RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-205ENST00000617962 NWD1Q149M9 1564 aa37.96■■■■□ 3.67
GADD45A-205ENST00000617962 NKTRP30414 1462 aaKnown RBP37.95■■■■□ 3.67
GADD45A-205ENST00000617962 MYO5BQ9ULV0 1848 aa37.94■■■■□ 3.66
GADD45A-205ENST00000617962 ZFYVE9O95405 1425 aa37.93■■■■□ 3.66
GADD45A-205ENST00000617962 GCC2Q8IWJ2 1684 aa37.92■■■■□ 3.66
GADD45A-205ENST00000617962 ROBO1Q9Y6N7 1651 aa37.92■■■■□ 3.66
GADD45A-205ENST00000617962 RGS17Q9UGC6 210 aaPredicted RBP37.9■■■■□ 3.66
GADD45A-205ENST00000617962 PLEKHG1Q9ULL1 1385 aa37.89■■■■□ 3.66
GADD45A-205ENST00000617962 RIMS2Q9UQ26 1411 aa37.88■■■■□ 3.66
GADD45A-205ENST00000617962 PPP1R15AO75807 674 aaPredicted RBP37.88■■■■□ 3.65
GADD45A-205ENST00000617962 UNC13BO14795 1591 aa37.88■■■■□ 3.65
GADD45A-205ENST00000617962 TMEM131LA2VDJ0 1609 aa37.87■■■■□ 3.65
GADD45A-205ENST00000617962 MSH6P52701 1360 aa37.85■■■■□ 3.65
GADD45A-205ENST00000617962 HDGFP51858 240 aaKnown RBP37.85■■■■□ 3.65
GADD45A-205ENST00000617962 CHGAP10645 457 aaKnown RBP37.81■■■■□ 3.64
GADD45A-205ENST00000617962 CHD2O14647 1828 aaKnown RBP37.81■■■■□ 3.64
GADD45A-205ENST00000617962 E9PCH4 1651 aa37.79■■■■□ 3.64
GADD45A-205ENST00000617962 SLAIN2Q9P270 581 aa37.77■■■■□ 3.64
GADD45A-205ENST00000617962 ROCK1Q13464 1354 aa37.77■■■■□ 3.64
GADD45A-205ENST00000617962 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.75■■■■□ 3.63
GADD45A-205ENST00000617962 TBX22Q9Y458 520 aa37.75■■■■□ 3.63
GADD45A-205ENST00000617962 IQGAP3Q86VI3 1631 aa37.73■■■■□ 3.63
GADD45A-205ENST00000617962 NUTM2DQ5VT03 806 aaPredicted RBP37.73■■■■□ 3.63
GADD45A-205ENST00000617962 PHLPP1O60346 1717 aa37.7■■■■□ 3.63
GADD45A-205ENST00000617962 ADAMTS13Q76LX8 1427 aa37.69■■■■□ 3.62
GADD45A-205ENST00000617962 POTEAQ6S8J7 498 aa37.67■■■■□ 3.62
GADD45A-205ENST00000617962 NUP155O75694 1391 aa37.67■■■■□ 3.62
GADD45A-205ENST00000617962 ITGAEP38570 1179 aa37.66■■■■□ 3.62
GADD45A-205ENST00000617962 NCOA3Q9Y6Q9 1424 aa37.64■■■■□ 3.62
GADD45A-205ENST00000617962 C14orf37Q86TY3 774 aa37.64■■■■□ 3.62
GADD45A-205ENST00000617962 DIP2AQ14689 1571 aa37.63■■■■□ 3.62
GADD45A-205ENST00000617962 JCADQ9P266 1359 aa37.61■■■■□ 3.61
GADD45A-205ENST00000617962 PIK3R4Q99570 1358 aa37.59■■■■□ 3.61
GADD45A-205ENST00000617962 COL16A1Q07092 1604 aaPredicted RBP37.56■■■■□ 3.6
GADD45A-205ENST00000617962 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.56■■■■□ 3.6
GADD45A-205ENST00000617962 TRPM2O94759 1503 aa37.55■■■■□ 3.6
GADD45A-205ENST00000617962 PPARGC1BQ86YN6 1023 aaKnown RBP37.54■■■■□ 3.6
GADD45A-205ENST00000617962 C19orf44Q9H6X5 657 aa37.54■■■■□ 3.6
GADD45A-205ENST00000617962 CADPS2Q86UW7 1296 aa37.53■■■■□ 3.6
GADD45A-205ENST00000617962 ATF3P18847 181 aa37.52■■■■□ 3.6
GADD45A-205ENST00000617962 AMOTL2Q9Y2J4 779 aa37.51■■■■□ 3.6
GADD45A-205ENST00000617962 PTPRUQ92729 1446 aa37.5■■■■□ 3.59
GADD45A-205ENST00000617962 SPHKAPQ2M3C7 1700 aa37.46■■■■□ 3.59
GADD45A-205ENST00000617962 AHDC1Q5TGY3 1603 aaPredicted RBP37.44■■■■□ 3.58
GADD45A-205ENST00000617962 NRXN3Q9Y4C0 1643 aa37.43■■■■□ 3.58
GADD45A-205ENST00000617962 SPATA31A6Q5VVP1 1343 aa37.41■■■■□ 3.58
GADD45A-205ENST00000617962 LRP6O75581 1613 aa37.41■■■■□ 3.58
GADD45A-205ENST00000617962 ZNF326Q5BKZ1 582 aaKnown RBP37.41■■■■□ 3.58
GADD45A-205ENST00000617962 SETBP1Q9Y6X0 1596 aa37.4■■■■□ 3.58
GADD45A-205ENST00000617962 XRN1Q8IZH2 1706 aaKnown RBP37.38■■■■□ 3.57
GADD45A-205ENST00000617962 BRINP3Q76B58 766 aa37.37■■■■□ 3.57
GADD45A-205ENST00000617962 SETD1AO15047 1707 aaKnown RBP37.36■■■■□ 3.57
GADD45A-205ENST00000617962 MEX3CQ5U5Q3 659 aaKnown RBP37.36■■■■□ 3.57
GADD45A-205ENST00000617962 SHPRHQ149N8 1683 aa37.35■■■■□ 3.57
GADD45A-205ENST00000617962 DCCP43146 1447 aa37.34■■■■□ 3.57
GADD45A-205ENST00000617962 METP08581 1390 aa37.32■■■■□ 3.57
GADD45A-205ENST00000617962 CLTCL1P53675 1640 aa37.3■■■■□ 3.56
GADD45A-205ENST00000617962 ASXL1Q8IXJ9 1541 aa37.27■■■■□ 3.56
GADD45A-205ENST00000617962 NEXMIFQ5QGS0 1516 aa37.26■■■■□ 3.56
GADD45A-205ENST00000617962 ZNF772Q68DY9 489 aaPredicted RBP37.26■■■■□ 3.56
GADD45A-205ENST00000617962 MST1RQ04912 1400 aa37.26■■■■□ 3.55
GADD45A-205ENST00000617962 NUTM2BA6NNL0 878 aaPredicted RBP37.22■■■■□ 3.55
GADD45A-205ENST00000617962 NUTM2EB1AL46 878 aaPredicted RBP37.22■■■■□ 3.55
GADD45A-205ENST00000617962 NUTM2AQ8IVF1 878 aaPredicted RBP37.22■■■■□ 3.55
GADD45A-205ENST00000617962 NAIPQ13075 1403 aa37.21■■■■□ 3.55
GADD45A-205ENST00000617962 RRBP1Q9P2E9 1410 aaKnown RBP37.21■■■■□ 3.55
GADD45A-205ENST00000617962 KIF1BO60333 1816 aa37.19■■■■□ 3.54
GADD45A-205ENST00000617962 ADGRL3Q9HAR2 1447 aa37.19■■■■□ 3.54
GADD45A-205ENST00000617962 NHSL1Q5SYE7 1610 aa37.18■■■■□ 3.54
GADD45A-205ENST00000617962 SETD5Q9C0A6 1442 aa37.18■■■■□ 3.54
GADD45A-205ENST00000617962 TRIM52Q96A61 297 aa37.17■■■■□ 3.54
GADD45A-205ENST00000617962 NALCNQ8IZF0 1738 aa37.16■■■■□ 3.54
GADD45A-205ENST00000617962 DDX17Q92841 729 aaKnown RBP37.12■■■■□ 3.53
GADD45A-205ENST00000617962 LRRC59Q96AG4 307 aaKnown RBP37.11■■■■□ 3.53
GADD45A-205ENST00000617962 RXRBP28702 533 aa37.09■■■■□ 3.53
GADD45A-205ENST00000617962 AFF2P51816 1311 aa37.08■■■■□ 3.53
GADD45A-205ENST00000617962 VGFO15240 615 aaPredicted RBP37.07■■■■□ 3.52
GADD45A-205ENST00000617962 UPF1Q92900 1129 aaKnown RBP eCLIP37.04■■■■□ 3.525e-13■■■■□ 20.4
GADD45A-205ENST00000617962 PTCH1Q13635 1447 aa37.03■■■■□ 3.52
GADD45A-205ENST00000617962 PNPLA6Q8IY17 1366 aa37.03■■■■□ 3.52
GADD45A-205ENST00000617962 C1orf167Q5SNV9 1468 aa37.02■■■■□ 3.52
GADD45A-205ENST00000617962 HFM1A2PYH4 1435 aa37.02■■■■□ 3.52
GADD45A-205ENST00000617962 ROBO2Q9HCK4 1378 aa37.01■■■■□ 3.51
GADD45A-205ENST00000617962 SLC4A1APQ9BWU0 796 aaKnown RBP37■■■■□ 3.51
GADD45A-205ENST00000617962 C8orf37Q96NL8 207 aa36.98■■■■□ 3.51
GADD45A-205ENST00000617962 RPGRIP1LQ68CZ1 1315 aa36.98■■■■□ 3.51
GADD45A-205ENST00000617962 CDK12Q9NYV4 1490 aaPredicted RBP36.98■■■■□ 3.51
GADD45A-205ENST00000617962 PPLO60437 1756 aa36.94■■■■□ 3.5
GADD45A-205ENST00000617962 ORAI2Q96SN7 254 aa36.93■■■■□ 3.5
GADD45A-205ENST00000617962 PRAG1Q86YV5 1406 aa36.93■■■■□ 3.5
GADD45A-205ENST00000617962 LAMC1P11047 1609 aa36.92■■■■□ 3.5
GADD45A-205ENST00000617962 QTRT2Q9H974 415 aaKnown RBP36.9■■■■□ 3.5
GADD45A-205ENST00000617962 ADAMTS2O95450 1211 aa36.88■■■■□ 3.49
GADD45A-205ENST00000617962 SOS2Q07890 1332 aaPredicted RBP36.87■■■■□ 3.49
GADD45A-205ENST00000617962 FOXD1Q16676 465 aa36.86■■■■□ 3.49
GADD45A-205ENST00000617962 RBM6P78332 1123 aaKnown RBP36.85■■■■□ 3.49
GADD45A-205ENST00000617962 NGLY1Q96IV0 654 aa36.85■■■■□ 3.49
GADD45A-205ENST00000617962 RGS12O14924 1447 aa36.84■■■■□ 3.49
GADD45A-205ENST00000617962 ADGRF5Q8IZF2 1346 aa36.78■■■■□ 3.48
GADD45A-205ENST00000617962 CCDC144AA2RUR9 1427 aa36.76■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms