096C	SUM1	P46676	1062 aa		5.6	□□□□□ -1.51
HMRA2	YCR096C	TBS1	P38114	1094 aa		5.59	□□□□□ -1.51
HMRA2	YCR096C	LSB6	P42951	607 aa		5.59	□□□□□ -1.51
HMRA2	YCR096C	MRX12	P47084	519 aa		5.59	□□□□□ -1.51
HMRA2	YCR096C	MRPL16	P38064	232 aa		5.58	□□□□□ -1.52
HMRA2	YCR096C	MCM16	Q12262	181 aa		5.58	□□□□□ -1.52
HMRA2	YCR096C	PSH1	Q12161	406 aa		5.57	□□□□□ -1.52
HMRA2	YCR096C	PDC5	P16467	563 aa	Known RBP	5.56	□□□□□ -1.52
HMRA2	YCR096C	MET1	P36150	593 aa		5.56	□□□□□ -1.52
HMRA2	YCR096C	PDC6	P26263	563 aa	Known RBP	5.55	□□□□□ -1.52
HMRA2	YCR096C	KNS1	P32350	737 aa	Predicted RBP	5.55	□□□□□ -1.52
HMRA2	YCR096C	TAT1	P38085	619 aa		5.55	□□□□□ -1.52
HMRA2	YCR096C	SLX8	P40072	274 aa		5.55	□□□□□ -1.52
HMRA2	YCR096C	PRY1	P47032	299 aa		5.55	□□□□□ -1.52
HMRA2	YCR096C	CSE4	P36012	229 aa		5.54	□□□□□ -1.52
HMRA2	YCR096C	STB3	Q12427	513 aa		5.54	□□□□□ -1.52
HMRA2	YCR096C	YDJ1	P25491	409 aa	Known RBP	5.53	□□□□□ -1.52
HMRA2	YCR096C	SPR3	P41901	512 aa		5.53	□□□□□ -1.52
HMRA2	YCR096C	TY1A-DR2	Q03964	440 aa	Known RBP	5.53	□□□□□ -1.52
HMRA2	YCR096C	RPS31	P05759	152 aa	Known RBP	5.52	□□□□□ -1.53
HMRA2	YCR096C	MAC1	P35192	417 aa		5.52	□□□□□ -1.53
HMRA2	YCR096C	HDA3	Q06623	655 aa		5.52	□□□□□ -1.53
HMRA2	YCR096C	KIN1	P13185	1064 aa		5.51	□□□□□ -1.53
HMRA2	YCR096C	SOH1	P38633	127 aa		5.51	□□□□□ -1.53
HMRA2	YCR096C	SPT5	P27692	1063 aa	Known RBP	5.49	□□□□□ -1.53
HMRA2	YCR096C	YPL034W	Q03083	165 aa		5.49	□□□□□ -1.53
HMRA2	YCR096C	MSC7	P38694	644 aa		5.48	□□□□□ -1.53
HMRA2	YCR096C	ALO1	P54783	526 aa	Known RBP	5.48	□□□□□ -1.53
HMRA2	YCR096C	GUA1	P38625	525 aa	Known RBP	5.47	□□□□□ -1.53
HMRA2	YCR096C	UTP13	Q05946	817 aa	Known RBP	5.47	□□□□□ -1.53
HMRA2	YCR096C	YPQ2	Q06328	317 aa		5.47	□□□□□ -1.53
HMRA2	YCR096C	LEU1	P07264	779 aa	Known RBP	5.46	□□□□□ -1.54
HMRA2	YCR096C	YBL036C	P38197	257 aa		5.45	□□□□□ -1.54
HMRA2	YCR096C	ALD2	P47771	506 aa		5.45	□□□□□ -1.54
HMRA2	YCR096C	HPC2	Q01448	625 aa		5.45	□□□□□ -1.54
HMRA2	YCR096C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
HMRA2	YCR096C	SWI5	P08153	709 aa		5.43	□□□□□ -1.54
HMRA2	YCR096C	ATG3	P40344	310 aa		5.43	□□□□□ -1.54
HMRA2	YCR096C	INP52	P50942	1183 aa		5.43	□□□□□ -1.54
HMRA2	YCR096C	YNL165W	P53891	406 aa		5.43	□□□□□ -1.54
HMRA2	YCR096C	OMA1	P36163	345 aa		5.42	□□□□□ -1.54
HMRA2	YCR096C	RGP1	P16664	663 aa		5.41	□□□□□ -1.54
HMRA2	YCR096C	TPS3	P38426	1054 aa	Known RBP	5.41	□□□□□ -1.54
HMRA2	YCR096C	BUD9	P53226	547 aa		5.41	□□□□□ -1.54
HMRA2	YCR096C	IRC24	P40580	263 aa		5.4	□□□□□ -1.54
HMRA2	YCR096C	TFB3	Q03290	321 aa		5.4	□□□□□ -1.54
HMRA2	YCR096C	PGM2	P37012	569 aa	Known RBP	5.39	□□□□□ -1.55
HMRA2	YCR096C	AIM9	P40053	627 aa	Known RBP	5.38	□□□□□ -1.55
HMRA2	YCR096C	YPP1	P46951	817 aa		5.38	□□□□□ -1.55
HMRA2	YCR096C	NHA1	Q99271	985 aa		5.38	□□□□□ -1.55
HMRA2	YCR096C	SUP45	P12385	437 aa	Known RBP	5.37	□□□□□ -1.55
HMRA2	YCR096C	BIO2	P32451	375 aa		5.37	□□□□□ -1.55
HMRA2	YCR096C	ALG14	P38242	237 aa		5.37	□□□□□ -1.55
HMRA2	YCR096C	ENO2	P00925	437 aa	Known RBP	5.36	□□□□□ -1.55
HMRA2	YCR096C	RPP1A	P05318	106 aa	Predicted RBP	5.36	□□□□□ -1.55
HMRA2	YCR096C	RPS6A	P0CX37	236 aa	Known RBP	5.36	□□□□□ -1.55
HMRA2	YCR096C	RPS6B	P0CX38	236 aa	Predicted RBP	5.36	□□□□□ -1.55
HMRA2	YCR096C	MLF3	P32047	452 aa		5.36	□□□□□ -1.55
HMRA2	YCR096C	PKC1	P24583	1151 aa		5.35	□□□□□ -1.55
HMRA2	YCR096C	YTA6	P40328	754 aa		5.35	□□□□□ -1.55
HMRA2	YCR096C	PRK1	P40494	810 aa		5.35	□□□□□ -1.55
HMRA2	YCR096C	MCM1	P11746	286 aa		5.34	□□□□□ -1.55
HMRA2	YCR096C	RDS2	P19541	446 aa	Known RBP	5.34	□□□□□ -1.55
HMRA2	YCR096C	NAR1	P23503	491 aa	Known RBP	5.34	□□□□□ -1.55
HMRA2	YCR096C	YNL108C	P53929	270 aa		5.34	□□□□□ -1.55
HMRA2	YCR096C	GAS5	Q08193	484 aa		5.34	□□□□□ -1.55
HMRA2	YCR096C	NTH2	P35172	780 aa		5.33	□□□□□ -1.56
HMRA2	YCR096C	HEH2	Q03281	663 aa		5.33	□□□□□ -1.56
HMRA2	YCR096C	Q0182	Q9ZZW1	134 aa		5.33	□□□□□ -1.56
HMRA2	YCR096C	AI3	P03877	415 aa		5.32	□□□□□ -1.56
HMRA2	YCR096C	PGM1	P33401	570 aa	Known RBP	5.32	□□□□□ -1.56
HMRA2	YCR096C	BRL1	P38770	471 aa		5.32	□□□□□ -1.56
HMRA2	YCR096C	RIM21	P48565	533 aa		5.31	□□□□□ -1.56
HMRA2	YCR096C	GIS4	Q04233	774 aa		5.31	□□□□□ -1.56
HMRA2	YCR096C	AVT1	P47082	602 aa		5.3	□□□□□ -1.56
HMRA2	YCR096C	YFL034W	P43564	1073 aa		5.29	□□□□□ -1.56
HMRA2	YCR096C	SAC7	P17121	654 aa		5.28	□□□□□ -1.56
HMRA2	YCR096C	RRM3	P38766	723 aa		5.28	□□□□□ -1.56
HMRA2	YCR096C	MTO1	P53070	669 aa		5.28	□□□□□ -1.56
HMRA2	YCR096C	PDI1	P17967	522 aa	Known RBP	5.27	□□□□□ -1.57
HMRA2	YCR096C	SKP1	P52286	194 aa		5.27	□□□□□ -1.57
HMRA2	YCR096C	TRP3	P00937	484 aa		5.26	□□□□□ -1.57
HMRA2	YCR096C	YKR073C	P36153	106 aa		5.26	□□□□□ -1.57
HMRA2	YCR096C	ARI1	P53111	347 aa	Known RBP	5.26	□□□□□ -1.57
HMRA2	YCR096C	NCL1	P38205	684 aa	Known RBP	5.25	□□□□□ -1.57
HMRA2	YCR096C	YNR040W	P53736	256 aa		5.25	□□□□□ -1.57
HMRA2	YCR096C	CUS1	Q02554	436 aa	Predicted RBP	5.24	□□□□□ -1.57
HMRA2	YCR096C	MED7	Q08278	222 aa		5.24	□□□□□ -1.57
HMRA2	YCR096C	MRP10	O75012	95 aa		5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms