RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 MROH1Q8NDA8 1641 aa11.02□□□□□ -0.64
RPRD1B-208ENST00000618318 E9PCH4 1651 aa11.02□□□□□ -0.64
RPRD1B-208ENST00000618318 ABCC3O15438 1527 aa11.02□□□□□ -0.65
RPRD1B-208ENST00000618318 CHGAP10645 457 aaKnown RBP11.01□□□□□ -0.65
RPRD1B-208ENST00000618318 NPATQ14207 1427 aa11.01□□□□□ -0.65
RPRD1B-208ENST00000618318 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
RPRD1B-208ENST00000618318 NEURL4Q96JN8 1562 aa11□□□□□ -0.65
RPRD1B-208ENST00000618318 SLC24A1O60721 1099 aa11□□□□□ -0.65
RPRD1B-208ENST00000618318 ROCK2O75116 1388 aaKnown RBP11□□□□□ -0.65
RPRD1B-208ENST00000618318 ZC3H13Q5T200 1668 aaKnown RBP10.99□□□□□ -0.65
RPRD1B-208ENST00000618318 SPHKAPQ2M3C7 1700 aa10.99□□□□□ -0.65
RPRD1B-208ENST00000618318 NOS1P29475 1434 aa10.99□□□□□ -0.65
RPRD1B-208ENST00000618318 PRAG1Q86YV5 1406 aa10.99□□□□□ -0.65
RPRD1B-208ENST00000618318 RALGAPBQ86X10 1494 aa10.99□□□□□ -0.65
RPRD1B-208ENST00000618318 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
RPRD1B-208ENST00000618318 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
RPRD1B-208ENST00000618318 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
RPRD1B-208ENST00000618318 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
RPRD1B-208ENST00000618318 VGFO15240 615 aaPredicted RBP10.97□□□□□ -0.65
RPRD1B-208ENST00000618318 CAPN15O75808 1086 aa10.97□□□□□ -0.65
RPRD1B-208ENST00000618318 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
RPRD1B-208ENST00000618318 CAMSAP1Q5T5Y3 1602 aa10.97□□□□□ -0.65
RPRD1B-208ENST00000618318 CEP152O94986 1710 aa10.96□□□□□ -0.65
RPRD1B-208ENST00000618318 USP47Q96K76 1375 aa10.96□□□□□ -0.65
RPRD1B-208ENST00000618318 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.65
RPRD1B-208ENST00000618318 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.65
RPRD1B-208ENST00000618318 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
RPRD1B-208ENST00000618318 IDI1Q13907 227 aa10.95□□□□□ -0.66
RPRD1B-208ENST00000618318 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
RPRD1B-208ENST00000618318 GPRASP1Q5JY77 1395 aa10.94□□□□□ -0.66
RPRD1B-208ENST00000618318 ANP32CO43423 234 aa10.94□□□□□ -0.66
RPRD1B-208ENST00000618318 MED1Q15648 1581 aaPredicted RBP10.94□□□□□ -0.66
RPRD1B-208ENST00000618318 ZMYM3Q14202 1370 aa10.93□□□□□ -0.66
RPRD1B-208ENST00000618318 KIF1BO60333 1816 aa10.93□□□□□ -0.66
RPRD1B-208ENST00000618318 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
RPRD1B-208ENST00000618318 MIER1Q8N108 512 aa10.92□□□□□ -0.66
RPRD1B-208ENST00000618318 MYOM2P54296 1465 aa10.92□□□□□ -0.66
RPRD1B-208ENST00000618318 ST20-MTHFSA0A0A6YYL1 179 aa10.91□□□□□ -0.66
RPRD1B-208ENST00000618318 KCNA4P22459 653 aa10.91□□□□□ -0.66
RPRD1B-208ENST00000618318 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
RPRD1B-208ENST00000618318 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
RPRD1B-208ENST00000618318 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 CCDC7Q96M83 1385 aa10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 WASHC2AQ641Q2 1341 aa10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 CLTCQ00610 1675 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 ERVK-7P63135 1459 aa10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 TMF1P82094 1093 aa10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 C14orf93Q9H972 538 aaKnown RBP10.9□□□□□ -0.66
RPRD1B-208ENST00000618318 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.67
RPRD1B-208ENST00000618318 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
RPRD1B-208ENST00000618318 ZNF335Q9H4Z2 1342 aaPredicted RBP10.89□□□□□ -0.67
RPRD1B-208ENST00000618318 ADGRB3O60242 1522 aa10.89□□□□□ -0.67
RPRD1B-208ENST00000618318 UBAP1LF5GYI3 381 aa10.88□□□□□ -0.67
RPRD1B-208ENST00000618318 ZFYVE9O95405 1425 aa10.88□□□□□ -0.67
RPRD1B-208ENST00000618318 CFAP70Q5T0N1 1121 aa10.88□□□□□ -0.67
RPRD1B-208ENST00000618318 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
RPRD1B-208ENST00000618318 LAMC1P11047 1609 aa10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 TRPM1Q7Z4N2 1603 aa10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 KIF7Q2M1P5 1343 aa10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 UGGT1Q9NYU2 1555 aa10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 POLR3GLQ9BT43 218 aa10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 SCAF11Q99590 1463 aaKnown RBP10.87□□□□□ -0.67
RPRD1B-208ENST00000618318 TNRQ92752 1358 aa10.86□□□□□ -0.67
RPRD1B-208ENST00000618318 NRXN1Q9ULB1 1477 aa10.86□□□□□ -0.67
RPRD1B-208ENST00000618318 SYNMO15061 1565 aa10.86□□□□□ -0.67
RPRD1B-208ENST00000618318 PIK3C2BO00750 1634 aa10.85□□□□□ -0.67
RPRD1B-208ENST00000618318 C11orf95C9JLR9 678 aaPredicted RBP10.85□□□□□ -0.67
RPRD1B-208ENST00000618318 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
RPRD1B-208ENST00000618318 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
RPRD1B-208ENST00000618318 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
RPRD1B-208ENST00000618318 PIK3C2GO75747 1445 aa10.83□□□□□ -0.68
RPRD1B-208ENST00000618318 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
RPRD1B-208ENST00000618318 DSG3P32926 999 aa10.82□□□□□ -0.68
RPRD1B-208ENST00000618318 TESK2Q96S53 571 aa10.82□□□□□ -0.68
RPRD1B-208ENST00000618318 ALKQ9UM73 1620 aa10.82□□□□□ -0.68
RPRD1B-208ENST00000618318 CPS1P31327 1500 aa10.82□□□□□ -0.68
RPRD1B-208ENST00000618318 NUTM2DQ5VT03 806 aaPredicted RBP10.81□□□□□ -0.68
RPRD1B-208ENST00000618318 THEMISQ8N1K5 641 aaPredicted RBP10.81□□□□□ -0.68
RPRD1B-208ENST00000618318 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
RPRD1B-208ENST00000618318 SETBP1Q9Y6X0 1596 aa10.81□□□□□ -0.68
RPRD1B-208ENST00000618318 NLRP1Q9C000 1473 aa10.81□□□□□ -0.68
RPRD1B-208ENST00000618318 HSPA1LP34931 641 aa10.8□□□□□ -0.68
RPRD1B-208ENST00000618318 RIMS2Q9UQ26 1411 aa10.8□□□□□ -0.68
RPRD1B-208ENST00000618318 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
RPRD1B-208ENST00000618318 A2ML1A8K2U0 1454 aa10.8□□□□□ -0.68
RPRD1B-208ENST00000618318 TMEM131LA2VDJ0 1609 aa10.8□□□□□ -0.68
RPRD1B-208ENST00000618318 NEXMIFQ5QGS0 1516 aa10.79□□□□□ -0.68
RPRD1B-208ENST00000618318 BCANQ96GW7 911 aa10.79□□□□□ -0.68
RPRD1B-208ENST00000618318 PUS7Q96PZ0 661 aaKnown RBP10.79□□□□□ -0.68
RPRD1B-208ENST00000618318 TRAK1Q9UPV9 953 aa10.79□□□□□ -0.68
RPRD1B-208ENST00000618318 PPLO60437 1756 aa10.79□□□□□ -0.68
RPRD1B-208ENST00000618318 IFT172Q9UG01 1749 aa10.78□□□□□ -0.68
RPRD1B-208ENST00000618318 TMEM132EQ6IEE7 984 aa10.78□□□□□ -0.68
RPRD1B-208ENST00000618318 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.68
RPRD1B-208ENST00000618318 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.69
RPRD1B-208ENST00000618318 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.69
RPRD1B-208ENST00000618318 RALBP1Q15311 655 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms