RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 NUTM2GQ5VZR2 741 aa20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 CECR2Q9BXF3 1484 aa20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 TTC16Q8NEE8 873 aa20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 ANO2Q9NQ90 1003 aa20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 ANKRD45Q5TZF3 282 aa20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 ATP2B2Q01814 1243 aa20.84■□□□□ 0.93
CACNA1A-253ENST00000637927 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.83■□□□□ 0.93
CACNA1A-253ENST00000637927 CENPJQ9HC77 1338 aaPredicted RBP20.83■□□□□ 0.92
CACNA1A-253ENST00000637927 HMMRO75330 724 aa20.83■□□□□ 0.92
CACNA1A-253ENST00000637927 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.92
CACNA1A-253ENST00000637927 CFAP44Q96MT7 982 aa20.83■□□□□ 0.92
CACNA1A-253ENST00000637927 EPS15P42566 896 aa20.82■□□□□ 0.92
CACNA1A-253ENST00000637927 HOMER1Q86YM7 354 aa20.82■□□□□ 0.92
CACNA1A-253ENST00000637927 EIF3AQ14152 1382 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-253ENST00000637927 RAB3GAP2Q9H2M9 1393 aa20.81■□□□□ 0.92
CACNA1A-253ENST00000637927 TRIM29Q14134 588 aa20.81■□□□□ 0.92
CACNA1A-253ENST00000637927 AIMP1Q12904 312 aaKnown RBP20.8■□□□□ 0.92
CACNA1A-253ENST00000637927 MINK1Q8N4C8 1332 aaPredicted RBP20.8■□□□□ 0.92
CACNA1A-253ENST00000637927 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
CACNA1A-253ENST00000637927 MAP7D2Q96T17 732 aa20.8■□□□□ 0.92
CACNA1A-253ENST00000637927 TPM1P09493 284 aa20.79■□□□□ 0.92
CACNA1A-253ENST00000637927 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
CACNA1A-253ENST00000637927 RALBP1Q15311 655 aa20.78■□□□□ 0.92
CACNA1A-253ENST00000637927 CCDC70Q6NSX1 233 aa20.78■□□□□ 0.92
CACNA1A-253ENST00000637927 PDILTQ8N807 584 aa20.78■□□□□ 0.92
CACNA1A-253ENST00000637927 CSPP1Q1MSJ5 1256 aa20.77■□□□□ 0.92
CACNA1A-253ENST00000637927 PANK3Q9H999 370 aa20.75■□□□□ 0.91
CACNA1A-253ENST00000637927 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
CACNA1A-253ENST00000637927 CCER2I3L3R5 266 aa20.75■□□□□ 0.91
CACNA1A-253ENST00000637927 ANKRD30AQ9BXX3 1397 aa20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 ATP2B1P20020 1258 aa20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 PSMD1Q99460 953 aa20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 BRPF1P55201 1214 aaPredicted RBP20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 PAXIP1Q6ZW49 1069 aaPredicted RBP20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
CACNA1A-253ENST00000637927 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-253ENST00000637927 COG3Q96JB2 828 aa20.73■□□□□ 0.91
CACNA1A-253ENST00000637927 NUTM2BA6NNL0 878 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-253ENST00000637927 NUTM2EB1AL46 878 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-253ENST00000637927 NUTM2AQ8IVF1 878 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-253ENST00000637927 RUFY1Q96T51 708 aa20.72■□□□□ 0.91
CACNA1A-253ENST00000637927 BICD2Q8TD16 824 aa20.71■□□□□ 0.91
CACNA1A-253ENST00000637927 ST18O60284 1047 aa20.71■□□□□ 0.91
CACNA1A-253ENST00000637927 NEFHP12036 1026 aa20.71■□□□□ 0.91
CACNA1A-253ENST00000637927 ECM2O94769 699 aaPredicted RBP20.71■□□□□ 0.91
CACNA1A-253ENST00000637927 NEUROD6Q96NK8 337 aa20.71■□□□□ 0.91
CACNA1A-253ENST00000637927 WWC2Q6AWC2 1192 aa20.7■□□□□ 0.9
CACNA1A-253ENST00000637927 CPLX1O14810 134 aa20.7■□□□□ 0.9
CACNA1A-253ENST00000637927 PSME1Q06323 249 aa20.7■□□□□ 0.9
CACNA1A-253ENST00000637927 TEFQ10587 303 aa20.69■□□□□ 0.9
CACNA1A-253ENST00000637927 SPDYE4A6NLX3 237 aa20.68■□□□□ 0.9
CACNA1A-253ENST00000637927 ERICH2A1L162 156 aa20.68■□□□□ 0.9
CACNA1A-253ENST00000637927 CAGE1Q8TC20 777 aa20.68■□□□□ 0.9
CACNA1A-253ENST00000637927 FHOD3Q2V2M9 1422 aa20.68■□□□□ 0.9
CACNA1A-253ENST00000637927 DIAPH3Q9NSV4 1193 aa20.68■□□□□ 0.9
CACNA1A-253ENST00000637927 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-253ENST00000637927 VPS37CA5D8V6 355 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-253ENST00000637927 LMOD3Q0VAK6 560 aa20.67■□□□□ 0.9
CACNA1A-253ENST00000637927 ZHX3Q9H4I2 956 aa20.67■□□□□ 0.9
CACNA1A-253ENST00000637927 RBM5P52756 815 aaKnown RBP eCLIP20.67■□□□□ 0.9
CACNA1A-253ENST00000637927 MATR3P43243 847 aaKnown RBP eCLIP20.67■□□□□ 0.9
CACNA1A-253ENST00000637927 IPO7O95373 1038 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-253ENST00000637927 WASHC4Q2M389 1173 aa20.66■□□□□ 0.9
CACNA1A-253ENST00000637927 CRBNQ96SW2 442 aa20.66■□□□□ 0.9
CACNA1A-253ENST00000637927 FAM13BQ9NYF5 915 aa20.66■□□□□ 0.9
CACNA1A-253ENST00000637927 MAPK8IP2Q13387 824 aaPredicted RBP20.66■□□□□ 0.9
CACNA1A-253ENST00000637927 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
CACNA1A-253ENST00000637927 HSP90AA2PQ14568 343 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-253ENST00000637927 PHF14O94880 888 aa20.65■□□□□ 0.9
CACNA1A-253ENST00000637927 PIBF1Q8WXW3 757 aa20.65■□□□□ 0.9
CACNA1A-253ENST00000637927 ST20-MTHFSA0A0A6YYL1 179 aa20.65■□□□□ 0.9
CACNA1A-253ENST00000637927 HMOX1P09601 288 aa20.64■□□□□ 0.89
CACNA1A-253ENST00000637927 NACADO15069 1562 aa20.64■□□□□ 0.89
CACNA1A-253ENST00000637927 CCDC47Q96A33 483 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-253ENST00000637927 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
CACNA1A-253ENST00000637927 WDR78Q5VTH9 848 aa20.63■□□□□ 0.89
CACNA1A-253ENST00000637927 OFD1O75665 1012 aa20.63■□□□□ 0.89
CACNA1A-253ENST00000637927 PIP4K2BP78356 416 aa20.63■□□□□ 0.89
CACNA1A-253ENST00000637927 CEBPZQ03701 1054 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-253ENST00000637927 IFIT2P09913 472 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-253ENST00000637927 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
CACNA1A-253ENST00000637927 IPO9Q96P70 1041 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-253ENST00000637927 PODXL2Q9NZ53 605 aa20.6■□□□□ 0.89
CACNA1A-253ENST00000637927 HSP90AB3PQ58FF7 597 aa20.6■□□□□ 0.89
CACNA1A-253ENST00000637927 GRM1Q13255 1194 aa20.59■□□□□ 0.89
CACNA1A-253ENST00000637927 GPS2Q13227 327 aa20.59■□□□□ 0.89
CACNA1A-253ENST00000637927 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
CACNA1A-253ENST00000637927 TRDNQ13061 729 aa20.59■□□□□ 0.89
CACNA1A-253ENST00000637927 CA8P35219 290 aa20.59■□□□□ 0.89
CACNA1A-253ENST00000637927 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
CACNA1A-253ENST00000637927 HDAC5Q9UQL6 1122 aa20.58■□□□□ 0.89
CACNA1A-253ENST00000637927 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
CACNA1A-253ENST00000637927 ANKRD20A12PQ8NF67 263 aa20.58■□□□□ 0.88
CACNA1A-253ENST00000637927 SEPT11Q9NVA2 429 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-253ENST00000637927 FAM161AQ3B820 660 aa20.57■□□□□ 0.88
CACNA1A-253ENST00000637927 STRN4Q9NRL3 753 aa20.57■□□□□ 0.88
CACNA1A-253ENST00000637927 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
CACNA1A-253ENST00000637927 MPNDQ8N594 471 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms