RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 SLC52A1Q9NWF4 448 aa31.54■■■□□ 2.64
TARDBP-228ENST00000629725 MSH6P52701 1360 aa31.53■■■□□ 2.64
TARDBP-228ENST00000629725 PHLPP1O60346 1717 aa31.49■■■□□ 2.63
TARDBP-228ENST00000629725 SLAIN2Q9P270 581 aa31.48■■■□□ 2.63
TARDBP-228ENST00000629725 CHD2O14647 1828 aaKnown RBP31.46■■■□□ 2.63
TARDBP-228ENST00000629725 MYO5BQ9ULV0 1848 aa31.45■■■□□ 2.63
TARDBP-228ENST00000629725 RPRD2Q5VT52 1461 aaKnown RBP31.45■■■□□ 2.62
TARDBP-228ENST00000629725 JCADQ9P266 1359 aa31.43■■■□□ 2.62
TARDBP-228ENST00000629725 ZFYVE9O95405 1425 aa31.42■■■□□ 2.62
TARDBP-228ENST00000629725 ADGRL2O95490 1459 aa31.42■■■□□ 2.62
TARDBP-228ENST00000629725 PLEKHG1Q9ULL1 1385 aa31.42■■■□□ 2.62
TARDBP-228ENST00000629725 GCC2Q8IWJ2 1684 aa31.41■■■□□ 2.62
TARDBP-228ENST00000629725 PPP1R15AO75807 674 aaPredicted RBP31.4■■■□□ 2.62
TARDBP-228ENST00000629725 HDGFP51858 240 aaKnown RBP31.4■■■□□ 2.62
TARDBP-228ENST00000629725 SETD1AO15047 1707 aaKnown RBP31.38■■■□□ 2.61
TARDBP-228ENST00000629725 RIMS2Q9UQ26 1411 aa31.38■■■□□ 2.61
TARDBP-228ENST00000629725 TMEM131LA2VDJ0 1609 aa31.36■■■□□ 2.61
TARDBP-228ENST00000629725 ANKRD50Q9ULJ7 1429 aa31.36■■■□□ 2.61
TARDBP-228ENST00000629725 COL16A1Q07092 1604 aaPredicted RBP31.35■■■□□ 2.61
TARDBP-228ENST00000629725 NCOA3Q9Y6Q9 1424 aa31.32■■■□□ 2.61
TARDBP-228ENST00000629725 TBX22Q9Y458 520 aa31.32■■■□□ 2.6
TARDBP-228ENST00000629725 FAM50AQ14320 339 aaKnown RBP31.31■■■□□ 2.6
TARDBP-228ENST00000629725 C14orf37Q86TY3 774 aa31.3■■■□□ 2.6
TARDBP-228ENST00000629725 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.29■■■□□ 2.6
TARDBP-228ENST00000629725 SPATA31A6Q5VVP1 1343 aa31.27■■■□□ 2.6
TARDBP-228ENST00000629725 CHGAP10645 457 aaKnown RBP31.27■■■□□ 2.6
TARDBP-228ENST00000629725 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.26■■■□□ 2.59
TARDBP-228ENST00000629725 CADPS2Q86UW7 1296 aa31.25■■■□□ 2.59
TARDBP-228ENST00000629725 LRP6O75581 1613 aa31.24■■■□□ 2.59
TARDBP-228ENST00000629725 MEX3CQ5U5Q3 659 aaKnown RBP31.24■■■□□ 2.59
TARDBP-228ENST00000629725 DIP2AQ14689 1571 aa31.23■■■□□ 2.59
TARDBP-228ENST00000629725 C19orf44Q9H6X5 657 aa31.23■■■□□ 2.59
TARDBP-228ENST00000629725 ADAMTS13Q76LX8 1427 aa31.23■■■□□ 2.59
TARDBP-228ENST00000629725 UNC13BO14795 1591 aa31.22■■■□□ 2.59
TARDBP-228ENST00000629725 ATF3P18847 181 aa31.22■■■□□ 2.59
TARDBP-228ENST00000629725 NUTM2DQ5VT03 806 aaPredicted RBP31.22■■■□□ 2.59
TARDBP-228ENST00000629725 AHDC1Q5TGY3 1603 aaPredicted RBP31.22■■■□□ 2.59
TARDBP-228ENST00000629725 ZNF772Q68DY9 489 aaPredicted RBP31.21■■■□□ 2.59
TARDBP-228ENST00000629725 E9PCH4 1651 aa31.21■■■□□ 2.59
TARDBP-228ENST00000629725 PIK3R4Q99570 1358 aa31.2■■■□□ 2.59
TARDBP-228ENST00000629725 SHPRHQ149N8 1683 aa31.2■■■□□ 2.59
TARDBP-228ENST00000629725 TRPM2O94759 1503 aa31.14■■■□□ 2.58
TARDBP-228ENST00000629725 TRIM52Q96A61 297 aa31.13■■■□□ 2.57
TARDBP-228ENST00000629725 UPF1Q92900 1129 aaKnown RBP eCLIP31.12■■■□□ 2.572e-11■■■□□ 15.1
TARDBP-228ENST00000629725 AMOTL2Q9Y2J4 779 aa31.12■■■□□ 2.57
TARDBP-228ENST00000629725 IQGAP3Q86VI3 1631 aa31.12■■■□□ 2.57
TARDBP-228ENST00000629725 BRINP3Q76B58 766 aa31.1■■■□□ 2.57
TARDBP-228ENST00000629725 PTPRUQ92729 1446 aa31.07■■■□□ 2.57
TARDBP-228ENST00000629725 RXRBP28702 533 aa31.07■■■□□ 2.56
TARDBP-228ENST00000629725 NUTM2BA6NNL0 878 aaPredicted RBP31.05■■■□□ 2.56
TARDBP-228ENST00000629725 NUTM2EB1AL46 878 aaPredicted RBP31.05■■■□□ 2.56
TARDBP-228ENST00000629725 NUTM2AQ8IVF1 878 aaPredicted RBP31.05■■■□□ 2.56
TARDBP-228ENST00000629725 DCCP43146 1447 aa31.05■■■□□ 2.56
TARDBP-228ENST00000629725 ROCK1Q13464 1354 aa31.05■■■□□ 2.56
TARDBP-228ENST00000629725 ASXL1Q8IXJ9 1541 aa31.02■■■□□ 2.56
TARDBP-228ENST00000629725 NUP155O75694 1391 aa31.02■■■□□ 2.56
TARDBP-228ENST00000629725 XRN1Q8IZH2 1706 aaKnown RBP31.01■■■□□ 2.55
TARDBP-228ENST00000629725 NRXN3Q9Y4C0 1643 aa31■■■□□ 2.55
TARDBP-228ENST00000629725 CDK12Q9NYV4 1490 aaPredicted RBP30.98■■■□□ 2.55
TARDBP-228ENST00000629725 NHSL1Q5SYE7 1610 aa30.98■■■□□ 2.55
TARDBP-228ENST00000629725 SETD5Q9C0A6 1442 aa30.98■■■□□ 2.55
TARDBP-228ENST00000629725 SETBP1Q9Y6X0 1596 aa30.97■■■□□ 2.55
TARDBP-228ENST00000629725 AFF2P51816 1311 aa30.97■■■□□ 2.55
TARDBP-228ENST00000629725 MST1RQ04912 1400 aa30.96■■■□□ 2.55
TARDBP-228ENST00000629725 LRRC59Q96AG4 307 aaKnown RBP30.94■■■□□ 2.54
TARDBP-228ENST00000629725 SPHKAPQ2M3C7 1700 aa30.93■■■□□ 2.54
TARDBP-228ENST00000629725 ZNF326Q5BKZ1 582 aaKnown RBP30.91■■■□□ 2.54
TARDBP-228ENST00000629725 METP08581 1390 aa30.9■■■□□ 2.54
TARDBP-228ENST00000629725 ITGAEP38570 1179 aa30.87■■■□□ 2.53
TARDBP-228ENST00000629725 C8orf37Q96NL8 207 aa30.87■■■□□ 2.53
TARDBP-228ENST00000629725 ADGRL3Q9HAR2 1447 aa30.86■■■□□ 2.53
TARDBP-228ENST00000629725 SRCAPQ6ZRS2 3230 aa30.85■■■□□ 2.53
TARDBP-228ENST00000629725 DDX17Q92841 729 aaKnown RBP30.85■■■□□ 2.53
TARDBP-228ENST00000629725 NALCNQ8IZF0 1738 aa30.84■■■□□ 2.53
TARDBP-228ENST00000629725 QTRT2Q9H974 415 aaKnown RBP30.84■■■□□ 2.53
TARDBP-228ENST00000629725 PNPLA6Q8IY17 1366 aa30.83■■■□□ 2.53
TARDBP-228ENST00000629725 RBM6P78332 1123 aaKnown RBP30.82■■■□□ 2.52
TARDBP-228ENST00000629725 RGS12O14924 1447 aa30.81■■■□□ 2.52
TARDBP-228ENST00000629725 NEXMIFQ5QGS0 1516 aa30.79■■■□□ 2.52
TARDBP-228ENST00000629725 CLTCL1P53675 1640 aa30.76■■■□□ 2.52
TARDBP-228ENST00000629725 NGLY1Q96IV0 654 aa30.75■■■□□ 2.51
TARDBP-228ENST00000629725 C1orf167Q5SNV9 1468 aa30.75■■■□□ 2.51
TARDBP-228ENST00000629725 KIF1BO60333 1816 aa30.75■■■□□ 2.51
TARDBP-228ENST00000629725 ADAMTS2O95450 1211 aa30.74■■■□□ 2.51
TARDBP-228ENST00000629725 LAMC1P11047 1609 aa30.73■■■□□ 2.51
TARDBP-228ENST00000629725 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
TARDBP-228ENST00000629725 SOS2Q07890 1332 aaPredicted RBP30.67■■■□□ 2.5
TARDBP-228ENST00000629725 ORAI2Q96SN7 254 aa30.66■■■□□ 2.5
TARDBP-228ENST00000629725 USP21Q9UK80 565 aa30.65■■■□□ 2.5
TARDBP-228ENST00000629725 EP400Q96L91 3159 aa30.65■■■□□ 2.5
TARDBP-228ENST00000629725 ATAD2Q6PL18 1390 aa30.64■■■□□ 2.5
TARDBP-228ENST00000629725 ROBO2Q9HCK4 1378 aa30.64■■■□□ 2.5
TARDBP-228ENST00000629725 VGFO15240 615 aaPredicted RBP30.63■■■□□ 2.49
TARDBP-228ENST00000629725 TRPC5Q9UL62 973 aaPredicted RBP30.62■■■□□ 2.49
TARDBP-228ENST00000629725 PPARGC1BQ86YN6 1023 aaKnown RBP30.6■■■□□ 2.49
TARDBP-228ENST00000629725 FNBP4Q8N3X1 1017 aaPredicted RBP30.59■■■□□ 2.49
TARDBP-228ENST00000629725 COL22A1Q8NFW1 1626 aaPredicted RBP30.58■■■□□ 2.49
TARDBP-228ENST00000629725 PRAG1Q86YV5 1406 aa30.56■■■□□ 2.48
TARDBP-228ENST00000629725 HFM1A2PYH4 1435 aa30.56■■■□□ 2.48
TARDBP-228ENST00000629725 ATRNO75882 1429 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms