RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-205ENST00000617962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.92■■■■□ 3.822e-33■■□□□ 13.6
GADD45A-205ENST00000617962 FTOQ9C0B1 505 aaKnown RBP eCLIP28.75■■■□□ 2.191e-25■■□□□ 12.2
GADD45A-205ENST00000617962 ZNF622Q969S3 477 aaKnown RBP eCLIP32.95■■■□□ 2.873e-15■□□□□ 8.2
GADD45A-205ENST00000617962 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.56■■■□□ 2.328e-15■□□□□ 8.7
GADD45A-205ENST00000617962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.49■■■■□ 3.752e-13■■□□□ 13
GADD45A-205ENST00000617962 UPF1Q92900 1129 aaKnown RBP eCLIP37.04■■■■□ 3.525e-13■■■■□ 20.4
GADD45A-205ENST00000617962 WDR43Q15061 677 aaKnown RBP eCLIP31.96■■■□□ 2.713e-12■■□□□ 14.2
GADD45A-205ENST00000617962 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.09■■□□□ 1.457e-12■□□□□ 10.3
GADD45A-205ENST00000617962 SF3B4Q15427 424 aaKnown RBP eCLIP22.44■■□□□ 1.189e-11■■■■■ 57.2
GADD45A-205ENST00000617962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.9■■□□□ 1.421e-9■■■□□ 17
GADD45A-205ENST00000617962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.45■■□□□ 1.023e-9■■■■□ 25
GADD45A-205ENST00000617962 KHSRPQ92945 711 aaKnown RBP eCLIP28.38■■■□□ 2.133e-9■■□□□ 11.6
GADD45A-205ENST00000617962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.2■■□□□ 1.948e-9■□□□□ 8.2
GADD45A-205ENST00000617962 DDX3XO00571 662 aaKnown RBP eCLIP24.36■■□□□ 1.499e-9■■□□□ 14.5
GADD45A-205ENST00000617962 NCBP2P52298 156 aaKnown RBP eCLIP22.02■■□□□ 1.129e-9■■■■■ 27.5
GADD45A-205ENST00000617962 GTF2F1P35269 517 aaKnown RBP eCLIP28.07■■■□□ 2.081e-8■■□□□ 12.9
GADD45A-205ENST00000617962 PPIGQ13427 754 aaKnown RBP eCLIP29.15■■■□□ 2.262e-8■■□□□ 12.9
GADD45A-205ENST00000617962 AQRO60306 1485 aaKnown RBP eCLIP45.21■■■■■ 4.832e-8■■■■□ 20.7
GADD45A-205ENST00000617962 TIA1P31483 386 aaKnown RBP eCLIP22.04■■□□□ 1.122e-8■□□□□ 8.9
GADD45A-205ENST00000617962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.93■■■■■ 4.143e-8■■□□□ 13.9
GADD45A-205ENST00000617962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.33■■□□□ 1.336e-8■■□□□ 14
GADD45A-205ENST00000617962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.85■■□□□ 1.099e-8■■■□□ 14.9
GADD45A-205ENST00000617962 SRSF1Q07955 248 aaKnown RBP eCLIP24.38■■□□□ 1.492e-7■□□□□ 9.7
GADD45A-205ENST00000617962 ZRANB2O95218 330 aaKnown RBP eCLIP23.76■■□□□ 1.392e-7■■□□□ 13.6
GADD45A-205ENST00000617962 RBM15Q96T37 977 aaKnown RBP eCLIP24.7■■□□□ 1.544e-7■■□□□ 13.9
GADD45A-205ENST00000617962 AKAP1Q92667 903 aaKnown RBP eCLIP21.93■■□□□ 1.15e-7■■■□□ 19
GADD45A-205ENST00000617962 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.13■■■□□ 2.416e-7■■■■□ 22.3
GADD45A-205ENST00000617962 SF3B1O75533 1304 aaKnown RBP eCLIP27.16■■□□□ 1.946e-7■■■■■ 52.3
GADD45A-205ENST00000617962 PUM1Q14671 1186 aaKnown RBP eCLIP26.87■■□□□ 1.896e-7■■□□□ 12.5
GADD45A-205ENST00000617962 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.18■■■□□ 2.266e-7■■■□□ 15
GADD45A-205ENST00000617962 EFTUD2Q15029 972 aaKnown RBP eCLIP22.7■■□□□ 1.221e-6■■■□□ 15.5
GADD45A-205ENST00000617962 PABPC4Q13310 644 aaKnown RBP eCLIP30.17■■■□□ 2.421e-6■■■□□ 16.1
GADD45A-205ENST00000617962 RPS3P23396 243 aaKnown RBP eCLIP23.31■■□□□ 1.321e-6■■■■□ 19.3
GADD45A-205ENST00000617962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.86■■□□□ 1.731e-6■■■■■ 44.9
GADD45A-205ENST00000617962 AATFQ9NY61 560 aaKnown RBP eCLIP30.15■■■□□ 2.421e-6■■■■□ 20.1
GADD45A-205ENST00000617962 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.69■■□□□ 1.384e-6■□□□□ 8.2
GADD45A-205ENST00000617962 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.4■■■□□ 2.34e-6■□□□□ 8.1
GADD45A-205ENST00000617962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.8■■□□□ 1.244e-6■□□□□ 8.2
GADD45A-205ENST00000617962 RBFOX2O43251 390 aaKnown RBP eCLIP18.14■□□□□ 0.494e-6■□□□□ 9
GADD45A-205ENST00000617962 PRPF4O43172 522 aaKnown RBP eCLIP23.31■■□□□ 1.329e-6■□□□□ 10.5
GADD45A-205ENST00000617962 SND1Q7KZF4 910 aaKnown RBP eCLIP25.36■■□□□ 1.659e-6■■□□□ 12.5
Retrieved 41 of 41 RNA–protein pairs in 8.1 ms