RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 NKTRP30414 1462 aaKnown RBP28.15■■■□□ 2.1
CTSD-209ENST00000637158 PPP1R15AO75807 674 aaPredicted RBP28.11■■■□□ 2.09
CTSD-209ENST00000637158 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
CTSD-209ENST00000637158 MSH6P52701 1360 aa28.1■■■□□ 2.09
CTSD-209ENST00000637158 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.09■■■□□ 2.09
CTSD-209ENST00000637158 NWD1Q149M9 1564 aa28.08■■■□□ 2.09
CTSD-209ENST00000637158 ZFYVE9O95405 1425 aa28.08■■■□□ 2.09
CTSD-209ENST00000637158 RBM33Q96EV2 1170 aaKnown RBP28.06■■■□□ 2.08
CTSD-209ENST00000637158 RIMS2Q9UQ26 1411 aa28.06■■■□□ 2.08
CTSD-209ENST00000637158 TBX22Q9Y458 520 aa28.05■■■□□ 2.08
CTSD-209ENST00000637158 ROCK1Q13464 1354 aa28.04■■■□□ 2.08
CTSD-209ENST00000637158 SLAIN2Q9P270 581 aa28.04■■■□□ 2.08
CTSD-209ENST00000637158 RGS17Q9UGC6 210 aaPredicted RBP28.04■■■□□ 2.08
CTSD-209ENST00000637158 ROBO1Q9Y6N7 1651 aa28.03■■■□□ 2.08
CTSD-209ENST00000637158 CHGAP10645 457 aaKnown RBP28.02■■■□□ 2.08
CTSD-209ENST00000637158 GCC2Q8IWJ2 1684 aa28.02■■■□□ 2.08
CTSD-209ENST00000637158 TMEM131LA2VDJ0 1609 aa28.01■■■□□ 2.07
CTSD-209ENST00000637158 UNC13BO14795 1591 aa28.01■■■□□ 2.07
CTSD-209ENST00000637158 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.07
CTSD-209ENST00000637158 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
CTSD-209ENST00000637158 MYO5BQ9ULV0 1848 aa27.95■■■□□ 2.07
CTSD-209ENST00000637158 PIK3R4Q99570 1358 aa27.95■■■□□ 2.06
CTSD-209ENST00000637158 C14orf37Q86TY3 774 aa27.93■■■□□ 2.06
CTSD-209ENST00000637158 NUP155O75694 1391 aa27.93■■■□□ 2.06
CTSD-209ENST00000637158 JCADQ9P266 1359 aa27.92■■■□□ 2.06
CTSD-209ENST00000637158 IQGAP3Q86VI3 1631 aa27.92■■■□□ 2.06
CTSD-209ENST00000637158 E9PCH4 1651 aa27.91■■■□□ 2.06
CTSD-209ENST00000637158 CADPS2Q86UW7 1296 aa27.91■■■□□ 2.06
CTSD-209ENST00000637158 DIP2AQ14689 1571 aa27.9■■■□□ 2.06
CTSD-209ENST00000637158 C19orf44Q9H6X5 657 aa27.89■■■□□ 2.06
CTSD-209ENST00000637158 ADAMTS13Q76LX8 1427 aa27.89■■■□□ 2.06
CTSD-209ENST00000637158 NUTM2DQ5VT03 806 aaPredicted RBP27.88■■■□□ 2.05
CTSD-209ENST00000637158 POTEAQ6S8J7 498 aa27.88■■■□□ 2.05
CTSD-209ENST00000637158 ATF3P18847 181 aa27.87■■■□□ 2.05
CTSD-209ENST00000637158 PHLPP1O60346 1717 aa27.87■■■□□ 2.05
CTSD-209ENST00000637158 ITGAEP38570 1179 aa27.85■■■□□ 2.05
CTSD-209ENST00000637158 TRPM2O94759 1503 aa27.82■■■□□ 2.04
CTSD-209ENST00000637158 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
CTSD-209ENST00000637158 SPATA31A6Q5VVP1 1343 aa27.81■■■□□ 2.04
CTSD-209ENST00000637158 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.76■■■□□ 2.03
CTSD-209ENST00000637158 COL16A1Q07092 1604 aaPredicted RBP27.76■■■□□ 2.03
CTSD-209ENST00000637158 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
CTSD-209ENST00000637158 MEX3CQ5U5Q3 659 aaKnown RBP27.73■■■□□ 2.03
CTSD-209ENST00000637158 DCCP43146 1447 aa27.73■■■□□ 2.03
CTSD-209ENST00000637158 AHDC1Q5TGY3 1603 aaPredicted RBP27.72■■■□□ 2.03
CTSD-209ENST00000637158 ZNF772Q68DY9 489 aaPredicted RBP27.72■■■□□ 2.03
CTSD-209ENST00000637158 PTPRUQ92729 1446 aa27.72■■■□□ 2.03
CTSD-209ENST00000637158 SETBP1Q9Y6X0 1596 aa27.7■■■□□ 2.03
CTSD-209ENST00000637158 BRINP3Q76B58 766 aa27.69■■■□□ 2.02
CTSD-209ENST00000637158 SPHKAPQ2M3C7 1700 aa27.69■■■□□ 2.02
CTSD-209ENST00000637158 PPARGC1BQ86YN6 1023 aaKnown RBP27.67■■■□□ 2.02
CTSD-209ENST00000637158 SHPRHQ149N8 1683 aa27.64■■■□□ 2.02
CTSD-209ENST00000637158 LRP6O75581 1613 aa27.63■■■□□ 2.01
CTSD-209ENST00000637158 NRXN3Q9Y4C0 1643 aa27.63■■■□□ 2.01
CTSD-209ENST00000637158 XRN1Q8IZH2 1706 aaKnown RBP27.63■■■□□ 2.01
CTSD-209ENST00000637158 METP08581 1390 aa27.62■■■□□ 2.01
CTSD-209ENST00000637158 LRRC59Q96AG4 307 aaKnown RBP27.6■■■□□ 2.01
CTSD-209ENST00000637158 MST1RQ04912 1400 aa27.58■■■□□ 2.01
CTSD-209ENST00000637158 SETD5Q9C0A6 1442 aa27.58■■■□□ 2.01
CTSD-209ENST00000637158 ASXL1Q8IXJ9 1541 aa27.58■■■□□ 2.01
CTSD-209ENST00000637158 RRBP1Q9P2E9 1410 aaKnown RBP27.58■■■□□ 2
CTSD-209ENST00000637158 VGFO15240 615 aaPredicted RBP27.57■■■□□ 2
CTSD-209ENST00000637158 ADGRL3Q9HAR2 1447 aa27.56■■■□□ 2
CTSD-209ENST00000637158 NEXMIFQ5QGS0 1516 aa27.56■■■□□ 2
CTSD-209ENST00000637158 NUTM2BA6NNL0 878 aaPredicted RBP27.55■■■□□ 2
CTSD-209ENST00000637158 NUTM2EB1AL46 878 aaPredicted RBP27.55■■■□□ 2
CTSD-209ENST00000637158 RXRBP28702 533 aa27.55■■■□□ 2
CTSD-209ENST00000637158 NUTM2AQ8IVF1 878 aaPredicted RBP27.55■■■□□ 2
CTSD-209ENST00000637158 NAIPQ13075 1403 aa27.55■■■□□ 2
CTSD-209ENST00000637158 CLTCL1P53675 1640 aa27.54■■■□□ 2
CTSD-209ENST00000637158 RPGRIP1LQ68CZ1 1315 aa27.52■■■□□ 2
CTSD-209ENST00000637158 KIF1BO60333 1816 aa27.51■■□□□ 1.99
CTSD-209ENST00000637158 TRIM52Q96A61 297 aa27.51■■□□□ 1.99
CTSD-209ENST00000637158 SETD1AO15047 1707 aaKnown RBP27.5■■□□□ 1.99
CTSD-209ENST00000637158 NHSL1Q5SYE7 1610 aa27.49■■□□□ 1.99
CTSD-209ENST00000637158 PTCH1Q13635 1447 aa27.47■■□□□ 1.99
CTSD-209ENST00000637158 AFF2P51816 1311 aa27.46■■□□□ 1.99
CTSD-209ENST00000637158 UPF1Q92900 1129 aaKnown RBP eCLIP27.46■■□□□ 1.992e-13■■■■■ 51.7
CTSD-209ENST00000637158 CDK12Q9NYV4 1490 aaPredicted RBP27.45■■□□□ 1.99
CTSD-209ENST00000637158 HFM1A2PYH4 1435 aa27.45■■□□□ 1.98
CTSD-209ENST00000637158 SLC4A1APQ9BWU0 796 aaKnown RBP27.45■■□□□ 1.98
CTSD-209ENST00000637158 C1orf167Q5SNV9 1468 aa27.44■■□□□ 1.98
CTSD-209ENST00000637158 NALCNQ8IZF0 1738 aa27.42■■□□□ 1.98
CTSD-209ENST00000637158 PNPLA6Q8IY17 1366 aa27.42■■□□□ 1.98
CTSD-209ENST00000637158 DDX17Q92841 729 aaKnown RBP27.41■■□□□ 1.98
CTSD-209ENST00000637158 PRAG1Q86YV5 1406 aa27.41■■□□□ 1.98
CTSD-209ENST00000637158 C8orf37Q96NL8 207 aa27.4■■□□□ 1.98
CTSD-209ENST00000637158 ROBO2Q9HCK4 1378 aa27.39■■□□□ 1.98
CTSD-209ENST00000637158 QTRT2Q9H974 415 aaKnown RBP27.38■■□□□ 1.97
CTSD-209ENST00000637158 RBM6P78332 1123 aaKnown RBP27.37■■□□□ 1.97
CTSD-209ENST00000637158 SOS2Q07890 1332 aaPredicted RBP27.36■■□□□ 1.97
CTSD-209ENST00000637158 NGLY1Q96IV0 654 aa27.35■■□□□ 1.97
CTSD-209ENST00000637158 ORAI2Q96SN7 254 aa27.34■■□□□ 1.97
CTSD-209ENST00000637158 LAMC1P11047 1609 aa27.34■■□□□ 1.97
CTSD-209ENST00000637158 ADAMTS2O95450 1211 aa27.31■■□□□ 1.96
CTSD-209ENST00000637158 PPLO60437 1756 aa27.29■■□□□ 1.96
CTSD-209ENST00000637158 CCDC144AA2RUR9 1427 aa27.27■■□□□ 1.96
CTSD-209ENST00000637158 NPHP3Q7Z494 1330 aa27.27■■□□□ 1.96
CTSD-209ENST00000637158 ESCO1Q5FWF5 840 aa27.25■■□□□ 1.95
CTSD-209ENST00000637158 USP21Q9UK80 565 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms