RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 ZFYVE9O95405 1425 aa25.48■■□□□ 1.67
LTBP4-235ENST00000617753 PIP4K2BP78356 416 aa25.48■■□□□ 1.67
LTBP4-235ENST00000617753 SLC26A8Q96RN1 970 aa25.47■■□□□ 1.67
LTBP4-235ENST00000617753 HFM1A2PYH4 1435 aa25.46■■□□□ 1.67
LTBP4-235ENST00000617753 SPHKAPQ2M3C7 1700 aa25.45■■□□□ 1.66
LTBP4-235ENST00000617753 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
LTBP4-235ENST00000617753 PLEKHG1Q9ULL1 1385 aa25.44■■□□□ 1.66
LTBP4-235ENST00000617753 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.43■■□□□ 1.66
LTBP4-235ENST00000617753 TRIM52Q96A61 297 aa25.41■■□□□ 1.66
LTBP4-235ENST00000617753 KCNA6P17658 529 aa25.4■■□□□ 1.66
LTBP4-235ENST00000617753 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
LTBP4-235ENST00000617753 NUTM2DQ5VT03 806 aaPredicted RBP25.37■■□□□ 1.65
LTBP4-235ENST00000617753 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
LTBP4-235ENST00000617753 NWD1Q149M9 1564 aa25.35■■□□□ 1.65
LTBP4-235ENST00000617753 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
LTBP4-235ENST00000617753 NKTRP30414 1462 aaKnown RBP25.35■■□□□ 1.65
LTBP4-235ENST00000617753 TMEM94Q12767 1356 aa25.35■■□□□ 1.65
LTBP4-235ENST00000617753 HSPA1LP34931 641 aa25.35■■□□□ 1.65
LTBP4-235ENST00000617753 TRPM2O94759 1503 aa25.34■■□□□ 1.65
LTBP4-235ENST00000617753 PROSER2Q86WR7 435 aaPredicted RBP25.34■■□□□ 1.65
LTBP4-235ENST00000617753 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
LTBP4-235ENST00000617753 SLC4A1APQ9BWU0 796 aaKnown RBP25.32■■□□□ 1.64
LTBP4-235ENST00000617753 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
LTBP4-235ENST00000617753 TBX22Q9Y458 520 aa25.31■■□□□ 1.64
LTBP4-235ENST00000617753 DIP2AQ14689 1571 aa25.31■■□□□ 1.64
LTBP4-235ENST00000617753 CHD2O14647 1828 aaKnown RBP25.29■■□□□ 1.64
LTBP4-235ENST00000617753 ADAMTS13Q76LX8 1427 aa25.29■■□□□ 1.64
LTBP4-235ENST00000617753 RBM33Q96EV2 1170 aaKnown RBP25.28■■□□□ 1.64
LTBP4-235ENST00000617753 KIF1BO60333 1816 aa25.26■■□□□ 1.63
LTBP4-235ENST00000617753 PIK3R4Q99570 1358 aa25.24■■□□□ 1.63
LTBP4-235ENST00000617753 MSH6P52701 1360 aa25.23■■□□□ 1.63
LTBP4-235ENST00000617753 SETBP1Q9Y6X0 1596 aa25.21■■□□□ 1.63
LTBP4-235ENST00000617753 NEXMIFQ5QGS0 1516 aa25.2■■□□□ 1.62
LTBP4-235ENST00000617753 C14orf37Q86TY3 774 aa25.18■■□□□ 1.62
LTBP4-235ENST00000617753 NRXN3Q9Y4C0 1643 aa25.18■■□□□ 1.62
LTBP4-235ENST00000617753 FOXD1Q16676 465 aa25.16■■□□□ 1.62
LTBP4-235ENST00000617753 FAM135BQ49AJ0 1406 aa25.16■■□□□ 1.62
LTBP4-235ENST00000617753 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
LTBP4-235ENST00000617753 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
LTBP4-235ENST00000617753 SETD5Q9C0A6 1442 aa25.14■■□□□ 1.62
LTBP4-235ENST00000617753 NCOA3Q9Y6Q9 1424 aa25.14■■□□□ 1.62
LTBP4-235ENST00000617753 MPHOSPH9Q99550 1183 aa25.14■■□□□ 1.62
LTBP4-235ENST00000617753 PTPRUQ92729 1446 aa25.13■■□□□ 1.61
LTBP4-235ENST00000617753 MED1Q15648 1581 aaPredicted RBP25.13■■□□□ 1.61
LTBP4-235ENST00000617753 ROBO1Q9Y6N7 1651 aa25.12■■□□□ 1.61
LTBP4-235ENST00000617753 CCDC144AA2RUR9 1427 aa25.12■■□□□ 1.61
LTBP4-235ENST00000617753 VGFO15240 615 aaPredicted RBP25.11■■□□□ 1.61
LTBP4-235ENST00000617753 RPGRIP1LQ68CZ1 1315 aa25.1■■□□□ 1.61
LTBP4-235ENST00000617753 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
LTBP4-235ENST00000617753 METP08581 1390 aa25.09■■□□□ 1.61
LTBP4-235ENST00000617753 ILDR2Q71H61 639 aa25.09■■□□□ 1.61
LTBP4-235ENST00000617753 SLAIN2Q9P270 581 aa25.09■■□□□ 1.61
LTBP4-235ENST00000617753 C19orf44Q9H6X5 657 aa25.07■■□□□ 1.6
LTBP4-235ENST00000617753 ATF3P18847 181 aa25.06■■□□□ 1.6
LTBP4-235ENST00000617753 CADPS2Q86UW7 1296 aa25.06■■□□□ 1.6
LTBP4-235ENST00000617753 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.05■■□□□ 1.6
LTBP4-235ENST00000617753 PPLO60437 1756 aa25.05■■□□□ 1.6
LTBP4-235ENST00000617753 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
LTBP4-235ENST00000617753 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
LTBP4-235ENST00000617753 RGL3Q3MIN7 710 aa25.01■■□□□ 1.59
LTBP4-235ENST00000617753 DCCP43146 1447 aa24.99■■□□□ 1.59
LTBP4-235ENST00000617753 SPATA31E1Q6ZUB1 1445 aa24.99■■□□□ 1.59
LTBP4-235ENST00000617753 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
LTBP4-235ENST00000617753 PHLPP1O60346 1717 aa24.98■■□□□ 1.59
LTBP4-235ENST00000617753 ANKRD30BQ9BXX2 1392 aa24.95■■□□□ 1.59
LTBP4-235ENST00000617753 PTCH1Q13635 1447 aa24.95■■□□□ 1.58
LTBP4-235ENST00000617753 ADGRL3Q9HAR2 1447 aa24.95■■□□□ 1.58
LTBP4-235ENST00000617753 ADGRF5Q8IZF2 1346 aa24.93■■□□□ 1.58
LTBP4-235ENST00000617753 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
LTBP4-235ENST00000617753 NALCNQ8IZF0 1738 aa24.91■■□□□ 1.58
LTBP4-235ENST00000617753 SOCS7O14512 581 aa24.9■■□□□ 1.58
LTBP4-235ENST00000617753 ROBO2Q9HCK4 1378 aa24.9■■□□□ 1.58
LTBP4-235ENST00000617753 COL16A1Q07092 1604 aaPredicted RBP24.89■■□□□ 1.57
LTBP4-235ENST00000617753 JCADQ9P266 1359 aa24.89■■□□□ 1.57
LTBP4-235ENST00000617753 MST1RQ04912 1400 aa24.88■■□□□ 1.57
LTBP4-235ENST00000617753 PRAG1Q86YV5 1406 aa24.88■■□□□ 1.57
LTBP4-235ENST00000617753 AHDC1Q5TGY3 1603 aaPredicted RBP24.88■■□□□ 1.57
LTBP4-235ENST00000617753 BRINP3Q76B58 766 aa24.88■■□□□ 1.57
LTBP4-235ENST00000617753 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
LTBP4-235ENST00000617753 PIK3C2GO75747 1445 aa24.85■■□□□ 1.57
LTBP4-235ENST00000617753 HRCP23327 699 aa24.84■■□□□ 1.57
LTBP4-235ENST00000617753 STK26Q9P289 416 aa24.81■■□□□ 1.56
LTBP4-235ENST00000617753 MYOM2P54296 1465 aa24.8■■□□□ 1.56
LTBP4-235ENST00000617753 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
LTBP4-235ENST00000617753 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
LTBP4-235ENST00000617753 NHSL1Q5SYE7 1610 aa24.78■■□□□ 1.56
LTBP4-235ENST00000617753 TECPR2O15040 1411 aa24.78■■□□□ 1.56
LTBP4-235ENST00000617753 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
LTBP4-235ENST00000617753 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
LTBP4-235ENST00000617753 SHPRHQ149N8 1683 aa24.76■■□□□ 1.55
LTBP4-235ENST00000617753 NRXN1Q9ULB1 1477 aa24.76■■□□□ 1.55
LTBP4-235ENST00000617753 LAMC1P11047 1609 aa24.75■■□□□ 1.55
LTBP4-235ENST00000617753 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
LTBP4-235ENST00000617753 ABCC11Q96J66 1382 aa24.75■■□□□ 1.55
LTBP4-235ENST00000617753 YTHDC2Q9H6S0 1430 aaKnown RBP24.75■■□□□ 1.55
LTBP4-235ENST00000617753 C14orf93Q9H972 538 aaKnown RBP24.74■■□□□ 1.55
LTBP4-235ENST00000617753 RGS17Q9UGC6 210 aaPredicted RBP24.74■■□□□ 1.55
LTBP4-235ENST00000617753 CDC42BPGQ6DT37 1551 aa24.73■■□□□ 1.55
LTBP4-235ENST00000617753 WAPLQ7Z5K2 1190 aa24.72■■□□□ 1.55
LTBP4-235ENST00000617753 CFAP70Q5T0N1 1121 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms