RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ZMYND10O75800 440 aa8.02□□□□□ -1.13
SRP54-214ENST00000630962 BCAMP50895 628 aa8.02□□□□□ -1.13
SRP54-214ENST00000630962 SWT1Q5T5J6 900 aaKnown RBP8.02□□□□□ -1.13
SRP54-214ENST00000630962 BARGINQ6ZT62 677 aa8.02□□□□□ -1.13
SRP54-214ENST00000630962 ZC3H15Q8WU90 426 aaKnown RBP8.02□□□□□ -1.13
SRP54-214ENST00000630962 SULF1Q8IWU6 871 aa8.01□□□□□ -1.13
SRP54-214ENST00000630962 DAXXQ9UER7 740 aaPredicted RBP8.01□□□□□ -1.13
SRP54-214ENST00000630962 C3orf80F5H4A9 247 aa8□□□□□ -1.13
SRP54-214ENST00000630962 RNF40O75150 1001 aa8□□□□□ -1.13
SRP54-214ENST00000630962 FECHP22830 423 aa8□□□□□ -1.13
SRP54-214ENST00000630962 KMT5BQ4FZB7 885 aa7.99□□□□□ -1.13
SRP54-214ENST00000630962 WBP1LQ9NX94 342 aa7.99□□□□□ -1.13
SRP54-214ENST00000630962 IFFO2Q5TF58 517 aa7.98□□□□□ -1.13
SRP54-214ENST00000630962 FAM161AQ3B820 660 aa7.97□□□□□ -1.13
SRP54-214ENST00000630962 CLCN1P35523 988 aa7.96□□□□□ -1.14
SRP54-214ENST00000630962 CCDC102AQ96A19 550 aa7.96□□□□□ -1.14
SRP54-214ENST00000630962 AK7Q96M32 723 aa7.95□□□□□ -1.14
SRP54-214ENST00000630962 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
SRP54-214ENST00000630962 ITGBL1O95965 494 aaPredicted RBP7.93□□□□□ -1.14
SRP54-214ENST00000630962 GPCPD1Q9NPB8 672 aa7.93□□□□□ -1.14
SRP54-214ENST00000630962 KCNC4Q03721 635 aa7.92□□□□□ -1.14
SRP54-214ENST00000630962 RDH13Q8NBN7 331 aa7.92□□□□□ -1.14
SRP54-214ENST00000630962 ACTN4O43707 911 aaKnown RBP7.91□□□□□ -1.14
SRP54-214ENST00000630962 AMHR2Q16671 573 aa7.91□□□□□ -1.14
SRP54-214ENST00000630962 GRIPAP1Q4V328 841 aa7.91□□□□□ -1.14
SRP54-214ENST00000630962 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
SRP54-214ENST00000630962 DDX11L8A8MPP1 907 aa7.9□□□□□ -1.14
SRP54-214ENST00000630962 CFHP08603 1231 aa7.9□□□□□ -1.14
SRP54-214ENST00000630962 APLP1P51693 650 aa7.89□□□□□ -1.15
SRP54-214ENST00000630962 MDM2Q00987 491 aaPredicted RBP7.89□□□□□ -1.15
SRP54-214ENST00000630962 PHOX2BQ99453 314 aa7.89□□□□□ -1.15
SRP54-214ENST00000630962 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
SRP54-214ENST00000630962 TTLL12Q14166 644 aaPredicted RBP7.88□□□□□ -1.15
SRP54-214ENST00000630962 NR1I2O75469 434 aa7.87□□□□□ -1.15
SRP54-214ENST00000630962 SLC10A3P09131 477 aa7.87□□□□□ -1.15
SRP54-214ENST00000630962 GCGRP47871 477 aa7.87□□□□□ -1.15
SRP54-214ENST00000630962 USP46P62068 366 aa7.87□□□□□ -1.15
SRP54-214ENST00000630962 TRIM66O15016 1216 aa7.86□□□□□ -1.15
SRP54-214ENST00000630962 DIXDC1Q155Q3 683 aa7.86□□□□□ -1.15
SRP54-214ENST00000630962 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
SRP54-214ENST00000630962 MTRQ99707 1265 aa7.86□□□□□ -1.15
SRP54-214ENST00000630962 TMUB1Q9BVT8 246 aa7.86□□□□□ -1.15
SRP54-214ENST00000630962 RGS20O76081 388 aa7.85□□□□□ -1.15
SRP54-214ENST00000630962 CD46P15529 392 aa7.85□□□□□ -1.15
SRP54-214ENST00000630962 ATP6V1AP38606 617 aa7.85□□□□□ -1.15
SRP54-214ENST00000630962 FAM217BQ9NTX9 383 aaPredicted RBP7.85□□□□□ -1.15
SRP54-214ENST00000630962 GGCXP38435 758 aa7.84□□□□□ -1.15
SRP54-214ENST00000630962 SLC24A3Q9HC58 644 aa7.83□□□□□ -1.16
SRP54-214ENST00000630962 KDM4AO75164 1064 aa7.82□□□□□ -1.16
SRP54-214ENST00000630962 ZPR1O75312 459 aa7.82□□□□□ -1.16
SRP54-214ENST00000630962 SSTR3P32745 418 aaPredicted RBP7.82□□□□□ -1.16
SRP54-214ENST00000630962 NUTM1Q86Y26 1132 aa7.82□□□□□ -1.16
SRP54-214ENST00000630962 NLRP7Q8WX94 980 aa7.82□□□□□ -1.16
SRP54-214ENST00000630962 PDE4DQ08499 809 aa7.81□□□□□ -1.16
SRP54-214ENST00000630962 Q3C1V9 767 aa7.81□□□□□ -1.16
SRP54-214ENST00000630962 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
SRP54-214ENST00000630962 SALL2Q9Y467 1007 aaPredicted RBP7.81□□□□□ -1.16
SRP54-214ENST00000630962 A0A0G2JS52 829 aa7.8□□□□□ -1.16
SRP54-214ENST00000630962 COPS2P61201 443 aa7.8□□□□□ -1.16
SRP54-214ENST00000630962 BLOC1S3Q6QNY0 202 aa7.8□□□□□ -1.16
SRP54-214ENST00000630962 FUT2Q10981 343 aa7.79□□□□□ -1.16
SRP54-214ENST00000630962 MORN1Q5T089 497 aa7.78□□□□□ -1.16
SRP54-214ENST00000630962 SCUBE3Q8IX30 993 aa7.78□□□□□ -1.16
SRP54-214ENST00000630962 PARP9Q8IXQ6 854 aa7.78□□□□□ -1.16
SRP54-214ENST00000630962 FMNL1O95466 1100 aaPredicted RBP7.77□□□□□ -1.17
SRP54-214ENST00000630962 ADH1BP00325 375 aa7.76□□□□□ -1.17
SRP54-214ENST00000630962 GJA5P36382 358 aa7.76□□□□□ -1.17
SRP54-214ENST00000630962 ZNF516Q92618 1163 aa7.75□□□□□ -1.17
SRP54-214ENST00000630962 BEGAINQ9BUH8 593 aa7.75□□□□□ -1.17
SRP54-214ENST00000630962 REPIN1Q9BWE0 567 aaKnown RBP7.75□□□□□ -1.17
SRP54-214ENST00000630962 HOXA2O43364 376 aa7.74□□□□□ -1.17
SRP54-214ENST00000630962 PUS10Q3MIT2 529 aaKnown RBP7.74□□□□□ -1.17
SRP54-214ENST00000630962 SPSB2Q99619 263 aa7.74□□□□□ -1.17
SRP54-214ENST00000630962 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
SRP54-214ENST00000630962 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
SRP54-214ENST00000630962 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
SRP54-214ENST00000630962 DDRGK1Q96HY6 314 aa7.73□□□□□ -1.17
SRP54-214ENST00000630962 SLC27A5Q9Y2P5 690 aa7.73□□□□□ -1.17
SRP54-214ENST00000630962 SLC6A16Q9GZN6 736 aa7.72□□□□□ -1.17
SRP54-214ENST00000630962 SPDYE5A6NIY4 337 aa7.71□□□□□ -1.18
SRP54-214ENST00000630962 MSS51Q4VC12 460 aa7.71□□□□□ -1.18
SRP54-214ENST00000630962 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
SRP54-214ENST00000630962 BRICD5Q6PL45 260 aa7.71□□□□□ -1.18
SRP54-214ENST00000630962 SPIRE2Q8WWL2 714 aa7.71□□□□□ -1.18
SRP54-214ENST00000630962 FDX1P10109 184 aa7.7□□□□□ -1.18
SRP54-214ENST00000630962 THAP11Q96EK4 314 aa7.7□□□□□ -1.18
SRP54-214ENST00000630962 MS4A1P11836 297 aa7.69□□□□□ -1.18
SRP54-214ENST00000630962 ANKLE1Q8NAG6 615 aa7.69□□□□□ -1.18
SRP54-214ENST00000630962 USB1Q9BQ65 265 aaKnown RBP7.69□□□□□ -1.18
SRP54-214ENST00000630962 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
SRP54-214ENST00000630962 TUSC1Q2TAM9 212 aa7.68□□□□□ -1.18
SRP54-214ENST00000630962 NKX2-3Q8TAU0 364 aa7.68□□□□□ -1.18
SRP54-214ENST00000630962 KDM4CQ9H3R0 1056 aa7.68□□□□□ -1.18
SRP54-214ENST00000630962 V9GY48 417 aaPredicted RBP7.68□□□□□ -1.18
SRP54-214ENST00000630962 TLL1O43897 1013 aa7.67□□□□□ -1.18
SRP54-214ENST00000630962 RETREG3Q86VR2 466 aa7.67□□□□□ -1.18
SRP54-214ENST00000630962 SPTLC1O15269 473 aa7.66□□□□□ -1.18
SRP54-214ENST00000630962 S1PR4O95977 384 aa7.66□□□□□ -1.18
SRP54-214ENST00000630962 PRPF38BQ5VTL8 546 aaKnown RBP7.66□□□□□ -1.18
SRP54-214ENST00000630962 C6orf229H3BNL8 230 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms