RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-229ENST00000639809 ROCK1Q13464 1354 aa24.36■■□□□ 1.49
SPIN3-229ENST00000639809 PLEKHG1Q9ULL1 1385 aa24.36■■□□□ 1.49
SPIN3-229ENST00000639809 ZFYVE9O95405 1425 aa24.35■■□□□ 1.49
SPIN3-229ENST00000639809 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
SPIN3-229ENST00000639809 UNC13BO14795 1591 aa24.34■■□□□ 1.49
SPIN3-229ENST00000639809 BCANQ96GW7 911 aa24.34■■□□□ 1.49
SPIN3-229ENST00000639809 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
SPIN3-229ENST00000639809 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.33■■□□□ 1.49
SPIN3-229ENST00000639809 RIMS2Q9UQ26 1411 aa24.32■■□□□ 1.48
SPIN3-229ENST00000639809 MSH6P52701 1360 aa24.31■■□□□ 1.48
SPIN3-229ENST00000639809 PPP1R15AO75807 674 aaPredicted RBP24.31■■□□□ 1.48
SPIN3-229ENST00000639809 TMEM131LA2VDJ0 1609 aa24.31■■□□□ 1.48
SPIN3-229ENST00000639809 NCOA3Q9Y6Q9 1424 aa24.29■■□□□ 1.48
SPIN3-229ENST00000639809 TBX22Q9Y458 520 aa24.29■■□□□ 1.48
SPIN3-229ENST00000639809 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
SPIN3-229ENST00000639809 IQGAP3Q86VI3 1631 aa24.25■■□□□ 1.47
SPIN3-229ENST00000639809 CHD2O14647 1828 aaKnown RBP24.25■■□□□ 1.47
SPIN3-229ENST00000639809 MYO5BQ9ULV0 1848 aa24.24■■□□□ 1.47
SPIN3-229ENST00000639809 PIK3R4Q99570 1358 aa24.24■■□□□ 1.47
SPIN3-229ENST00000639809 DIP2AQ14689 1571 aa24.24■■□□□ 1.47
SPIN3-229ENST00000639809 SLAIN2Q9P270 581 aa24.23■■□□□ 1.47
SPIN3-229ENST00000639809 E9PCH4 1651 aa24.23■■□□□ 1.47
SPIN3-229ENST00000639809 RBM33Q96EV2 1170 aaKnown RBP24.22■■□□□ 1.47
SPIN3-229ENST00000639809 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
SPIN3-229ENST00000639809 RGS17Q9UGC6 210 aaPredicted RBP24.21■■□□□ 1.47
SPIN3-229ENST00000639809 NUP155O75694 1391 aa24.2■■□□□ 1.46
SPIN3-229ENST00000639809 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
SPIN3-229ENST00000639809 JCADQ9P266 1359 aa24.15■■□□□ 1.46
SPIN3-229ENST00000639809 CADPS2Q86UW7 1296 aa24.14■■□□□ 1.45
SPIN3-229ENST00000639809 C19orf44Q9H6X5 657 aa24.13■■□□□ 1.45
SPIN3-229ENST00000639809 TRPM2O94759 1503 aa24.13■■□□□ 1.45
SPIN3-229ENST00000639809 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
SPIN3-229ENST00000639809 C14orf37Q86TY3 774 aa24.12■■□□□ 1.45
SPIN3-229ENST00000639809 ATF3P18847 181 aa24.1■■□□□ 1.45
SPIN3-229ENST00000639809 ITGAEP38570 1179 aa24.08■■□□□ 1.45
SPIN3-229ENST00000639809 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
SPIN3-229ENST00000639809 POTEAQ6S8J7 498 aa24.07■■□□□ 1.44
SPIN3-229ENST00000639809 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
SPIN3-229ENST00000639809 AMOTL2Q9Y2J4 779 aa24.06■■□□□ 1.44
SPIN3-229ENST00000639809 DCCP43146 1447 aa24.06■■□□□ 1.44
SPIN3-229ENST00000639809 COL16A1Q07092 1604 aaPredicted RBP24.06■■□□□ 1.44
SPIN3-229ENST00000639809 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.05■■□□□ 1.44
SPIN3-229ENST00000639809 SETBP1Q9Y6X0 1596 aa24.05■■□□□ 1.44
SPIN3-229ENST00000639809 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
SPIN3-229ENST00000639809 AHDC1Q5TGY3 1603 aaPredicted RBP24.04■■□□□ 1.44
SPIN3-229ENST00000639809 PTPRUQ92729 1446 aa24.02■■□□□ 1.44
SPIN3-229ENST00000639809 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
SPIN3-229ENST00000639809 NRXN3Q9Y4C0 1643 aa23.99■■□□□ 1.43
SPIN3-229ENST00000639809 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
SPIN3-229ENST00000639809 RRBP1Q9P2E9 1410 aaKnown RBP23.98■■□□□ 1.43
SPIN3-229ENST00000639809 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
SPIN3-229ENST00000639809 SHPRHQ149N8 1683 aa23.95■■□□□ 1.43
SPIN3-229ENST00000639809 ZNF772Q68DY9 489 aaPredicted RBP23.95■■□□□ 1.42
SPIN3-229ENST00000639809 MEX3CQ5U5Q3 659 aaKnown RBP23.94■■□□□ 1.42
SPIN3-229ENST00000639809 NAIPQ13075 1403 aa23.93■■□□□ 1.42
SPIN3-229ENST00000639809 METP08581 1390 aa23.92■■□□□ 1.42
SPIN3-229ENST00000639809 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
SPIN3-229ENST00000639809 NEXMIFQ5QGS0 1516 aa23.92■■□□□ 1.42
SPIN3-229ENST00000639809 LRP6O75581 1613 aa23.92■■□□□ 1.42
SPIN3-229ENST00000639809 CLTCL1P53675 1640 aa23.91■■□□□ 1.42
SPIN3-229ENST00000639809 ASXL1Q8IXJ9 1541 aa23.9■■□□□ 1.42
SPIN3-229ENST00000639809 MST1RQ04912 1400 aa23.9■■□□□ 1.42
SPIN3-229ENST00000639809 SETD5Q9C0A6 1442 aa23.9■■□□□ 1.42
SPIN3-229ENST00000639809 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
SPIN3-229ENST00000639809 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
SPIN3-229ENST00000639809 KIF1BO60333 1816 aa23.88■■□□□ 1.41
SPIN3-229ENST00000639809 LRRC59Q96AG4 307 aaKnown RBP23.86■■□□□ 1.41
SPIN3-229ENST00000639809 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
SPIN3-229ENST00000639809 HFM1A2PYH4 1435 aa23.85■■□□□ 1.41
SPIN3-229ENST00000639809 NHSL1Q5SYE7 1610 aa23.84■■□□□ 1.41
SPIN3-229ENST00000639809 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
SPIN3-229ENST00000639809 PRAG1Q86YV5 1406 aa23.83■■□□□ 1.4
SPIN3-229ENST00000639809 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
SPIN3-229ENST00000639809 RXRBP28702 533 aa23.79■■□□□ 1.4
SPIN3-229ENST00000639809 CDK12Q9NYV4 1490 aaPredicted RBP23.79■■□□□ 1.4
SPIN3-229ENST00000639809 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
SPIN3-229ENST00000639809 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
SPIN3-229ENST00000639809 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
SPIN3-229ENST00000639809 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
SPIN3-229ENST00000639809 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
SPIN3-229ENST00000639809 SETD1AO15047 1707 aaKnown RBP23.78■■□□□ 1.4
SPIN3-229ENST00000639809 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
SPIN3-229ENST00000639809 PNPLA6Q8IY17 1366 aa23.75■■□□□ 1.39
SPIN3-229ENST00000639809 AFF2P51816 1311 aa23.74■■□□□ 1.39
SPIN3-229ENST00000639809 LAMC1P11047 1609 aa23.73■■□□□ 1.39
SPIN3-229ENST00000639809 ROBO2Q9HCK4 1378 aa23.73■■□□□ 1.39
SPIN3-229ENST00000639809 UPF1Q92900 1129 aaKnown RBP eCLIP23.71■■□□□ 1.39
SPIN3-229ENST00000639809 PPLO60437 1756 aa23.7■■□□□ 1.38
SPIN3-229ENST00000639809 SOS2Q07890 1332 aaPredicted RBP23.69■■□□□ 1.38
SPIN3-229ENST00000639809 DDX17Q92841 729 aaKnown RBP23.68■■□□□ 1.38
SPIN3-229ENST00000639809 C8orf37Q96NL8 207 aa23.67■■□□□ 1.38
SPIN3-229ENST00000639809 ACIN1Q9UKV3 1341 aaKnown RBP23.66■■□□□ 1.38
SPIN3-229ENST00000639809 CCDC144AA2RUR9 1427 aa23.66■■□□□ 1.38
SPIN3-229ENST00000639809 RBM6P78332 1123 aaKnown RBP23.65■■□□□ 1.38
SPIN3-229ENST00000639809 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
SPIN3-229ENST00000639809 ORAI2Q96SN7 254 aa23.64■■□□□ 1.37
SPIN3-229ENST00000639809 QTRT2Q9H974 415 aaKnown RBP23.64■■□□□ 1.37
SPIN3-229ENST00000639809 CDC42BPGQ6DT37 1551 aa23.63■■□□□ 1.37
SPIN3-229ENST00000639809 NGLY1Q96IV0 654 aa23.62■■□□□ 1.37
SPIN3-229ENST00000639809 NPHP3Q7Z494 1330 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms