RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	BCAN	Q96GW7	911 aa		13.55	□□□□□ -0.24
TARDBP-222	ENST00000620505	SLC26A8	Q96RN1	970 aa		13.55	□□□□□ -0.24
TARDBP-222	ENST00000620505	ADGRL2	O95490	1459 aa		13.55	□□□□□ -0.24
TARDBP-222	ENST00000620505	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.54	□□□□□ -0.24
TARDBP-222	ENST00000620505	NOS1	P29475	1434 aa		13.53	□□□□□ -0.24
TARDBP-222	ENST00000620505	ANKRD50	Q9ULJ7	1429 aa		13.53	□□□□□ -0.24
TARDBP-222	ENST00000620505	ITGAE	P38570	1179 aa		13.52	□□□□□ -0.25
TARDBP-222	ENST00000620505	XIRP1	Q702N8	1843 aa	Known RBP	13.5	□□□□□ -0.25
TARDBP-222	ENST00000620505	ADGRB3	O60242	1522 aa		13.5	□□□□□ -0.25
TARDBP-222	ENST00000620505	TMEM94	Q12767	1356 aa		13.5	□□□□□ -0.25
TARDBP-222	ENST00000620505	CHGA	P10645	457 aa	Known RBP	13.5	□□□□□ -0.25
TARDBP-222	ENST00000620505	PROSER2	Q86WR7	435 aa	Predicted RBP	13.5	□□□□□ -0.25
TARDBP-222	ENST00000620505	KCNA6	P17658	529 aa		13.49	□□□□□ -0.25
TARDBP-222	ENST00000620505	SLC52A1	Q9NWF4	448 aa		13.49	□□□□□ -0.25
TARDBP-222	ENST00000620505	TET3	O43151	1660 aa		13.48	□□□□□ -0.25
TARDBP-222	ENST00000620505	KDM5A	P29375	1690 aa	Known RBP	13.48	□□□□□ -0.25
TARDBP-222	ENST00000620505	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.48	□□□□□ -0.25
TARDBP-222	ENST00000620505	PPP1R15A	O75807	674 aa	Predicted RBP	13.47	□□□□□ -0.25
TARDBP-222	ENST00000620505	RIMS2	Q9UQ26	1411 aa		13.46	□□□□□ -0.26
TARDBP-222	ENST00000620505	GCC2	Q8IWJ2	1684 aa		13.45	□□□□□ -0.26
TARDBP-222	ENST00000620505	RPRD2	Q5VT52	1461 aa	Known RBP	13.45	□□□□□ -0.26
TARDBP-222	ENST00000620505	MYO5B	Q9ULV0	1848 aa		13.45	□□□□□ -0.26
TARDBP-222	ENST00000620505	ZFYVE9	O95405	1425 aa		13.44	□□□□□ -0.26
TARDBP-222	ENST00000620505	UNC13B	O14795	1591 aa		13.44	□□□□□ -0.26
TARDBP-222	ENST00000620505	TMEM131L	A2VDJ0	1609 aa		13.42	□□□□□ -0.26
TARDBP-222	ENST00000620505	FAM135B	Q49AJ0	1406 aa		13.42	□□□□□ -0.26
TARDBP-222	ENST00000620505		E9PCH4	1651 aa		13.42	□□□□□ -0.26
TARDBP-222	ENST00000620505	NUP155	O75694	1391 aa		13.42	□□□□□ -0.26
TARDBP-222	ENST00000620505	PLEKHG1	Q9ULL1	1385 aa		13.42	□□□□□ -0.26
TARDBP-222	ENST00000620505	NWD1	Q149M9	1564 aa		13.41	□□□□□ -0.26
TARDBP-222	ENST00000620505	HDGF	P51858	240 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-222	ENST00000620505	ROCK1	Q13464	1354 aa		13.41	□□□□□ -0.26
TARDBP-222	ENST00000620505	NKTR	P30414	1462 aa	Known RBP	13.41	□□□□□ -0.26
TARDBP-222	ENST00000620505	ROBO1	Q9Y6N7	1651 aa		13.4	□□□□□ -0.26
TARDBP-222	ENST00000620505	RGS17	Q9UGC6	210 aa	Predicted RBP	13.4	□□□□□ -0.26
TARDBP-222	ENST00000620505	MSH6	P52701	1360 aa		13.4	□□□□□ -0.26
TARDBP-222	ENST00000620505	C14orf37	Q86TY3	774 aa		13.39	□□□□□ -0.27
TARDBP-222	ENST00000620505	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
TARDBP-222	ENST00000620505	IQGAP3	Q86VI3	1631 aa		13.39	□□□□□ -0.27
TARDBP-222	ENST00000620505	SLAIN2	Q9P270	581 aa		13.37	□□□□□ -0.27
TARDBP-222	ENST00000620505	TBX22	Q9Y458	520 aa		13.37	□□□□□ -0.27
TARDBP-222	ENST00000620505	CHD2	O14647	1828 aa	Known RBP	13.36	□□□□□ -0.27
TARDBP-222	ENST00000620505	ADAMTS13	Q76LX8	1427 aa		13.36	□□□□□ -0.27
TARDBP-222	ENST00000620505	ZNF326	Q5BKZ1	582 aa	Known RBP	13.34	□□□□□ -0.27
TARDBP-222	ENST00000620505	POTEA	Q6S8J7	498 aa		13.34	□□□□□ -0.27
TARDBP-222	ENST00000620505	PHLPP1	O60346	1717 aa		13.33	□□□□□ -0.27
TARDBP-222	ENST00000620505	AMOTL2	Q9Y2J4	779 aa		13.33	□□□□□ -0.28
TARDBP-222	ENST00000620505	PTPRU	Q92729	1446 aa		13.32	□□□□□ -0.28
TARDBP-222	ENST00000620505	ATF3	P18847	181 aa		13.31	□□□□□ -0.28
TARDBP-222	ENST00000620505	DIP2A	Q14689	1571 aa		13.3	□□□□□ -0.28
TARDBP-222	ENST00000620505	JCAD	Q9P266	1359 aa		13.3	□□□□□ -0.28
TARDBP-222	ENST00000620505	TRPM2	O94759	1503 aa		13.29	□□□□□ -0.28
TARDBP-222	ENST00000620505	C19orf44	Q9H6X5	657 aa		13.29	□□□□□ -0.28
TARDBP-222	ENST00000620505	SPHKAP	Q2M3C7	1700 aa		13.29	□□□□□ -0.28
TARDBP-222	ENST00000620505	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.29	□□□□□ -0.28
TARDBP-222	ENST00000620505	PIK3R4	Q99570	1358 aa		13.29	□□□□□ -0.28
TARDBP-222	ENST00000620505	CADPS2	Q86UW7	1296 aa		13.28	□□□□□ -0.28
TARDBP-222	ENST00000620505	NCOA3	Q9Y6Q9	1424 aa		13.28	□□□□□ -0.28
TARDBP-222	ENST00000620505	COL16A1	Q07092	1604 aa	Predicted RBP	13.28	□□□□□ -0.28
TARDBP-222	ENST00000620505	TRIM52	Q96A61	297 aa		13.27	□□□□□ -0.29
TARDBP-222	ENST00000620505	NRXN3	Q9Y4C0	1643 aa		13.27	□□□□□ -0.29
TARDBP-222	ENST00000620505	MET	P08581	1390 aa		13.26	□□□□□ -0.29
TARDBP-222	ENST00000620505	CLTCL1	P53675	1640 aa		13.26	□□□□□ -0.29
TARDBP-222	ENST00000620505	NAIP	Q13075	1403 aa		13.25	□□□□□ -0.29
TARDBP-222	ENST00000620505	RRBP1	Q9P2E9	1410 aa	Known RBP	13.25	□□□□□ -0.29
TARDBP-222	ENST00000620505	MEX3C	Q5U5Q3	659 aa	Known RBP	13.25	□□□□□ -0.29
TARDBP-222	ENST00000620505	BRINP3	Q76B58	766 aa		13.25	□□□□□ -0.29
TARDBP-222	ENST00000620505	LRP6	O75581	1613 aa		13.24	□□□□□ -0.29
TARDBP-222	ENST00000620505	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.24	□□□□□ -0.29
TARDBP-222	ENST00000620505	NUTM2E	B1AL46	878 aa	Predicted RBP	13.24	□□□□□ -0.29
TARDBP-222	ENST00000620505	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.24	□□□□□ -0.29
TARDBP-222	ENST00000620505	SETBP1	Q9Y6X0	1596 aa		13.24	□□□□□ -0.29
TARDBP-222	ENST00000620505	XRN1	Q8IZH2	1706 aa	Known RBP	13.23	□□□□□ -0.29
TARDBP-222	ENST00000620505	NEXMIF	Q5QGS0	1516 aa		13.23	□□□□□ -0.29
TARDBP-222	ENST00000620505	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.22	□□□□□ -0.29
TARDBP-222	ENST00000620505	DSG3	P32926	999 aa		13.22	□□□□□ -0.29
TARDBP-222	ENST00000620505	NCBP3	Q53F19	620 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-222	ENST00000620505	DDX17	Q92841	729 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-222	ENST00000620505	SETD1A	O15047	1707 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-222	ENST00000620505	SPATA31A6	Q5VVP1	1343 aa		13.21	□□□□□ -0.29
TARDBP-222	ENST00000620505	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.2	□□□□□ -0.3
TARDBP-222	ENST00000620505	MST1R	Q04912	1400 aa		13.2	□□□□□ -0.3
TARDBP-222	ENST00000620505	ASXL1	Q8IXJ9	1541 aa		13.19	□□□□□ -0.3
TARDBP-222	ENST00000620505	KIF1B	O60333	1816 aa		13.19	□□□□□ -0.3
TARDBP-222	ENST00000620505	DCC	P43146	1447 aa		13.18	□□□□□ -0.3
TARDBP-222	ENST00000620505	SHPRH	Q149N8	1683 aa		13.18	□□□□□ -0.3
TARDBP-222	ENST00000620505	NALCN	Q8IZF0	1738 aa		13.17	□□□□□ -0.3
TARDBP-222	ENST00000620505	ADGRL3	Q9HAR2	1447 aa		13.17	□□□□□ -0.3
TARDBP-222	ENST00000620505	HFM1	A2PYH4	1435 aa		13.16	□□□□□ -0.3
TARDBP-222	ENST00000620505	VGF	O15240	615 aa	Predicted RBP	13.16	□□□□□ -0.3
TARDBP-222	ENST00000620505	ZNF772	Q68DY9	489 aa	Predicted RBP	13.16	□□□□□ -0.3
TARDBP-222	ENST00000620505	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.15	□□□□□ -0.3
TARDBP-222	ENST00000620505		U3KPZ7	1027 aa	Predicted RBP	13.15	□□□□□ -0.3
TARDBP-222	ENST00000620505	ROBO2	Q9HCK4	1378 aa		13.15	□□□□□ -0.3
TARDBP-222	ENST00000620505	NHSL1	Q5SYE7	1610 aa		13.14	□□□□□ -0.31
TARDBP-222	ENST00000620505	LRRC59	Q96AG4	307 aa	Known RBP	13.14	□□□□□ -0.31
TARDBP-222	ENST00000620505	AFF2	P51816	1311 aa		13.13	□□□□□ -0.31
TARDBP-222	ENST00000620505	SETD5	Q9C0A6	1442 aa		13.13	□□□□□ -0.31
TARDBP-222	ENST00000620505	CAPN15	O75808	1086 aa		13.13	□□□□□ -0.31
TARDBP-222	ENST00000620505	RGL3	Q3MIN7	710 aa		13.13	□□□□□ -0.31

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