RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 NAIPQ13075 1403 aa16.57■□□□□ 0.24
GAPDH-211ENST00000619601 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
GAPDH-211ENST00000619601 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
GAPDH-211ENST00000619601 HFM1A2PYH4 1435 aa16.55■□□□□ 0.24
GAPDH-211ENST00000619601 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.24
GAPDH-211ENST00000619601 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
GAPDH-211ENST00000619601 MYO5BQ9ULV0 1848 aa16.51■□□□□ 0.23
GAPDH-211ENST00000619601 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
GAPDH-211ENST00000619601 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
GAPDH-211ENST00000619601 SLC26A8Q96RN1 970 aa16.49■□□□□ 0.23
GAPDH-211ENST00000619601 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
GAPDH-211ENST00000619601 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
GAPDH-211ENST00000619601 PPP1R15AO75807 674 aaPredicted RBP16.48■□□□□ 0.23
GAPDH-211ENST00000619601 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
GAPDH-211ENST00000619601 KCNA6P17658 529 aa16.47■□□□□ 0.23
GAPDH-211ENST00000619601 BCANQ96GW7 911 aa16.47■□□□□ 0.23
GAPDH-211ENST00000619601 TMEM94Q12767 1356 aa16.47■□□□□ 0.23
GAPDH-211ENST00000619601 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
GAPDH-211ENST00000619601 ACIN1Q9UKV3 1341 aaKnown RBP16.46■□□□□ 0.23
GAPDH-211ENST00000619601 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
GAPDH-211ENST00000619601 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
GAPDH-211ENST00000619601 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
GAPDH-211ENST00000619601 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
GAPDH-211ENST00000619601 FAM135BQ49AJ0 1406 aa16.44■□□□□ 0.22
GAPDH-211ENST00000619601 TRPM2O94759 1503 aa16.43■□□□□ 0.22
GAPDH-211ENST00000619601 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
GAPDH-211ENST00000619601 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
GAPDH-211ENST00000619601 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
GAPDH-211ENST00000619601 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
GAPDH-211ENST00000619601 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
GAPDH-211ENST00000619601 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
GAPDH-211ENST00000619601 CLTCL1P53675 1640 aa16.39■□□□□ 0.21
GAPDH-211ENST00000619601 KIF1BO60333 1816 aa16.38■□□□□ 0.21
GAPDH-211ENST00000619601 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
GAPDH-211ENST00000619601 RGS17Q9UGC6 210 aaPredicted RBP16.38■□□□□ 0.21
GAPDH-211ENST00000619601 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
GAPDH-211ENST00000619601 MSH6P52701 1360 aa16.36■□□□□ 0.21
GAPDH-211ENST00000619601 NUTM2DQ5VT03 806 aaPredicted RBP16.35■□□□□ 0.21
GAPDH-211ENST00000619601 ADAMTS13Q76LX8 1427 aa16.35■□□□□ 0.21
GAPDH-211ENST00000619601 SETD5Q9C0A6 1442 aa16.34■□□□□ 0.21
GAPDH-211ENST00000619601 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
GAPDH-211ENST00000619601 PHLPP1O60346 1717 aa16.33■□□□□ 0.21
GAPDH-211ENST00000619601 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
GAPDH-211ENST00000619601 NCOA3Q9Y6Q9 1424 aa16.33■□□□□ 0.2
GAPDH-211ENST00000619601 NEXMIFQ5QGS0 1516 aa16.32■□□□□ 0.2
GAPDH-211ENST00000619601 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
GAPDH-211ENST00000619601 MPHOSPH9Q99550 1183 aa16.32■□□□□ 0.2
GAPDH-211ENST00000619601 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
GAPDH-211ENST00000619601 CCDC144AA2RUR9 1427 aa16.29■□□□□ 0.2
GAPDH-211ENST00000619601 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.29■□□□□ 0.2
GAPDH-211ENST00000619601 NRXN3Q9Y4C0 1643 aa16.29■□□□□ 0.2
GAPDH-211ENST00000619601 POTEAQ6S8J7 498 aa16.28■□□□□ 0.2
GAPDH-211ENST00000619601 C14orf37Q86TY3 774 aa16.27■□□□□ 0.2
GAPDH-211ENST00000619601 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
GAPDH-211ENST00000619601 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.19
GAPDH-211ENST00000619601 FOXD1Q16676 465 aa16.26■□□□□ 0.19
GAPDH-211ENST00000619601 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
GAPDH-211ENST00000619601 JCADQ9P266 1359 aa16.26■□□□□ 0.19
GAPDH-211ENST00000619601 PTPRUQ92729 1446 aa16.25■□□□□ 0.19
GAPDH-211ENST00000619601 C19orf44Q9H6X5 657 aa16.24■□□□□ 0.19
GAPDH-211ENST00000619601 XRN1Q8IZH2 1706 aaKnown RBP16.24■□□□□ 0.19
GAPDH-211ENST00000619601 PPLO60437 1756 aa16.23■□□□□ 0.19
GAPDH-211ENST00000619601 HRCP23327 699 aa16.23■□□□□ 0.19
GAPDH-211ENST00000619601 ATF3P18847 181 aa16.22■□□□□ 0.19
GAPDH-211ENST00000619601 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
GAPDH-211ENST00000619601 METP08581 1390 aa16.22■□□□□ 0.19
GAPDH-211ENST00000619601 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
GAPDH-211ENST00000619601 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
GAPDH-211ENST00000619601 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
GAPDH-211ENST00000619601 DCCP43146 1447 aa16.19■□□□□ 0.18
GAPDH-211ENST00000619601 SHPRHQ149N8 1683 aa16.19■□□□□ 0.18
GAPDH-211ENST00000619601 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
GAPDH-211ENST00000619601 LRP6O75581 1613 aa16.19■□□□□ 0.18
GAPDH-211ENST00000619601 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
GAPDH-211ENST00000619601 SPATA31A6Q5VVP1 1343 aa16.17■□□□□ 0.18
GAPDH-211ENST00000619601 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
GAPDH-211ENST00000619601 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
GAPDH-211ENST00000619601 PTCH1Q13635 1447 aa16.16■□□□□ 0.18
GAPDH-211ENST00000619601 PRAG1Q86YV5 1406 aa16.16■□□□□ 0.18
GAPDH-211ENST00000619601 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.17
GAPDH-211ENST00000619601 ADGRL3Q9HAR2 1447 aa16.13■□□□□ 0.17
GAPDH-211ENST00000619601 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
GAPDH-211ENST00000619601 MEX3CQ5U5Q3 659 aaKnown RBP16.13■□□□□ 0.17
GAPDH-211ENST00000619601 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
GAPDH-211ENST00000619601 MST1RQ04912 1400 aa16.12■□□□□ 0.17
GAPDH-211ENST00000619601 NALCNQ8IZF0 1738 aa16.12■□□□□ 0.17
GAPDH-211ENST00000619601 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
GAPDH-211ENST00000619601 MYOM2P54296 1465 aa16.1■□□□□ 0.17
GAPDH-211ENST00000619601 NUTM2BA6NNL0 878 aaPredicted RBP16.09■□□□□ 0.17
GAPDH-211ENST00000619601 NUTM2EB1AL46 878 aaPredicted RBP16.09■□□□□ 0.17
GAPDH-211ENST00000619601 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
GAPDH-211ENST00000619601 NUTM2AQ8IVF1 878 aaPredicted RBP16.09■□□□□ 0.17
GAPDH-211ENST00000619601 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
GAPDH-211ENST00000619601 LAMC1P11047 1609 aa16.08■□□□□ 0.16
GAPDH-211ENST00000619601 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
GAPDH-211ENST00000619601 LRPPRCP42704 1394 aaKnown RBP16.07■□□□□ 0.16
GAPDH-211ENST00000619601 TECPR2O15040 1411 aa16.07■□□□□ 0.16
GAPDH-211ENST00000619601 NRXN1Q9ULB1 1477 aa16.07■□□□□ 0.16
GAPDH-211ENST00000619601 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
GAPDH-211ENST00000619601 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms