RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ABCC5O15440 1437 aa15.48■□□□□ 0.07
PHGDH-212ENST00000641247 NOS1P29475 1434 aa15.48■□□□□ 0.07
PHGDH-212ENST00000641247 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
PHGDH-212ENST00000641247 ERBINQ96RT1 1412 aa15.46■□□□□ 0.07
PHGDH-212ENST00000641247 AFF2P51816 1311 aa15.44■□□□□ 0.06
PHGDH-212ENST00000641247 ZFYVE9O95405 1425 aa15.44■□□□□ 0.06
PHGDH-212ENST00000641247 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-212ENST00000641247 BRINP3Q76B58 766 aa15.44■□□□□ 0.06
PHGDH-212ENST00000641247 TBX22Q9Y458 520 aa15.44■□□□□ 0.06
PHGDH-212ENST00000641247 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
PHGDH-212ENST00000641247 LMTK2Q8IWU2 1503 aa15.43■□□□□ 0.06
PHGDH-212ENST00000641247 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
PHGDH-212ENST00000641247 SLC52A1Q9NWF4 448 aa15.43■□□□□ 0.06
PHGDH-212ENST00000641247 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-212ENST00000641247 KANK1Q14678 1352 aa15.42■□□□□ 0.06
PHGDH-212ENST00000641247 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
PHGDH-212ENST00000641247 CHIC2Q9UKJ5 165 aa15.42■□□□□ 0.06
PHGDH-212ENST00000641247 AHDC1Q5TGY3 1603 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-212ENST00000641247 ADGRB3O60242 1522 aa15.42■□□□□ 0.06
PHGDH-212ENST00000641247 RGS12O14924 1447 aa15.42■□□□□ 0.06
PHGDH-212ENST00000641247 NCOA3Q9Y6Q9 1424 aa15.42■□□□□ 0.06
PHGDH-212ENST00000641247 KDM5AP29375 1690 aaKnown RBP15.41■□□□□ 0.06
PHGDH-212ENST00000641247 DIP2AQ14689 1571 aa15.41■□□□□ 0.06
PHGDH-212ENST00000641247 CADPS2Q86UW7 1296 aa15.41■□□□□ 0.06
PHGDH-212ENST00000641247 QTRT2Q9H974 415 aaKnown RBP15.41■□□□□ 0.06
PHGDH-212ENST00000641247 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
PHGDH-212ENST00000641247 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
PHGDH-212ENST00000641247 ATF3P18847 181 aa15.4■□□□□ 0.06
PHGDH-212ENST00000641247 DDX17Q92841 729 aaKnown RBP15.39■□□□□ 0.05
PHGDH-212ENST00000641247 CHD2O14647 1828 aaKnown RBP15.38■□□□□ 0.05
PHGDH-212ENST00000641247 PPP1R15AO75807 674 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-212ENST00000641247 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
PHGDH-212ENST00000641247 DAPK1P53355 1430 aa15.37■□□□□ 0.05
PHGDH-212ENST00000641247 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
PHGDH-212ENST00000641247 RBM6P78332 1123 aaKnown RBP15.37■□□□□ 0.05
PHGDH-212ENST00000641247 C8orf37Q96NL8 207 aa15.37■□□□□ 0.05
PHGDH-212ENST00000641247 SRCAPQ6ZRS2 3230 aa15.37■□□□□ 0.05
PHGDH-212ENST00000641247 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
PHGDH-212ENST00000641247 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-212ENST00000641247 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
PHGDH-212ENST00000641247 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
PHGDH-212ENST00000641247 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
PHGDH-212ENST00000641247 HDGFP51858 240 aaKnown RBP15.33■□□□□ 0.04
PHGDH-212ENST00000641247 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
PHGDH-212ENST00000641247 ADAMTS2O95450 1211 aa15.31■□□□□ 0.04
PHGDH-212ENST00000641247 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
PHGDH-212ENST00000641247 ANKRD30AQ9BXX3 1397 aa15.31■□□□□ 0.04
PHGDH-212ENST00000641247 MST1RQ04912 1400 aa15.31■□□□□ 0.04
PHGDH-212ENST00000641247 TMEM131LA2VDJ0 1609 aa15.31■□□□□ 0.04
PHGDH-212ENST00000641247 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
PHGDH-212ENST00000641247 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
PHGDH-212ENST00000641247 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
PHGDH-212ENST00000641247 PIK3R4Q99570 1358 aa15.3■□□□□ 0.04
PHGDH-212ENST00000641247 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
PHGDH-212ENST00000641247 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
PHGDH-212ENST00000641247 CROCC2H7BZ55 1655 aa15.28■□□□□ 0.04
PHGDH-212ENST00000641247 PTPN23Q9H3S7 1636 aa15.28■□□□□ 0.04
PHGDH-212ENST00000641247 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
PHGDH-212ENST00000641247 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.03
PHGDH-212ENST00000641247 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
PHGDH-212ENST00000641247 ATAD2Q6PL18 1390 aa15.25■□□□□ 0.03
PHGDH-212ENST00000641247 USP21Q9UK80 565 aa15.25■□□□□ 0.03
PHGDH-212ENST00000641247 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
PHGDH-212ENST00000641247 DCCP43146 1447 aa15.24■□□□□ 0.03
PHGDH-212ENST00000641247 FNBP4Q8N3X1 1017 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-212ENST00000641247 METP08581 1390 aa15.23■□□□□ 0.03
PHGDH-212ENST00000641247 NHSL1Q5SYE7 1610 aa15.22■□□□□ 0.03
PHGDH-212ENST00000641247 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
PHGDH-212ENST00000641247 TRPM2O94759 1503 aa15.22■□□□□ 0.03
PHGDH-212ENST00000641247 ORAI2Q96SN7 254 aa15.21■□□□□ 0.03
PHGDH-212ENST00000641247 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-212ENST00000641247 ADGRL2O95490 1459 aa15.2■□□□□ 0.02
PHGDH-212ENST00000641247 SOS2Q07890 1332 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-212ENST00000641247 ATRNO75882 1429 aa15.19■□□□□ 0.02
PHGDH-212ENST00000641247 UNC13BO14795 1591 aa15.18■□□□□ 0.02
PHGDH-212ENST00000641247 C1orf167Q5SNV9 1468 aa15.17■□□□□ 0.02
PHGDH-212ENST00000641247 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
PHGDH-212ENST00000641247 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
PHGDH-212ENST00000641247 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
PHGDH-212ENST00000641247 BCL9LQ86UU0 1499 aa15.15■□□□□ 0.02
PHGDH-212ENST00000641247 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
PHGDH-212ENST00000641247 CCDC125Q86Z20 511 aa15.15■□□□□ 0.02
PHGDH-212ENST00000641247 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
PHGDH-212ENST00000641247 E9PCH4 1651 aa15.13■□□□□ 0.01
PHGDH-212ENST00000641247 PTCH1Q13635 1447 aa15.12■□□□□ 0.01
PHGDH-212ENST00000641247 FOXD1Q16676 465 aa15.12■□□□□ 0.01
PHGDH-212ENST00000641247 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-212ENST00000641247 APLP2Q06481 763 aa15.09■□□□□ 0.01
PHGDH-212ENST00000641247 ZNF326Q5BKZ1 582 aaKnown RBP15.09■□□□□ 0.01
PHGDH-212ENST00000641247 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
PHGDH-212ENST00000641247 MYOM2P54296 1465 aa15.08■□□□□ 0.01
PHGDH-212ENST00000641247 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
PHGDH-212ENST00000641247 NALCNQ8IZF0 1738 aa15.08■□□□□ 0
PHGDH-212ENST00000641247 NUP155O75694 1391 aa15.08■□□□□ 0
PHGDH-212ENST00000641247 LAMC1P11047 1609 aa15.07■□□□□ 0
PHGDH-212ENST00000641247 BLMP54132 1417 aaPredicted RBP15.06■□□□□ 0
PHGDH-212ENST00000641247 EP400Q96L91 3159 aa15.04■□□□□ -0
PHGDH-212ENST00000641247 PSDA5PKW4 1024 aaPredicted RBP15.04■□□□□ -0
PHGDH-212ENST00000641247 UNC5CLQ8IV45 518 aa15.04■□□□□ -0
PHGDH-212ENST00000641247 RALGAPBQ86X10 1494 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms