RNA–Protein interactions for RNA: ENST00000640094.1

HLA-B-257, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 147 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-257ENST00000640094 NOS1P29475 1434 aa13.68□□□□□ -0.22
HLA-B-257ENST00000640094 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
HLA-B-257ENST00000640094 ABCC5O15440 1437 aa13.67□□□□□ -0.22
HLA-B-257ENST00000640094 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
HLA-B-257ENST00000640094 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
HLA-B-257ENST00000640094 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
HLA-B-257ENST00000640094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.22
HLA-B-257ENST00000640094 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
HLA-B-257ENST00000640094 CDK12Q9NYV4 1490 aaPredicted RBP13.66□□□□□ -0.22
HLA-B-257ENST00000640094 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
HLA-B-257ENST00000640094 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
HLA-B-257ENST00000640094 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
HLA-B-257ENST00000640094 ZNF772Q68DY9 489 aaPredicted RBP13.65□□□□□ -0.22
HLA-B-257ENST00000640094 SLAIN2Q9P270 581 aa13.65□□□□□ -0.22
HLA-B-257ENST00000640094 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
HLA-B-257ENST00000640094 BCANQ96GW7 911 aa13.64□□□□□ -0.23
HLA-B-257ENST00000640094 IDI1Q13907 227 aa13.63□□□□□ -0.23
HLA-B-257ENST00000640094 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
HLA-B-257ENST00000640094 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
HLA-B-257ENST00000640094 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
HLA-B-257ENST00000640094 SLC52A1Q9NWF4 448 aa13.62□□□□□ -0.23
HLA-B-257ENST00000640094 TRPM2O94759 1503 aa13.62□□□□□ -0.23
HLA-B-257ENST00000640094 ADGRL2O95490 1459 aa13.61□□□□□ -0.23
HLA-B-257ENST00000640094 NHSL1Q5SYE7 1610 aa13.61□□□□□ -0.23
HLA-B-257ENST00000640094 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
HLA-B-257ENST00000640094 UNC13BO14795 1591 aa13.6□□□□□ -0.23
HLA-B-257ENST00000640094 DCCP43146 1447 aa13.59□□□□□ -0.23
HLA-B-257ENST00000640094 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
HLA-B-257ENST00000640094 C14orf37Q86TY3 774 aa13.59□□□□□ -0.23
HLA-B-257ENST00000640094 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
HLA-B-257ENST00000640094 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
HLA-B-257ENST00000640094 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
HLA-B-257ENST00000640094 PIK3R4Q99570 1358 aa13.58□□□□□ -0.23
HLA-B-257ENST00000640094 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
HLA-B-257ENST00000640094 ASXL1Q8IXJ9 1541 aa13.58□□□□□ -0.24
HLA-B-257ENST00000640094 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-257ENST00000640094 E9PCH4 1651 aa13.56□□□□□ -0.24
HLA-B-257ENST00000640094 ATF3P18847 181 aa13.56□□□□□ -0.24
HLA-B-257ENST00000640094 IQGAP3Q86VI3 1631 aa13.56□□□□□ -0.24
HLA-B-257ENST00000640094 RXRBP28702 533 aa13.55□□□□□ -0.24
HLA-B-257ENST00000640094 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-B-257ENST00000640094 ADAMTS13Q76LX8 1427 aa13.54□□□□□ -0.24
HLA-B-257ENST00000640094 ANKRD50Q9ULJ7 1429 aa13.54□□□□□ -0.24
HLA-B-257ENST00000640094 C19orf44Q9H6X5 657 aa13.53□□□□□ -0.24
HLA-B-257ENST00000640094 TBX22Q9Y458 520 aa13.53□□□□□ -0.24
HLA-B-257ENST00000640094 APLP2Q06481 763 aa13.52□□□□□ -0.25
HLA-B-257ENST00000640094 RGS12O14924 1447 aa13.52□□□□□ -0.25
HLA-B-257ENST00000640094 SETD5Q9C0A6 1442 aa13.52□□□□□ -0.25
HLA-B-257ENST00000640094 NALCNQ8IZF0 1738 aa13.52□□□□□ -0.25
HLA-B-257ENST00000640094 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
HLA-B-257ENST00000640094 SETBP1Q9Y6X0 1596 aa13.51□□□□□ -0.25
HLA-B-257ENST00000640094 AFF2P51816 1311 aa13.5□□□□□ -0.25
HLA-B-257ENST00000640094 CHIC2Q9UKJ5 165 aa13.5□□□□□ -0.25
HLA-B-257ENST00000640094 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
HLA-B-257ENST00000640094 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
HLA-B-257ENST00000640094 LAMC1P11047 1609 aa13.49□□□□□ -0.25
HLA-B-257ENST00000640094 MST1RQ04912 1400 aa13.48□□□□□ -0.25
HLA-B-257ENST00000640094 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
HLA-B-257ENST00000640094 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
HLA-B-257ENST00000640094 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
HLA-B-257ENST00000640094 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
HLA-B-257ENST00000640094 CHGAP10645 457 aaKnown RBP13.46□□□□□ -0.25
HLA-B-257ENST00000640094 FOXD1Q16676 465 aa13.46□□□□□ -0.25
HLA-B-257ENST00000640094 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
HLA-B-257ENST00000640094 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
HLA-B-257ENST00000640094 PTPRUQ92729 1446 aa13.45□□□□□ -0.26
HLA-B-257ENST00000640094 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
HLA-B-257ENST00000640094 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
HLA-B-257ENST00000640094 COL22A1Q8NFW1 1626 aaPredicted RBP13.43□□□□□ -0.26
HLA-B-257ENST00000640094 LRRC59Q96AG4 307 aaKnown RBP13.43□□□□□ -0.26
HLA-B-257ENST00000640094 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
HLA-B-257ENST00000640094 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
HLA-B-257ENST00000640094 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
HLA-B-257ENST00000640094 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
HLA-B-257ENST00000640094 KIF1BO60333 1816 aa13.41□□□□□ -0.26
HLA-B-257ENST00000640094 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
HLA-B-257ENST00000640094 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
HLA-B-257ENST00000640094 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
HLA-B-257ENST00000640094 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
HLA-B-257ENST00000640094 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
HLA-B-257ENST00000640094 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
HLA-B-257ENST00000640094 C1orf167Q5SNV9 1468 aa13.36□□□□□ -0.27
HLA-B-257ENST00000640094 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
HLA-B-257ENST00000640094 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
HLA-B-257ENST00000640094 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
HLA-B-257ENST00000640094 EP400Q96L91 3159 aa13.34□□□□□ -0.27
HLA-B-257ENST00000640094 CDC42BPGQ6DT37 1551 aa13.34□□□□□ -0.27
HLA-B-257ENST00000640094 ATRNO75882 1429 aa13.34□□□□□ -0.27
HLA-B-257ENST00000640094 PRAG1Q86YV5 1406 aa13.34□□□□□ -0.27
HLA-B-257ENST00000640094 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
HLA-B-257ENST00000640094 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
HLA-B-257ENST00000640094 LRP5O75197 1615 aa13.34□□□□□ -0.27
HLA-B-257ENST00000640094 NUP155O75694 1391 aa13.33□□□□□ -0.27
HLA-B-257ENST00000640094 METP08581 1390 aa13.33□□□□□ -0.27
HLA-B-257ENST00000640094 USP21Q9UK80 565 aa13.33□□□□□ -0.28
HLA-B-257ENST00000640094 MYOM2P54296 1465 aa13.32□□□□□ -0.28
HLA-B-257ENST00000640094 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
HLA-B-257ENST00000640094 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
HLA-B-257ENST00000640094 CCDC125Q86Z20 511 aa13.31□□□□□ -0.28
HLA-B-257ENST00000640094 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms