RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 NEXMIFQ5QGS0 1516 aa20.1■□□□□ 0.81
CLTCL1-212ENST00000622493 ROCK2O75116 1388 aaKnown RBP20.1■□□□□ 0.81
CLTCL1-212ENST00000622493 GPRASP1Q5JY77 1395 aa20.1■□□□□ 0.81
CLTCL1-212ENST00000622493 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
CLTCL1-212ENST00000622493 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
CLTCL1-212ENST00000622493 MYO5BQ9ULV0 1848 aa20.09■□□□□ 0.81
CLTCL1-212ENST00000622493 KIAA1210Q9ULL0 1709 aa20.08■□□□□ 0.81
CLTCL1-212ENST00000622493 CARD11Q9BXL7 1154 aa20.08■□□□□ 0.81
CLTCL1-212ENST00000622493 LAMC1P11047 1609 aa20.07■□□□□ 0.8
CLTCL1-212ENST00000622493 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
CLTCL1-212ENST00000622493 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
CLTCL1-212ENST00000622493 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
CLTCL1-212ENST00000622493 USP47Q96K76 1375 aa20.03■□□□□ 0.8
CLTCL1-212ENST00000622493 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
CLTCL1-212ENST00000622493 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
CLTCL1-212ENST00000622493 UBR1Q8IWV7 1749 aa20.02■□□□□ 0.8
CLTCL1-212ENST00000622493 ABCF1Q8NE71 845 aaKnown RBP eCLIP20■□□□□ 0.79
CLTCL1-212ENST00000622493 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
CLTCL1-212ENST00000622493 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
CLTCL1-212ENST00000622493 RIMS2Q9UQ26 1411 aa19.99■□□□□ 0.79
CLTCL1-212ENST00000622493 CFAP70Q5T0N1 1121 aa19.99■□□□□ 0.79
CLTCL1-212ENST00000622493 SETBP1Q9Y6X0 1596 aa19.98■□□□□ 0.79
CLTCL1-212ENST00000622493 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
CLTCL1-212ENST00000622493 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
CLTCL1-212ENST00000622493 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
CLTCL1-212ENST00000622493 PTPRMP28827 1452 aa19.97■□□□□ 0.79
CLTCL1-212ENST00000622493 TMEM2Q9UHN6 1383 aa19.97■□□□□ 0.79
CLTCL1-212ENST00000622493 NUTM2DQ5VT03 806 aaPredicted RBP19.96■□□□□ 0.79
CLTCL1-212ENST00000622493 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
CLTCL1-212ENST00000622493 SCAF11Q99590 1463 aaKnown RBP19.95■□□□□ 0.78
CLTCL1-212ENST00000622493 IQGAP1P46940 1657 aa19.93■□□□□ 0.78
CLTCL1-212ENST00000622493 CEP170BQ9Y4F5 1589 aaPredicted RBP19.93■□□□□ 0.78
CLTCL1-212ENST00000622493 SLIT1O75093 1534 aa19.93■□□□□ 0.78
CLTCL1-212ENST00000622493 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
CLTCL1-212ENST00000622493 ST20-MTHFSA0A0A6YYL1 179 aa19.92■□□□□ 0.78
CLTCL1-212ENST00000622493 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
CLTCL1-212ENST00000622493 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
CLTCL1-212ENST00000622493 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
CLTCL1-212ENST00000622493 ZNF142P52746 1687 aaPredicted RBP19.91■□□□□ 0.78
CLTCL1-212ENST00000622493 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
CLTCL1-212ENST00000622493 POLR1AO95602 1720 aaPredicted RBP19.89■□□□□ 0.77
CLTCL1-212ENST00000622493 ALKQ9UM73 1620 aa19.88■□□□□ 0.77
CLTCL1-212ENST00000622493 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
CLTCL1-212ENST00000622493 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
CLTCL1-212ENST00000622493 PLEKHG1Q9ULL1 1385 aa19.86■□□□□ 0.77
CLTCL1-212ENST00000622493 TXNDC2Q86VQ3 553 aa19.85■□□□□ 0.77
CLTCL1-212ENST00000622493 CCDC7Q96M83 1385 aa19.84■□□□□ 0.77
CLTCL1-212ENST00000622493 LTKP29376 864 aa19.84■□□□□ 0.77
CLTCL1-212ENST00000622493 TMEM132EQ6IEE7 984 aa19.84■□□□□ 0.77
CLTCL1-212ENST00000622493 TESK2Q96S53 571 aa19.84■□□□□ 0.77
CLTCL1-212ENST00000622493 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.77
CLTCL1-212ENST00000622493 C11orf95C9JLR9 678 aaPredicted RBP19.83■□□□□ 0.77
CLTCL1-212ENST00000622493 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
CLTCL1-212ENST00000622493 ASXL1Q8IXJ9 1541 aa19.82■□□□□ 0.76
CLTCL1-212ENST00000622493 KIF7Q2M1P5 1343 aa19.82■□□□□ 0.76
CLTCL1-212ENST00000622493 KDM4FA0A1W2PPD8 638 aa19.8■□□□□ 0.76
CLTCL1-212ENST00000622493 TMF1P82094 1093 aa19.8■□□□□ 0.76
CLTCL1-212ENST00000622493 DDX10Q13206 875 aaKnown RBP19.8■□□□□ 0.76
CLTCL1-212ENST00000622493 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
CLTCL1-212ENST00000622493 SBNO2Q9Y2G9 1366 aa19.79■□□□□ 0.76
CLTCL1-212ENST00000622493 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
CLTCL1-212ENST00000622493 BCANQ96GW7 911 aa19.79■□□□□ 0.76
CLTCL1-212ENST00000622493 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
CLTCL1-212ENST00000622493 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
CLTCL1-212ENST00000622493 ADAMTS13Q76LX8 1427 aa19.77■□□□□ 0.76
CLTCL1-212ENST00000622493 MED14O60244 1454 aa19.77■□□□□ 0.76
CLTCL1-212ENST00000622493 ARHGEF28Q8N1W1 1705 aaKnown RBP19.77■□□□□ 0.75
CLTCL1-212ENST00000622493 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
CLTCL1-212ENST00000622493 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
CLTCL1-212ENST00000622493 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
CLTCL1-212ENST00000622493 DIP2AQ14689 1571 aa19.75■□□□□ 0.75
CLTCL1-212ENST00000622493 TBX22Q9Y458 520 aa19.75■□□□□ 0.75
CLTCL1-212ENST00000622493 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
CLTCL1-212ENST00000622493 DLC1Q96QB1 1528 aa19.74■□□□□ 0.75
CLTCL1-212ENST00000622493 METP08581 1390 aa19.74■□□□□ 0.75
CLTCL1-212ENST00000622493 STK26Q9P289 416 aa19.73■□□□□ 0.75
CLTCL1-212ENST00000622493 DISP3Q9P2K9 1392 aa19.73■□□□□ 0.75
CLTCL1-212ENST00000622493 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
CLTCL1-212ENST00000622493 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
CLTCL1-212ENST00000622493 TECPR2O15040 1411 aa19.71■□□□□ 0.75
CLTCL1-212ENST00000622493 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
CLTCL1-212ENST00000622493 PIK3R4Q99570 1358 aa19.68■□□□□ 0.74
CLTCL1-212ENST00000622493 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
CLTCL1-212ENST00000622493 SLC26A8Q96RN1 970 aa19.68■□□□□ 0.74
CLTCL1-212ENST00000622493 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
CLTCL1-212ENST00000622493 PRAM1Q96QH2 718 aa19.68■□□□□ 0.74
CLTCL1-212ENST00000622493 POGKQ9P215 609 aa19.68■□□□□ 0.74
CLTCL1-212ENST00000622493 FAM135BQ49AJ0 1406 aa19.67■□□□□ 0.74
CLTCL1-212ENST00000622493 PUS7Q96PZ0 661 aaKnown RBP19.67■□□□□ 0.74
CLTCL1-212ENST00000622493 CPS1P31327 1500 aa19.66■□□□□ 0.74
CLTCL1-212ENST00000622493 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
CLTCL1-212ENST00000622493 EVC2Q86UK5 1308 aa19.64■□□□□ 0.73
CLTCL1-212ENST00000622493 PTPRUQ92729 1446 aa19.62■□□□□ 0.73
CLTCL1-212ENST00000622493 MIER1Q8N108 512 aa19.61■□□□□ 0.73
CLTCL1-212ENST00000622493 AMOTL2Q9Y2J4 779 aa19.61■□□□□ 0.73
CLTCL1-212ENST00000622493 LMTK3Q96Q04 1460 aa19.61■□□□□ 0.73
CLTCL1-212ENST00000622493 PTCH1Q13635 1447 aa19.6■□□□□ 0.73
CLTCL1-212ENST00000622493 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.731e-12■■■□□ 15
CLTCL1-212ENST00000622493 WAPLQ7Z5K2 1190 aa19.6■□□□□ 0.73
CLTCL1-212ENST00000622493 NCKAP5LQ9HCH0 1330 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms