RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
KCNMA1-229ENST00000638249 TRPM2O94759 1503 aa22.41■■□□□ 1.18
KCNMA1-229ENST00000638249 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
KCNMA1-229ENST00000638249 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
KCNMA1-229ENST00000638249 PLEKHG1Q9ULL1 1385 aa22.39■■□□□ 1.17
KCNMA1-229ENST00000638249 CHGAP10645 457 aaKnown RBP22.38■■□□□ 1.17
KCNMA1-229ENST00000638249 CHD2O14647 1828 aaKnown RBP22.35■■□□□ 1.17
KCNMA1-229ENST00000638249 NUTM2DQ5VT03 806 aaPredicted RBP22.35■■□□□ 1.17
KCNMA1-229ENST00000638249 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
KCNMA1-229ENST00000638249 PIP4K2BP78356 416 aa22.34■■□□□ 1.17
KCNMA1-229ENST00000638249 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
KCNMA1-229ENST00000638249 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
KCNMA1-229ENST00000638249 TOM1O60784 492 aa22.32■■□□□ 1.16
KCNMA1-229ENST00000638249 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
KCNMA1-229ENST00000638249 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
KCNMA1-229ENST00000638249 DIP2AQ14689 1571 aa22.31■■□□□ 1.16
KCNMA1-229ENST00000638249 NEXMIFQ5QGS0 1516 aa22.3■■□□□ 1.16
KCNMA1-229ENST00000638249 TMEM94Q12767 1356 aa22.3■■□□□ 1.16
KCNMA1-229ENST00000638249 KCNA6P17658 529 aa22.3■■□□□ 1.16
KCNMA1-229ENST00000638249 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
KCNMA1-229ENST00000638249 KIF1BO60333 1816 aa22.29■■□□□ 1.16
KCNMA1-229ENST00000638249 BCANQ96GW7 911 aa22.28■■□□□ 1.16
KCNMA1-229ENST00000638249 HSPA1LP34931 641 aa22.27■■□□□ 1.16
KCNMA1-229ENST00000638249 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.27■■□□□ 1.16
KCNMA1-229ENST00000638249 RBM33Q96EV2 1170 aaKnown RBP22.27■■□□□ 1.16
KCNMA1-229ENST00000638249 SETBP1Q9Y6X0 1596 aa22.26■■□□□ 1.15
KCNMA1-229ENST00000638249 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
KCNMA1-229ENST00000638249 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
KCNMA1-229ENST00000638249 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
KCNMA1-229ENST00000638249 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
KCNMA1-229ENST00000638249 FOXD1Q16676 465 aa22.22■■□□□ 1.15
KCNMA1-229ENST00000638249 XRN1Q8IZH2 1706 aaKnown RBP22.21■■□□□ 1.15
KCNMA1-229ENST00000638249 PROSER2Q86WR7 435 aaPredicted RBP22.21■■□□□ 1.15
KCNMA1-229ENST00000638249 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
KCNMA1-229ENST00000638249 ZNF326Q5BKZ1 582 aaKnown RBP22.19■■□□□ 1.14
KCNMA1-229ENST00000638249 SETD1AO15047 1707 aaKnown RBP22.19■■□□□ 1.14
KCNMA1-229ENST00000638249 PPLO60437 1756 aa22.18■■□□□ 1.14
KCNMA1-229ENST00000638249 PIK3R4Q99570 1358 aa22.18■■□□□ 1.14
KCNMA1-229ENST00000638249 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
KCNMA1-229ENST00000638249 SETD5Q9C0A6 1442 aa22.16■■□□□ 1.14
KCNMA1-229ENST00000638249 MED1Q15648 1581 aaPredicted RBP22.16■■□□□ 1.14
KCNMA1-229ENST00000638249 METP08581 1390 aa22.14■■□□□ 1.13
KCNMA1-229ENST00000638249 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.13■■□□□ 1.13
KCNMA1-229ENST00000638249 MPHOSPH9Q99550 1183 aa22.12■■□□□ 1.13
KCNMA1-229ENST00000638249 IFT172Q9UG01 1749 aa22.12■■□□□ 1.13
KCNMA1-229ENST00000638249 MSH6P52701 1360 aa22.12■■□□□ 1.13
KCNMA1-229ENST00000638249 FAM135BQ49AJ0 1406 aa22.12■■□□□ 1.13
KCNMA1-229ENST00000638249 RAB3GAP2Q9H2M9 1393 aa22.11■■□□□ 1.13
KCNMA1-229ENST00000638249 ILDR2Q71H61 639 aa22.1■■□□□ 1.13
KCNMA1-229ENST00000638249 AMOTL2Q9Y2J4 779 aa22.1■■□□□ 1.13
KCNMA1-229ENST00000638249 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
KCNMA1-229ENST00000638249 SPATA31E1Q6ZUB1 1445 aa22.09■■□□□ 1.13
KCNMA1-229ENST00000638249 NCOA3Q9Y6Q9 1424 aa22.09■■□□□ 1.13
KCNMA1-229ENST00000638249 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
KCNMA1-229ENST00000638249 RPGRIP1LQ68CZ1 1315 aa22.02■■□□□ 1.12
KCNMA1-229ENST00000638249 PHLPP1O60346 1717 aa22.01■■□□□ 1.11
KCNMA1-229ENST00000638249 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
KCNMA1-229ENST00000638249 VGFO15240 615 aaPredicted RBP22■■□□□ 1.11
KCNMA1-229ENST00000638249 ASXL1Q8IXJ9 1541 aa22■■□□□ 1.11
KCNMA1-229ENST00000638249 COL16A1Q07092 1604 aaPredicted RBP22■■□□□ 1.11
KCNMA1-229ENST00000638249 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
KCNMA1-229ENST00000638249 ADGRF5Q8IZF2 1346 aa21.99■■□□□ 1.11
KCNMA1-229ENST00000638249 DCCP43146 1447 aa21.99■■□□□ 1.11
KCNMA1-229ENST00000638249 PTCH1Q13635 1447 aa21.99■■□□□ 1.11
KCNMA1-229ENST00000638249 PRAG1Q86YV5 1406 aa21.99■■□□□ 1.11
KCNMA1-229ENST00000638249 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
KCNMA1-229ENST00000638249 ADGRL3Q9HAR2 1447 aa21.98■■□□□ 1.11
KCNMA1-229ENST00000638249 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
KCNMA1-229ENST00000638249 ROBO2Q9HCK4 1378 aa21.97■■□□□ 1.11
KCNMA1-229ENST00000638249 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
KCNMA1-229ENST00000638249 MST1RQ04912 1400 aa21.95■■□□□ 1.1
KCNMA1-229ENST00000638249 CADPS2Q86UW7 1296 aa21.95■■□□□ 1.1
KCNMA1-229ENST00000638249 PIK3C2GO75747 1445 aa21.94■■□□□ 1.1
KCNMA1-229ENST00000638249 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
KCNMA1-229ENST00000638249 ATF3P18847 181 aa21.93■■□□□ 1.1
KCNMA1-229ENST00000638249 ANKRD30BQ9BXX2 1392 aa21.93■■□□□ 1.1
KCNMA1-229ENST00000638249 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
KCNMA1-229ENST00000638249 NRXN1Q9ULB1 1477 aa21.91■■□□□ 1.1
KCNMA1-229ENST00000638249 KNDC1Q76NI1 1749 aa21.9■■□□□ 1.1
KCNMA1-229ENST00000638249 MYOM2P54296 1465 aa21.9■■□□□ 1.1
KCNMA1-229ENST00000638249 BRINP3Q76B58 766 aa21.88■■□□□ 1.09
KCNMA1-229ENST00000638249 TECPR2O15040 1411 aa21.86■■□□□ 1.09
KCNMA1-229ENST00000638249 SHPRHQ149N8 1683 aa21.85■■□□□ 1.09
KCNMA1-229ENST00000638249 LAMC1P11047 1609 aa21.85■■□□□ 1.09
KCNMA1-229ENST00000638249 HRCP23327 699 aa21.85■■□□□ 1.09
KCNMA1-229ENST00000638249 CDC42BPGQ6DT37 1551 aa21.84■■□□□ 1.09
KCNMA1-229ENST00000638249 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.09
KCNMA1-229ENST00000638249 JCADQ9P266 1359 aa21.83■■□□□ 1.09
KCNMA1-229ENST00000638249 TMEM132EQ6IEE7 984 aa21.83■■□□□ 1.08
KCNMA1-229ENST00000638249 LRP6O75581 1613 aa21.83■■□□□ 1.08
KCNMA1-229ENST00000638249 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.08
KCNMA1-229ENST00000638249 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
KCNMA1-229ENST00000638249 RGS17Q9UGC6 210 aaPredicted RBP21.82■■□□□ 1.08
KCNMA1-229ENST00000638249 PLEKHH1Q9ULM0 1364 aa21.81■■□□□ 1.08
KCNMA1-229ENST00000638249 YTHDC2Q9H6S0 1430 aaKnown RBP21.81■■□□□ 1.08
KCNMA1-229ENST00000638249 SOCS7O14512 581 aa21.8■■□□□ 1.08
KCNMA1-229ENST00000638249 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
KCNMA1-229ENST00000638249 STK26Q9P289 416 aa21.79■■□□□ 1.08
KCNMA1-229ENST00000638249 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
KCNMA1-229ENST00000638249 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms