RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 KDM5AP29375 1690 aaKnown RBP29.06■■■□□ 2.24
SDHA-220ENST00000617470 MIER1Q8N108 512 aa29.04■■■□□ 2.24
SDHA-220ENST00000617470 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
SDHA-220ENST00000617470 TMEM2Q9UHN6 1383 aa29.03■■■□□ 2.24
SDHA-220ENST00000617470 AEBP2Q6ZN18 517 aaPredicted RBP29.03■■■□□ 2.24
SDHA-220ENST00000617470 RIMS2Q9UQ26 1411 aa29.03■■■□□ 2.24
SDHA-220ENST00000617470 HSPA2P54652 639 aa29.01■■■□□ 2.23
SDHA-220ENST00000617470 SENP3Q9H4L4 574 aaPredicted RBP29.01■■■□□ 2.23
SDHA-220ENST00000617470 LMTK3Q96Q04 1460 aa29■■■□□ 2.23
SDHA-220ENST00000617470 HDGFP51858 240 aaKnown RBP28.99■■■□□ 2.23
SDHA-220ENST00000617470 HIRIP3Q9BW71 556 aaPredicted RBP28.99■■■□□ 2.23
SDHA-220ENST00000617470 NEXMIFQ5QGS0 1516 aa28.99■■■□□ 2.23
SDHA-220ENST00000617470 NBPF8Q3BBV2 869 aa28.99■■■□□ 2.23
SDHA-220ENST00000617470 EID1Q9Y6B2 187 aa28.99■■■□□ 2.23
SDHA-220ENST00000617470 TXNDC2Q86VQ3 553 aa28.98■■■□□ 2.23
SDHA-220ENST00000617470 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.97■■■□□ 2.23
SDHA-220ENST00000617470 VGFO15240 615 aaPredicted RBP28.97■■■□□ 2.23
SDHA-220ENST00000617470 ZFYVE9O95405 1425 aa28.96■■■□□ 2.23
SDHA-220ENST00000617470 PPLO60437 1756 aa28.96■■■□□ 2.23
SDHA-220ENST00000617470 SLIT1O75093 1534 aa28.95■■■□□ 2.23
SDHA-220ENST00000617470 LTKP29376 864 aa28.95■■■□□ 2.22
SDHA-220ENST00000617470 ADGRF5Q8IZF2 1346 aa28.94■■■□□ 2.22
SDHA-220ENST00000617470 ARHGAP23Q9P227 1491 aa28.94■■■□□ 2.22
SDHA-220ENST00000617470 IFT172Q9UG01 1749 aa28.94■■■□□ 2.22
SDHA-220ENST00000617470 ANKLE2Q86XL3 938 aa28.93■■■□□ 2.22
SDHA-220ENST00000617470 BCANQ96GW7 911 aa28.92■■■□□ 2.22
SDHA-220ENST00000617470 STAC3Q96MF2 364 aa28.92■■■□□ 2.22
SDHA-220ENST00000617470 MYOM2P54296 1465 aa28.9■■■□□ 2.22
SDHA-220ENST00000617470 SCAF11Q99590 1463 aaKnown RBP28.89■■■□□ 2.22
SDHA-220ENST00000617470 NCKAP5LQ9HCH0 1330 aa28.88■■■□□ 2.21
SDHA-220ENST00000617470 PRAG1Q86YV5 1406 aa28.85■■■□□ 2.21
SDHA-220ENST00000617470 HSPA5P11021 654 aaKnown RBP28.84■■■□□ 2.21
SDHA-220ENST00000617470 PLEKHG1Q9ULL1 1385 aa28.82■■■□□ 2.2
SDHA-220ENST00000617470 PIK3C2GO75747 1445 aa28.81■■■□□ 2.2
SDHA-220ENST00000617470 NRXN1Q9ULB1 1477 aa28.81■■■□□ 2.2
SDHA-220ENST00000617470 DDX10Q13206 875 aaKnown RBP28.8■■■□□ 2.2
SDHA-220ENST00000617470 CFAP70Q5T0N1 1121 aa28.79■■■□□ 2.2
SDHA-220ENST00000617470 POLR1AO95602 1720 aaPredicted RBP28.79■■■□□ 2.2
SDHA-220ENST00000617470 EIF4G2P78344 907 aaKnown RBP eCLIP28.79■■■□□ 2.2
SDHA-220ENST00000617470 SLC26A8Q96RN1 970 aa28.77■■■□□ 2.2
SDHA-220ENST00000617470 NPHP4O75161 1426 aaPredicted RBP28.77■■■□□ 2.2
SDHA-220ENST00000617470 C14orf93Q9H972 538 aaKnown RBP28.74■■■□□ 2.19
SDHA-220ENST00000617470 IQGAP1P46940 1657 aa28.74■■■□□ 2.19
SDHA-220ENST00000617470 SETBP1Q9Y6X0 1596 aa28.73■■■□□ 2.19
SDHA-220ENST00000617470 NBPF1Q3BBV0 1214 aa28.72■■■□□ 2.19
SDHA-220ENST00000617470 MED14O60244 1454 aa28.72■■■□□ 2.19
SDHA-220ENST00000617470 NRXN3Q9Y4C0 1643 aa28.71■■■□□ 2.19
SDHA-220ENST00000617470 ALKQ9UM73 1620 aa28.71■■■□□ 2.19
SDHA-220ENST00000617470 STRCQ7RTU9 1775 aa28.7■■■□□ 2.19
SDHA-220ENST00000617470 ROCK2O75116 1388 aaKnown RBP28.7■■■□□ 2.19
SDHA-220ENST00000617470 RALGAPBQ86X10 1494 aa28.7■■■□□ 2.18
SDHA-220ENST00000617470 ADAMTS13Q76LX8 1427 aa28.7■■■□□ 2.18
SDHA-220ENST00000617470 TMEM132EQ6IEE7 984 aa28.7■■■□□ 2.18
SDHA-220ENST00000617470 TRPM1Q7Z4N2 1603 aa28.69■■■□□ 2.18
SDHA-220ENST00000617470 WASHC2AQ641Q2 1341 aa28.67■■■□□ 2.18
SDHA-220ENST00000617470 LAMC1P11047 1609 aa28.66■■■□□ 2.18
SDHA-220ENST00000617470 TBX22Q9Y458 520 aa28.66■■■□□ 2.18
SDHA-220ENST00000617470 CARD11Q9BXL7 1154 aa28.65■■■□□ 2.18
SDHA-220ENST00000617470 KIAA1210Q9ULL0 1709 aa28.65■■■□□ 2.18
SDHA-220ENST00000617470 METP08581 1390 aa28.64■■■□□ 2.18
SDHA-220ENST00000617470 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
SDHA-220ENST00000617470 STK26Q9P289 416 aa28.62■■■□□ 2.17
SDHA-220ENST00000617470 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
SDHA-220ENST00000617470 DMRT2Q9Y5R5 561 aa28.61■■■□□ 2.17
SDHA-220ENST00000617470 SETD1AO15047 1707 aaKnown RBP28.61■■■□□ 2.17
SDHA-220ENST00000617470 USP47Q96K76 1375 aa28.59■■■□□ 2.17
SDHA-220ENST00000617470 ASXL1Q8IXJ9 1541 aa28.59■■■□□ 2.17
SDHA-220ENST00000617470 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
SDHA-220ENST00000617470 GPRASP1Q5JY77 1395 aa28.57■■■□□ 2.16
SDHA-220ENST00000617470 TRAK1Q9UPV9 953 aa28.56■■■□□ 2.16
SDHA-220ENST00000617470 CCDC7Q96M83 1385 aa28.55■■■□□ 2.16
SDHA-220ENST00000617470 YTHDC2Q9H6S0 1430 aaKnown RBP28.55■■■□□ 2.16
SDHA-220ENST00000617470 AMOTL2Q9Y2J4 779 aa28.53■■■□□ 2.16
SDHA-220ENST00000617470 PTPRUQ92729 1446 aa28.52■■■□□ 2.16
SDHA-220ENST00000617470 YTHDC1Q96MU7 727 aaKnown RBP28.52■■■□□ 2.16
SDHA-220ENST00000617470 PIK3R4Q99570 1358 aa28.52■■■□□ 2.16
SDHA-220ENST00000617470 LRPPRCP42704 1394 aaKnown RBP28.51■■■□□ 2.15
SDHA-220ENST00000617470 KIF7Q2M1P5 1343 aa28.48■■■□□ 2.15
SDHA-220ENST00000617470 KCNA6P17658 529 aa28.47■■■□□ 2.15
SDHA-220ENST00000617470 ABCC11Q96J66 1382 aa28.46■■■□□ 2.15
SDHA-220ENST00000617470 CHD2O14647 1828 aaKnown RBP28.45■■■□□ 2.14
SDHA-220ENST00000617470 EIF3AQ14152 1382 aaKnown RBP28.44■■■□□ 2.14
SDHA-220ENST00000617470 ZNF335Q9H4Z2 1342 aaPredicted RBP28.44■■■□□ 2.14
SDHA-220ENST00000617470 SAFB2Q14151 953 aaKnown RBP eCLIP28.44■■■□□ 2.143e-7■□□□□ 9.3
SDHA-220ENST00000617470 POGKQ9P215 609 aa28.44■■■□□ 2.14
SDHA-220ENST00000617470 PRAM1Q96QH2 718 aa28.43■■■□□ 2.14
SDHA-220ENST00000617470 CENPBP07199 599 aaPredicted RBP28.42■■■□□ 2.14
SDHA-220ENST00000617470 WAPLQ7Z5K2 1190 aa28.42■■■□□ 2.14
SDHA-220ENST00000617470 ROBO2Q9HCK4 1378 aa28.42■■■□□ 2.14
SDHA-220ENST00000617470 XRN1Q8IZH2 1706 aaKnown RBP28.41■■■□□ 2.14
SDHA-220ENST00000617470 ST20-MTHFSA0A0A6YYL1 179 aa28.41■■■□□ 2.14
SDHA-220ENST00000617470 ANP32CO43423 234 aa28.41■■■□□ 2.14
SDHA-220ENST00000617470 TECPR2O15040 1411 aa28.4■■■□□ 2.14
SDHA-220ENST00000617470 KNDC1Q76NI1 1749 aa28.39■■■□□ 2.13
SDHA-220ENST00000617470 ARHGEF28Q8N1W1 1705 aaKnown RBP28.39■■■□□ 2.13
SDHA-220ENST00000617470 CENPJQ9HC77 1338 aaPredicted RBP28.38■■■□□ 2.13
SDHA-220ENST00000617470 CPS1P31327 1500 aa28.38■■■□□ 2.13
SDHA-220ENST00000617470 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
SDHA-220ENST00000617470 DLC1Q96QB1 1528 aa28.37■■■□□ 2.13
SDHA-220ENST00000617470 PROSER2Q86WR7 435 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms