RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	ARHGEF11	O15085	1522 aa		13.81	□□□□□ -0.2
PAX6-256	ENST00000639394	RRBP1	Q9P2E9	1410 aa	Known RBP	13.81	□□□□□ -0.2
PAX6-256	ENST00000639394	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.81	□□□□□ -0.2
PAX6-256	ENST00000639394	EFCC1	Q9HA90	598 aa		13.81	□□□□□ -0.2
PAX6-256	ENST00000639394	NCOA2	Q15596	1464 aa		13.81	□□□□□ -0.2
PAX6-256	ENST00000639394	TRO	Q12816	1431 aa	Predicted RBP	13.8	□□□□□ -0.2
PAX6-256	ENST00000639394	ADCY10	Q96PN6	1610 aa		13.78	□□□□□ -0.2
PAX6-256	ENST00000639394	KDM5B	Q9UGL1	1544 aa		13.78	□□□□□ -0.2
PAX6-256	ENST00000639394	IRX5	P78411	483 aa	Predicted RBP	13.78	□□□□□ -0.2
PAX6-256	ENST00000639394	CERS3	Q8IU89	383 aa		13.78	□□□□□ -0.2
PAX6-256	ENST00000639394	PRDM16	Q9HAZ2	1276 aa		13.78	□□□□□ -0.2
PAX6-256	ENST00000639394	FSD2	A1L4K1	749 aa		13.77	□□□□□ -0.21
PAX6-256	ENST00000639394		E9PSI1	815 aa		13.77	□□□□□ -0.21
PAX6-256	ENST00000639394	FAM13B	Q9NYF5	915 aa		13.77	□□□□□ -0.21
PAX6-256	ENST00000639394	ANP32C	O43423	234 aa		13.76	□□□□□ -0.21
PAX6-256	ENST00000639394	CCNB3	Q8WWL7	1395 aa		13.76	□□□□□ -0.21
PAX6-256	ENST00000639394	ZBED9	Q6R2W3	1325 aa		13.76	□□□□□ -0.21
PAX6-256	ENST00000639394	PLEKHD1	A6NEE1	506 aa		13.76	□□□□□ -0.21
PAX6-256	ENST00000639394	MRE11	P49959	708 aa		13.76	□□□□□ -0.21
PAX6-256	ENST00000639394	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.75	□□□□□ -0.21
PAX6-256	ENST00000639394	LMOD3	Q0VAK6	560 aa		13.75	□□□□□ -0.21
PAX6-256	ENST00000639394	RAI14	Q9P0K7	980 aa		13.75	□□□□□ -0.21
PAX6-256	ENST00000639394	MYOM3	Q5VTT5	1437 aa		13.75	□□□□□ -0.21
PAX6-256	ENST00000639394	NBPF9	Q3BBW0	867 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	BACH2	Q9BYV9	841 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	CCDC66	A2RUB6	948 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	XRCC6	P12956	609 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	SH3BP1	Q9Y3L3	701 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	RIMBP3C	A6NJZ7	1639 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	RIMBP3B	A6NNM3	1639 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	RIMBP3	Q9UFD9	1639 aa		13.74	□□□□□ -0.21
PAX6-256	ENST00000639394	SATB1	Q01826	763 aa		13.73	□□□□□ -0.21
PAX6-256	ENST00000639394	BANK1	Q8NDB2	785 aa		13.73	□□□□□ -0.21
PAX6-256	ENST00000639394	FGD6	Q6ZV73	1430 aa		13.73	□□□□□ -0.21
PAX6-256	ENST00000639394	KIF14	Q15058	1648 aa		13.73	□□□□□ -0.21
PAX6-256	ENST00000639394	PDE4A	P27815	886 aa		13.72	□□□□□ -0.21
PAX6-256	ENST00000639394	NGEF	Q8N5V2	710 aa		13.72	□□□□□ -0.21
PAX6-256	ENST00000639394	RBM28	Q9NW13	759 aa	Known RBP	13.72	□□□□□ -0.21
PAX6-256	ENST00000639394	MYH16	Q9H6N6	1097 aa		13.72	□□□□□ -0.21
PAX6-256	ENST00000639394	FRAT2	O75474	233 aa	Predicted RBP	13.71	□□□□□ -0.21
PAX6-256	ENST00000639394	CGN	Q9P2M7	1197 aa	Known RBP	13.71	□□□□□ -0.21
PAX6-256	ENST00000639394	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
PAX6-256	ENST00000639394	ABCC10	Q5T3U5	1492 aa		13.7	□□□□□ -0.22
PAX6-256	ENST00000639394	CASC1	Q6TDU7	716 aa		13.7	□□□□□ -0.22
PAX6-256	ENST00000639394	BSDC1	Q9NW68	430 aa	Predicted RBP	13.7	□□□□□ -0.22
PAX6-256	ENST00000639394	SSR1	P43307	286 aa	Known RBP	13.69	□□□□□ -0.22
PAX6-256	ENST00000639394	MIA2	Q96PC5	1412 aa		13.69	□□□□□ -0.22
PAX6-256	ENST00000639394	CTR9	Q6PD62	1173 aa		13.68	□□□□□ -0.22
PAX6-256	ENST00000639394	MAP2K1	Q02750	393 aa	Predicted RBP	13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	AEBP1	Q8IUX7	1158 aa		13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	KIF3A	Q9Y496	699 aa		13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	TCOF1	Q13428	1488 aa	Known RBP	13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	MYCBP	Q99417	103 aa	Predicted RBP	13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	CEP83	Q9Y592	693 aa		13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	PTPN23	Q9H3S7	1636 aa		13.67	□□□□□ -0.22
PAX6-256	ENST00000639394	FAM50A	Q14320	339 aa	Known RBP	13.66	□□□□□ -0.22
PAX6-256	ENST00000639394	TIGD1	Q96MW7	591 aa		13.65	□□□□□ -0.22
PAX6-256	ENST00000639394	TERF2IP	Q9NYB0	399 aa		13.65	□□□□□ -0.22
PAX6-256	ENST00000639394	ITSN2	Q9NZM3	1697 aa		13.65	□□□□□ -0.22
PAX6-256	ENST00000639394	WDR7	Q9Y4E6	1490 aa		13.65	□□□□□ -0.22
PAX6-256	ENST00000639394	CSPP1	Q1MSJ5	1256 aa		13.65	□□□□□ -0.22
PAX6-256	ENST00000639394	NBPF10	Q6P3W6	841 aa	Known RBP	13.65	□□□□□ -0.22
PAX6-256	ENST00000639394	NINL	Q9Y2I6	1382 aa		13.64	□□□□□ -0.23
PAX6-256	ENST00000639394	TULP2	O00295	520 aa		13.64	□□□□□ -0.23
PAX6-256	ENST00000639394	KCNJ4	P48050	445 aa		13.64	□□□□□ -0.23
PAX6-256	ENST00000639394	CYB5RL	Q6IPT4	315 aa		13.64	□□□□□ -0.23
PAX6-256	ENST00000639394	OTUD6B	Q8N6M0	293 aa		13.64	□□□□□ -0.23
PAX6-256	ENST00000639394	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
PAX6-256	ENST00000639394	GOLIM4	O00461	696 aa		13.63	□□□□□ -0.23
PAX6-256	ENST00000639394	PPP1R15A	O75807	674 aa	Predicted RBP	13.63	□□□□□ -0.23
PAX6-256	ENST00000639394	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PAX6-256	ENST00000639394	CDC42BPA	Q5VT25	1732 aa		13.63	□□□□□ -0.23
PAX6-256	ENST00000639394	ASXL2	Q76L83	1435 aa		13.63	□□□□□ -0.23
PAX6-256	ENST00000639394	TTC37	Q6PGP7	1564 aa		13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	SEMA3F	Q13275	785 aa		13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	ZSCAN30	Q86W11	494 aa		13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	NBPF6	Q5VWK0	638 aa		13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	ZNF526	Q8TF50	670 aa	Predicted RBP	13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	NBPF4	Q96M43	638 aa		13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	POGK	Q9P215	609 aa		13.62	□□□□□ -0.23
PAX6-256	ENST00000639394	UQCRHL	A0A096LP55	91 aa		13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	ZNF500	O60304	480 aa	Predicted RBP	13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	UQCRH	P07919	91 aa		13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	CALR	P27797	417 aa	Known RBP	13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	MFAP1	P55081	439 aa	Known RBP	13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	TMC1	Q8TDI8	760 aa		13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.61	□□□□□ -0.23
PAX6-256	ENST00000639394	CCDC172	P0C7W6	258 aa		13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	BRPF1	P55201	1214 aa	Predicted RBP	13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	NCAPG	Q9BPX3	1015 aa		13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	CALCOCO1	Q9P1Z2	691 aa		13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	PREX2	Q70Z35	1606 aa		13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	RNF123	Q5XPI4	1314 aa		13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	GABPB1	Q06547	395 aa	Predicted RBP	13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	HS1BP3	Q53T59	392 aa		13.6	□□□□□ -0.23
PAX6-256	ENST00000639394	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms