RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
TMCO3-209ENST00000619336 FGD6Q6ZV73 1430 aa22.93■■□□□ 1.26
TMCO3-209ENST00000619336 MYO5BQ9ULV0 1848 aa22.92■■□□□ 1.26
TMCO3-209ENST00000619336 SLAIN2Q9P270 581 aa22.9■■□□□ 1.26
TMCO3-209ENST00000619336 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.26
TMCO3-209ENST00000619336 JCADQ9P266 1359 aa22.89■■□□□ 1.25
TMCO3-209ENST00000619336 GCC2Q8IWJ2 1684 aa22.88■■□□□ 1.25
TMCO3-209ENST00000619336 SLC52A1Q9NWF4 448 aa22.88■■□□□ 1.25
TMCO3-209ENST00000619336 COL16A1Q07092 1604 aaPredicted RBP22.87■■□□□ 1.25
TMCO3-209ENST00000619336 ZFYVE9O95405 1425 aa22.87■■□□□ 1.25
TMCO3-209ENST00000619336 APLP2Q06481 763 aa22.86■■□□□ 1.25
TMCO3-209ENST00000619336 PLEKHG1Q9ULL1 1385 aa22.86■■□□□ 1.25
TMCO3-209ENST00000619336 RIMS2Q9UQ26 1411 aa22.84■■□□□ 1.25
TMCO3-209ENST00000619336 PPP1R15AO75807 674 aaPredicted RBP22.84■■□□□ 1.25
TMCO3-209ENST00000619336 ADGRL2O95490 1459 aa22.83■■□□□ 1.25
TMCO3-209ENST00000619336 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.25
TMCO3-209ENST00000619336 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
TMCO3-209ENST00000619336 LRP6O75581 1613 aa22.82■■□□□ 1.24
TMCO3-209ENST00000619336 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
TMCO3-209ENST00000619336 ANKRD50Q9ULJ7 1429 aa22.78■■□□□ 1.24
TMCO3-209ENST00000619336 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.77■■□□□ 1.24
TMCO3-209ENST00000619336 MEX3CQ5U5Q3 659 aaKnown RBP22.77■■□□□ 1.24
TMCO3-209ENST00000619336 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
TMCO3-209ENST00000619336 TBX22Q9Y458 520 aa22.76■■□□□ 1.23
TMCO3-209ENST00000619336 SPATA31A6Q5VVP1 1343 aa22.76■■□□□ 1.23
TMCO3-209ENST00000619336 NCOA3Q9Y6Q9 1424 aa22.75■■□□□ 1.23
TMCO3-209ENST00000619336 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
TMCO3-209ENST00000619336 NUTM2DQ5VT03 806 aaPredicted RBP22.75■■□□□ 1.23
TMCO3-209ENST00000619336 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
TMCO3-209ENST00000619336 SHPRHQ149N8 1683 aa22.74■■□□□ 1.23
TMCO3-209ENST00000619336 FAM50AQ14320 339 aaKnown RBP22.74■■□□□ 1.23
TMCO3-209ENST00000619336 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
TMCO3-209ENST00000619336 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
TMCO3-209ENST00000619336 DIP2AQ14689 1571 aa22.72■■□□□ 1.23
TMCO3-209ENST00000619336 E9PCH4 1651 aa22.71■■□□□ 1.23
TMCO3-209ENST00000619336 ZNF772Q68DY9 489 aaPredicted RBP22.71■■□□□ 1.23
TMCO3-209ENST00000619336 CADPS2Q86UW7 1296 aa22.71■■□□□ 1.23
TMCO3-209ENST00000619336 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.71■■□□□ 1.23
TMCO3-209ENST00000619336 UPF1Q92900 1129 aaKnown RBP eCLIP22.71■■□□□ 1.23
TMCO3-209ENST00000619336 UNC13BO14795 1591 aa22.71■■□□□ 1.23
TMCO3-209ENST00000619336 ATF3P18847 181 aa22.7■■□□□ 1.22
TMCO3-209ENST00000619336 C19orf44Q9H6X5 657 aa22.69■■□□□ 1.22
TMCO3-209ENST00000619336 TRPM2O94759 1503 aa22.67■■□□□ 1.22
TMCO3-209ENST00000619336 PIK3R4Q99570 1358 aa22.66■■□□□ 1.22
TMCO3-209ENST00000619336 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
TMCO3-209ENST00000619336 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
TMCO3-209ENST00000619336 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
TMCO3-209ENST00000619336 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
TMCO3-209ENST00000619336 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
TMCO3-209ENST00000619336 RXRBP28702 533 aa22.63■■□□□ 1.21
TMCO3-209ENST00000619336 AMOTL2Q9Y2J4 779 aa22.63■■□□□ 1.21
TMCO3-209ENST00000619336 IQGAP3Q86VI3 1631 aa22.62■■□□□ 1.21
TMCO3-209ENST00000619336 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
TMCO3-209ENST00000619336 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
TMCO3-209ENST00000619336 AFF2P51816 1311 aa22.58■■□□□ 1.21
TMCO3-209ENST00000619336 DCCP43146 1447 aa22.58■■□□□ 1.21
TMCO3-209ENST00000619336 NRXN3Q9Y4C0 1643 aa22.58■■□□□ 1.21
TMCO3-209ENST00000619336 CDK12Q9NYV4 1490 aaPredicted RBP22.58■■□□□ 1.2
TMCO3-209ENST00000619336 NHSL1Q5SYE7 1610 aa22.57■■□□□ 1.2
TMCO3-209ENST00000619336 MST1RQ04912 1400 aa22.56■■□□□ 1.2
TMCO3-209ENST00000619336 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
TMCO3-209ENST00000619336 SETBP1Q9Y6X0 1596 aa22.54■■□□□ 1.2
TMCO3-209ENST00000619336 NUP155O75694 1391 aa22.52■■□□□ 1.2
TMCO3-209ENST00000619336 ROCK1Q13464 1354 aa22.51■■□□□ 1.19
TMCO3-209ENST00000619336 DDX17Q92841 729 aaKnown RBP22.51■■□□□ 1.19
TMCO3-209ENST00000619336 RGS12O14924 1447 aa22.5■■□□□ 1.19
TMCO3-209ENST00000619336 C8orf37Q96NL8 207 aa22.5■■□□□ 1.19
TMCO3-209ENST00000619336 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
TMCO3-209ENST00000619336 METP08581 1390 aa22.5■■□□□ 1.19
TMCO3-209ENST00000619336 NALCNQ8IZF0 1738 aa22.49■■□□□ 1.19
TMCO3-209ENST00000619336 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
TMCO3-209ENST00000619336 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
TMCO3-209ENST00000619336 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
TMCO3-209ENST00000619336 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
TMCO3-209ENST00000619336 QTRT2Q9H974 415 aaKnown RBP22.46■■□□□ 1.19
TMCO3-209ENST00000619336 RBM6P78332 1123 aaKnown RBP22.44■■□□□ 1.18
TMCO3-209ENST00000619336 ITGAEP38570 1179 aa22.43■■□□□ 1.18
TMCO3-209ENST00000619336 ADAMTS2O95450 1211 aa22.41■■□□□ 1.18
TMCO3-209ENST00000619336 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
TMCO3-209ENST00000619336 SRCAPQ6ZRS2 3230 aa22.4■■□□□ 1.18
TMCO3-209ENST00000619336 CLTCL1P53675 1640 aa22.39■■□□□ 1.18
TMCO3-209ENST00000619336 NGLY1Q96IV0 654 aa22.39■■□□□ 1.17
TMCO3-209ENST00000619336 C1orf167Q5SNV9 1468 aa22.38■■□□□ 1.17
TMCO3-209ENST00000619336 LAMC1P11047 1609 aa22.36■■□□□ 1.17
TMCO3-209ENST00000619336 KIF1BO60333 1816 aa22.34■■□□□ 1.17
TMCO3-209ENST00000619336 ORAI2Q96SN7 254 aa22.33■■□□□ 1.17
TMCO3-209ENST00000619336 ATAD2Q6PL18 1390 aa22.33■■□□□ 1.17
TMCO3-209ENST00000619336 USP21Q9UK80 565 aa22.32■■□□□ 1.16
TMCO3-209ENST00000619336 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
TMCO3-209ENST00000619336 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
TMCO3-209ENST00000619336 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
TMCO3-209ENST00000619336 TRPC5Q9UL62 973 aaPredicted RBP22.28■■□□□ 1.16
TMCO3-209ENST00000619336 COL22A1Q8NFW1 1626 aaPredicted RBP22.27■■□□□ 1.16
TMCO3-209ENST00000619336 EP400Q96L91 3159 aa22.26■■□□□ 1.15
TMCO3-209ENST00000619336 ATRNO75882 1429 aa22.26■■□□□ 1.15
TMCO3-209ENST00000619336 PPARGC1BQ86YN6 1023 aaKnown RBP22.25■■□□□ 1.15
TMCO3-209ENST00000619336 FNBP4Q8N3X1 1017 aaPredicted RBP22.25■■□□□ 1.15
TMCO3-209ENST00000619336 PRAG1Q86YV5 1406 aa22.22■■□□□ 1.15
TMCO3-209ENST00000619336 MYOM2P54296 1465 aa22.22■■□□□ 1.15
TMCO3-209ENST00000619336 MARF1Q9Y4F3 1742 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms