RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-238ENST00000635273 A0A0G2JS52 829 aa12.45□□□□□ -0.42
SMARCA2-238ENST00000635273 RBM46Q8TBY0 533 aaKnown RBP12.45□□□□□ -0.42
SMARCA2-238ENST00000635273 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
SMARCA2-238ENST00000635273 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
SMARCA2-238ENST00000635273 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
SMARCA2-238ENST00000635273 A6NJR5 290 aa12.42□□□□□ -0.42
SMARCA2-238ENST00000635273 MCM6Q14566 821 aa12.42□□□□□ -0.42
SMARCA2-238ENST00000635273 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
SMARCA2-238ENST00000635273 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
SMARCA2-238ENST00000635273 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
SMARCA2-238ENST00000635273 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
SMARCA2-238ENST00000635273 COL9A1P20849 921 aa12.4□□□□□ -0.42
SMARCA2-238ENST00000635273 PTPN5P54829 565 aa12.4□□□□□ -0.42
SMARCA2-238ENST00000635273 Q6ZNB5 142 aa12.4□□□□□ -0.42
SMARCA2-238ENST00000635273 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMARCA2-238ENST00000635273 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
SMARCA2-238ENST00000635273 APBB1O00213 710 aa12.39□□□□□ -0.43
SMARCA2-238ENST00000635273 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
SMARCA2-238ENST00000635273 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
SMARCA2-238ENST00000635273 TBC1D2Q9BYX2 928 aa12.39□□□□□ -0.43
SMARCA2-238ENST00000635273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
SMARCA2-238ENST00000635273 EYA1Q99502 592 aa12.38□□□□□ -0.43
SMARCA2-238ENST00000635273 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
SMARCA2-238ENST00000635273 RCCD1A6NED2 376 aa12.37□□□□□ -0.43
SMARCA2-238ENST00000635273 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-238ENST00000635273 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
SMARCA2-238ENST00000635273 ARID3AQ99856 593 aa12.37□□□□□ -0.43
SMARCA2-238ENST00000635273 TRAK2O60296 914 aa12.36□□□□□ -0.43
SMARCA2-238ENST00000635273 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
SMARCA2-238ENST00000635273 TSKSQ9UJT2 592 aa12.35□□□□□ -0.43
SMARCA2-238ENST00000635273 PSEN2P49810 448 aa12.34□□□□□ -0.43
SMARCA2-238ENST00000635273 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
SMARCA2-238ENST00000635273 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
SMARCA2-238ENST00000635273 PTPREP23469 700 aa12.32□□□□□ -0.44
SMARCA2-238ENST00000635273 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
SMARCA2-238ENST00000635273 CD46P15529 392 aa12.31□□□□□ -0.44
SMARCA2-238ENST00000635273 NUDT18Q6ZVK8 323 aa12.31□□□□□ -0.44
SMARCA2-238ENST00000635273 LIMD1Q9UGP4 676 aa12.31□□□□□ -0.44
SMARCA2-238ENST00000635273 DNAJB2P25686 324 aa12.29□□□□□ -0.44
SMARCA2-238ENST00000635273 RFC5P40937 340 aa12.29□□□□□ -0.44
SMARCA2-238ENST00000635273 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-238ENST00000635273 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
SMARCA2-238ENST00000635273 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
SMARCA2-238ENST00000635273 TATDN2Q93075 761 aa12.29□□□□□ -0.44
SMARCA2-238ENST00000635273 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
SMARCA2-238ENST00000635273 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
SMARCA2-238ENST00000635273 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
SMARCA2-238ENST00000635273 BANK1Q8NDB2 785 aa12.28□□□□□ -0.44
SMARCA2-238ENST00000635273 POM121Q96HA1 1249 aa12.28□□□□□ -0.44
SMARCA2-238ENST00000635273 PACS2Q86VP3 889 aa12.27□□□□□ -0.45
SMARCA2-238ENST00000635273 PROSER2Q86WR7 435 aaPredicted RBP12.27□□□□□ -0.45
SMARCA2-238ENST00000635273 PNMA3Q9UL41 463 aa12.27□□□□□ -0.45
SMARCA2-238ENST00000635273 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
SMARCA2-238ENST00000635273 PPP2R2DQ66LE6 453 aa12.26□□□□□ -0.45
SMARCA2-238ENST00000635273 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
SMARCA2-238ENST00000635273 SPTLC1O15269 473 aa12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 RAD21O60216 631 aa12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 TMEM259Q4ZIN3 620 aa12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 FNBP4Q8N3X1 1017 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 SNRKQ9NRH2 765 aa12.25□□□□□ -0.45
SMARCA2-238ENST00000635273 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
SMARCA2-238ENST00000635273 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
SMARCA2-238ENST00000635273 THSD4Q6ZMP0 1018 aa12.23□□□□□ -0.45
SMARCA2-238ENST00000635273 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
SMARCA2-238ENST00000635273 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
SMARCA2-238ENST00000635273 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
SMARCA2-238ENST00000635273 LAPTM4AQ15012 233 aa12.21□□□□□ -0.45
SMARCA2-238ENST00000635273 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
SMARCA2-238ENST00000635273 KCNK17Q96T54 332 aa12.21□□□□□ -0.45
SMARCA2-238ENST00000635273 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.45
SMARCA2-238ENST00000635273 SMAPO00193 183 aa12.2□□□□□ -0.46
SMARCA2-238ENST00000635273 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
SMARCA2-238ENST00000635273 GJA5P36382 358 aa12.19□□□□□ -0.46
SMARCA2-238ENST00000635273 NDUFV2P19404 249 aa12.18□□□□□ -0.46
SMARCA2-238ENST00000635273 CSPP1Q1MSJ5 1256 aa12.18□□□□□ -0.46
SMARCA2-238ENST00000635273 LILRB3O75022 631 aa12.17□□□□□ -0.46
SMARCA2-238ENST00000635273 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
SMARCA2-238ENST00000635273 QPCTQ16769 361 aa12.16□□□□□ -0.46
SMARCA2-238ENST00000635273 RDH13Q8NBN7 331 aa12.16□□□□□ -0.46
SMARCA2-238ENST00000635273 MTMR14Q8NCE2 650 aa12.15□□□□□ -0.46
SMARCA2-238ENST00000635273 WNT2BQ93097 391 aa12.15□□□□□ -0.46
SMARCA2-238ENST00000635273 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
SMARCA2-238ENST00000635273 KDM4AO75164 1064 aa12.14□□□□□ -0.47
SMARCA2-238ENST00000635273 ZBED2Q9BTP6 218 aa12.14□□□□□ -0.47
SMARCA2-238ENST00000635273 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-238ENST00000635273 SLC4A5Q9BY07 1137 aa12.13□□□□□ -0.47
SMARCA2-238ENST00000635273 GCGRP47871 477 aa12.12□□□□□ -0.47
SMARCA2-238ENST00000635273 USP46P62068 366 aa12.11□□□□□ -0.47
SMARCA2-238ENST00000635273 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
SMARCA2-238ENST00000635273 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
SMARCA2-238ENST00000635273 NUTM2BA6NNL0 878 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 NUTM2EB1AL46 878 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 SOCS7O14512 581 aa12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 AP1G2O75843 785 aa12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 PRPF38BQ5VTL8 546 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 NUTM2AQ8IVF1 878 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-238ENST00000635273 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms