RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 PLEKHD1A6NEE1 506 aa13.7□□□□□ -0.22
SPIN3-230ENST00000639888 TMF1P82094 1093 aa13.7□□□□□ -0.22
SPIN3-230ENST00000639888 BRD4O60885 1362 aaPredicted RBP13.7□□□□□ -0.22
SPIN3-230ENST00000639888 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
SPIN3-230ENST00000639888 ADAMTS8Q9UP79 889 aa13.69□□□□□ -0.22
SPIN3-230ENST00000639888 GOLGA6L6A8MZA4 724 aa13.69□□□□□ -0.22
SPIN3-230ENST00000639888 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
SPIN3-230ENST00000639888 APBB1O00213 710 aa13.68□□□□□ -0.22
SPIN3-230ENST00000639888 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-230ENST00000639888 PANK3Q9H999 370 aa13.68□□□□□ -0.22
SPIN3-230ENST00000639888 TNPO1Q92973 898 aaKnown RBP13.68□□□□□ -0.22
SPIN3-230ENST00000639888 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
SPIN3-230ENST00000639888 UACAQ9BZF9 1416 aa13.68□□□□□ -0.22
SPIN3-230ENST00000639888 LETM1O95202 739 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-230ENST00000639888 SEC24BO95487 1268 aa13.67□□□□□ -0.22
SPIN3-230ENST00000639888 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
SPIN3-230ENST00000639888 PHF14O94880 888 aa13.67□□□□□ -0.22
SPIN3-230ENST00000639888 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
SPIN3-230ENST00000639888 NCOA2Q15596 1464 aa13.66□□□□□ -0.22
SPIN3-230ENST00000639888 GOLGA6L4A6NEF3 574 aa13.65□□□□□ -0.22
SPIN3-230ENST00000639888 NUCB2P80303 420 aa13.65□□□□□ -0.22
SPIN3-230ENST00000639888 GTPBP4Q9BZE4 634 aaKnown RBP13.65□□□□□ -0.22
SPIN3-230ENST00000639888 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
SPIN3-230ENST00000639888 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
SPIN3-230ENST00000639888 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
SPIN3-230ENST00000639888 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
SPIN3-230ENST00000639888 MAPKBP1O60336 1514 aa13.65□□□□□ -0.22
SPIN3-230ENST00000639888 LNPKQ9C0E8 428 aa13.64□□□□□ -0.23
SPIN3-230ENST00000639888 SMC4Q9NTJ3 1288 aa13.64□□□□□ -0.23
SPIN3-230ENST00000639888 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 KIF20AO95235 890 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 NPHP1O15259 732 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 ST18O60284 1047 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 ANKRD45Q5TZF3 282 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
SPIN3-230ENST00000639888 CDCA8Q53HL2 280 aa13.62□□□□□ -0.23
SPIN3-230ENST00000639888 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
SPIN3-230ENST00000639888 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
SPIN3-230ENST00000639888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPIN3-230ENST00000639888 SYCE3A1L190 88 aa13.61□□□□□ -0.23
SPIN3-230ENST00000639888 HTATSF1O43719 755 aaKnown RBP13.61□□□□□ -0.23
SPIN3-230ENST00000639888 IGHDP01880 384 aa13.61□□□□□ -0.23
SPIN3-230ENST00000639888 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
SPIN3-230ENST00000639888 ZRSR1Q15695 479 aaKnown RBP13.61□□□□□ -0.23
SPIN3-230ENST00000639888 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
SPIN3-230ENST00000639888 HFM1A2PYH4 1435 aa13.6□□□□□ -0.23
SPIN3-230ENST00000639888 SSFA2P28290 1259 aa13.6□□□□□ -0.23
SPIN3-230ENST00000639888 TSC1Q92574 1164 aa13.6□□□□□ -0.23
SPIN3-230ENST00000639888 NRDCO43847 1150 aa13.6□□□□□ -0.23
SPIN3-230ENST00000639888 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
SPIN3-230ENST00000639888 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
SPIN3-230ENST00000639888 ZKSCAN5Q9Y2L8 839 aa13.59□□□□□ -0.23
SPIN3-230ENST00000639888 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
SPIN3-230ENST00000639888 SPC24Q8NBT2 197 aa13.59□□□□□ -0.23
SPIN3-230ENST00000639888 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
SPIN3-230ENST00000639888 TSPY26PQ9H489 355 aa13.59□□□□□ -0.23
SPIN3-230ENST00000639888 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.23
SPIN3-230ENST00000639888 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
SPIN3-230ENST00000639888 GOLGA6L1Q8N7Z2 621 aa13.58□□□□□ -0.24
SPIN3-230ENST00000639888 NBPF1Q3BBV0 1214 aa13.57□□□□□ -0.24
SPIN3-230ENST00000639888 TIGD1Q96MW7 591 aa13.57□□□□□ -0.24
SPIN3-230ENST00000639888 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
SPIN3-230ENST00000639888 K7ELQ4 463 aaPredicted RBP13.56□□□□□ -0.24
SPIN3-230ENST00000639888 DMTNQ08495 405 aa13.56□□□□□ -0.24
SPIN3-230ENST00000639888 ZKSCAN2Q63HK3 967 aa13.56□□□□□ -0.24
SPIN3-230ENST00000639888 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
SPIN3-230ENST00000639888 NAIPQ13075 1403 aa13.56□□□□□ -0.24
SPIN3-230ENST00000639888 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
SPIN3-230ENST00000639888 GAS2L3Q86XJ1 694 aa13.56□□□□□ -0.24
SPIN3-230ENST00000639888 IPO4Q8TEX9 1081 aaKnown RBP13.56□□□□□ -0.24
SPIN3-230ENST00000639888 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
SPIN3-230ENST00000639888 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 MCM5P33992 734 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 TERF1P54274 439 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 MCCP23508 829 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
SPIN3-230ENST00000639888 CALCOCO1Q9P1Z2 691 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 NCOA1Q15788 1441 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 GPS2Q13227 327 aa13.55□□□□□ -0.24
SPIN3-230ENST00000639888 EIF3AQ14152 1382 aaKnown RBP13.54□□□□□ -0.24
SPIN3-230ENST00000639888 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
SPIN3-230ENST00000639888 RIPK4P57078 832 aa13.54□□□□□ -0.24
SPIN3-230ENST00000639888 MBD3O95983 291 aa13.54□□□□□ -0.24
SPIN3-230ENST00000639888 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
SPIN3-230ENST00000639888 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
SPIN3-230ENST00000639888 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
SPIN3-230ENST00000639888 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
SPIN3-230ENST00000639888 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
SPIN3-230ENST00000639888 NOL7Q9UMY1 257 aaKnown RBP13.53□□□□□ -0.24
SPIN3-230ENST00000639888 TRIM6-TRIM34B2RNG4 842 aa13.53□□□□□ -0.24
SPIN3-230ENST00000639888 U2AF1L5P0DN76 240 aaPredicted RBP13.53□□□□□ -0.24
SPIN3-230ENST00000639888 U2AF1Q01081 240 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPIN3-230ENST00000639888 CCDC112Q8NEF3 446 aa13.53□□□□□ -0.24
SPIN3-230ENST00000639888 TRIM34Q9BYJ4 488 aa13.53□□□□□ -0.24
SPIN3-230ENST00000639888 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.24
SPIN3-230ENST00000639888 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
SPIN3-230ENST00000639888 CERS3Q8IU89 383 aa13.52□□□□□ -0.25
SPIN3-230ENST00000639888 NUP155O75694 1391 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms